Gene annotation
Transcriptome id Sobic.005G102500.2,Sobic.005G102500.1
Synonym Sb05g009053
Functional annotation expressed protein
UniProt A0A1Z5RIB8 , A0A1B6PRE8
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT3G48480 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os11g10780.1 : expressed protein
MaizeGDB (Corn) Zm00025a029642
Brachypodium KQJ88960 , PNT63922 , PNT63920 , PNT63925 , PNT63923
Barley HORVU4Hr1G016620.10 , HORVU4Hr1G016620.5 , HORVU4Hr1G016620.4 , HORVU4Hr1G016620.7 , HORVU4Hr1G016620.6 , HORVU4Hr1G016620.1 , HORVU4Hr1G016620.3 , HORVU4Hr1G016620.2 , HORVU4Hr1G016620.9 , HORVU4Hr1G016620.8
Wheat TraesCS4A02G202900 , TraesCS4B02G106900 , TraesCS4D02G103800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
2 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
3 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
4 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
5 Sobic.002G423800 trafficking protein particle complex subunit, putative, expressed -
6 Sobic.004G010700 expressed protein -
7 Sobic.004G318200 expressed protein -
8 Sobic.001G149600 CS domain containing protein, putative, expressed -
9 Sobic.008G111700 expressed protein -
10 Sobic.004G353500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
11 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
12 Sobic.003G128300 NEDD8-activating enzyme E1 catalytic subunit, putative, expressed K10686: UBE1C, ubiquitin-activating enzyme E1 C
13 Sobic.010G260400 rpp14 family protein, expressed K03537: ribonuclease P/MRP protein subunit POP5
14 Sobic.009G191600 tesmin/TSO1-like CXC domain containing protein, expressed -
15 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
16 Sobic.008G118300 expressed protein -
17 Sobic.009G086200 ubiquitin-conjugating enzyme E2 O, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
18 Sobic.009G258500 notchless protein, putative, expressed K14855: RSA4, ribosome assembly protein 4
19 Sobic.001G285300 expressed protein -
20 Sobic.003G152700 craniofacial development protein 1, putative, expressed -


Gene co-expression network
sample Sobic005G102500 Sobic005G102500 Sobic003G148900 Sobic003G148900 Sobic005G102500--Sobic003G148900 Sobic003G031200 Sobic003G031200 Sobic005G102500--Sobic003G031200 Sobic010G059700 Sobic010G059700 Sobic005G102500--Sobic010G059700 Sobic002G306600 Sobic002G306600 Sobic005G102500--Sobic002G306600 Sobic002G423800 Sobic002G423800 Sobic005G102500--Sobic002G423800 Sobic004G010700 Sobic004G010700 Sobic005G102500--Sobic004G010700 Sobic004G318200 Sobic004G318200 Sobic005G102500--Sobic004G318200 Sobic001G149600 Sobic001G149600 Sobic005G102500--Sobic001G149600 Sobic008G111700 Sobic008G111700 Sobic005G102500--Sobic008G111700 Sobic003G200600 Sobic003G200600 Sobic003G148900--Sobic003G200600 Sobic007G117800 Sobic007G117800 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic007G012900 Sobic007G012900 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic010G088300 Sobic010G088300 Sobic003G031200--Sobic010G088300 Sobic004G242100 Sobic004G242100 Sobic003G031200--Sobic004G242100 Sobic002G359900 Sobic002G359900 Sobic003G031200--Sobic002G359900 Sobic003G031200--Sobic008G111700 Sobic002G129200 Sobic002G129200 Sobic003G031200--Sobic002G129200 Sobic002G044000 Sobic002G044000 Sobic003G031200--Sobic002G044000 Sobic003G043400 Sobic003G043400 Sobic003G031200--Sobic003G043400 Sobic001G402600 Sobic001G402600 Sobic003G031200--Sobic001G402600 Sobic001G285300 Sobic001G285300 Sobic003G031200--Sobic001G285300 Sobic007G036800 Sobic007G036800 Sobic010G059700--Sobic007G036800 Sobic010G059700--Sobic002G306600 Sobic009G063800 Sobic009G063800 