Gene annotation
Transcriptome id Sobic.004G318200.1
Synonym Sb04g034910
Functional annotation expressed protein
UniProt C5XTL7
Pfam PF02431
Panther DB PTHR28039 PTHR28039:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016872; intramolecular lyase activity


Orthologs (automatic annotation)
TAIR AT2G26310 : Chalcone-flavanone isomerase family protein
RAP-DB (Rice) LOC_Os02g53810.1 : expressed protein
MaizeGDB (Corn) Zm00025a033031 , Zm00025a022344
Brachypodium KQK01628
Barley HORVU6Hr1G081470.2 , HORVU6Hr1G081470.3 , HORVU6Hr1G081470.6 , HORVU6Hr1G081470.7 , HORVU6Hr1G081470.4 , HORVU6Hr1G081470.5 , HORVU6Hr1G081470.9 , HORVU6Hr1G081470.10 , HORVU6Hr1G081470.11 , HORVU6Hr1G081470.12 , HORVU6Hr1G081470.13 , HORVU6Hr1G081470.14 , HORVU6Hr1G081470.15 , HORVU6Hr1G081470.16 , HORVU6Hr1G081470.17
Wheat TraesCS6A02G337200 , TraesCS6D02G317800 , TraesCS6B02G367900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
2 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
3 Sobic.007G004200 PHD-finger domain containing protein, putative, expressed -
4 Sobic.004G297300 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
5 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
6 Sobic.009G117200 expressed protein -
7 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
8 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
9 Sobic.005G102500 expressed protein -
10 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
11 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
12 Sobic.002G428200 26S protease regulatory subunit 4, putative, expressed K03062: PSMC1, 26S proteasome regulatory subunit T2
13 Sobic.003G312400 dymeclin, putative, expressed -
14 Sobic.004G204800 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
15 Sobic.002G194800 expressed protein -
16 Sobic.006G220900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
17 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
18 Sobic.001G444300 expressed protein -
19 Sobic.009G156500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytoplasmic membrane protein, putative, expressed -
20 Sobic.007G196500 SAM domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G318200 Sobic004G318200 Sobic003G428200 Sobic003G428200 Sobic004G318200--Sobic003G428200 Sobic003G126800 Sobic003G126800 Sobic004G318200--Sobic003G126800 Sobic007G004200 Sobic007G004200 Sobic004G318200--Sobic007G004200 Sobic004G297300 Sobic004G297300 Sobic004G318200--Sobic004G297300 Sobic003G043400 Sobic003G043400 Sobic004G318200--Sobic003G043400 Sobic009G117200 Sobic009G117200 Sobic004G318200--Sobic009G117200 Sobic003G252900 Sobic003G252900 Sobic004G318200--Sobic003G252900 Sobic004G335000 Sobic004G335000 Sobic004G318200--Sobic004G335000 Sobic005G102500 Sobic005G102500 Sobic004G318200--Sobic005G102500 Sobic003G428200--Sobic009G117200 Sobic004G204800 Sobic004G204800 Sobic003G428200--Sobic004G204800 Sobic001G010700 Sobic001G010700 Sobic003G428200--Sobic001G010700 Sobic009G139800 Sobic009G139800 Sobic003G428200--Sobic009G139800 Sobic007G076300 Sobic007G076300 Sobic003G428200--Sobic007G076300 Sobic001G109300 Sobic001G109300 Sobic003