Sobic010G059700--Sobic009G063800 Sobic010G059700--Sobic003G224300 Sobic007G146600 Sobic007G146600 Sobic010G059700--Sobic007G146600 Sobic003G222700 Sobic003G222700 Sobic010G059700--Sobic003G222700 Sobic010G059700--Sobic003G148900 Sobic004G145600 Sobic004G145600 Sobic010G059700--Sobic004G145600 Sobic007G022700 Sobic007G022700 Sobic010G059700--Sobic007G022700 Sobic003G004600 Sobic003G004600 Sobic002G306600--Sobic003G004600 Sobic002G306600--Sobic010G059700 Sobic001G458200 Sobic001G458200 Sobic002G306600--Sobic001G458200 Sobic002G306600--Sobic003G128300 Sobic001G157600 Sobic001G157600 Sobic002G306600--Sobic001G157600 Sobic003G221500 Sobic003G221500 Sobic002G306600--Sobic003G221500 Sobic002G267400 Sobic002G267400 Sobic002G306600--Sobic002G267400 Sobic001G487100 Sobic001G487100 Sobic002G306600--Sobic001G487100 Sobic004G088700 Sobic004G088700 Sobic002G306600--Sobic004G088700 Sobic002G423800--Sobic003G043400 Sobic006G211800 Sobic006G211800 Sobic002G423800--Sobic006G211800 Sobic001G010700 Sobic001G010700 Sobic002G423800--Sobic001G010700 Sobic001G444300 Sobic001G444300 Sobic002G423800--Sobic001G444300 Sobic002G428200 Sobic002G428200 Sobic002G423800--Sobic002G428200 Sobic001G542900 Sobic001G542900 Sobic002G423800--Sobic001G542900 Sobic006G252200 Sobic006G252200 Sobic002G423800--Sobic006G252200 Sobic008G145100 Sobic008G145100 Sobic002G423800--Sobic008G145100 Sobic007G176200 Sobic007G176200 Sobic002G423800--Sobic007G176200 Sobic009G201800 Sobic009G201800 Sobic004G010700--Sobic009G201800 Sobic009G258500 Sobic009G258500 Sobic004G010700--Sobic009G258500 Sobic002G054000 Sobic002G054000 Sobic004G010700--Sobic002G054000 Sobic002G101000 Sobic002G101000 Sobic004G010700--Sobic002G101000 Sobic002G277200 Sobic002G277200 Sobic004G010700--Sobic002G277200 Sobic006G129900 Sobic006G129900 Sobic004G010700--Sobic006G129900 Sobic001G382200 Sobic001G382200 Sobic004G010700--Sobic001G382200 Sobic009G234400 Sobic009G234400 Sobic004G010700--Sobic009G234400 Sobic009G104100 Sobic009G104100 Sobic004G010700--Sobic009G104100 Sobic003G428200 Sobic003G428200 Sobic004G318200--Sobic003G428200 Sobic003G126800 Sobic003G126800 Sobic004G318200--Sobic003G126800 Sobic007G004200 Sobic007G004200 Sobic004G318200--Sobic007G004200 Sobic004G297300 Sobic004G297300 Sobic004G318200--Sobic004G297300 Sobic004G318200--Sobic003G043400 Sobic009G117200 Sobic009G117200 Sobic004G318200--Sobic009G117200 Sobic003G252900 Sobic003G252900 Sobic004G318200--Sobic003G252900 Sobic004G335000 Sobic004G335000 Sobic004G318200--Sobic004G335000 Sobic004G318200--Sobic005G102500 Sobic006G231700 Sobic006G231700 Sobic001G149600--Sobic006G231700 Sobic006G149200 Sobic006G149200 Sobic001G149600--Sobic006G149200 Sobic007G163700 Sobic007G163700 Sobic001G149600--Sobic007G163700 Sobic003G358300 Sobic003G358300 Sobic001G149600--Sobic003G358300 Sobic002G257400 Sobic002G257400 Sobic001G149600--Sobic002G257400 Sobic001G149600--Sobic004G297300 Sobic001G412500 Sobic001G412500 Sobic001G149600--Sobic001G412500 Sobic006G013900 Sobic006G013900 Sobic001G149600--Sobic006G013900 Sobic001G066700 Sobic001G066700 Sobic001G149600--Sobic001G066700 Sobic008G111700--Sobic001G285300 Sobic003G038600 Sobic003G038600 Sobic008G111700--Sobic003G038600 Sobic001G448200 Sobic001G448200 Sobic008G111700--Sobic001G448200 Sobic001G349400 Sobic001G349400 Sobic008G111700--Sobic001G349400 Sobic003G247900 Sobic003G247900 Sobic008G111700--Sobic003G247900 Sobic008G111700--Sobic003G031200 Sobic008G111700--Sobic003G043400 Sobic006G094600 Sobic006G094600 Sobic008G111700--Sobic006G094600 Sobic006G261100 Sobic006G261100 Sobic008G111700--Sobic006G261100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.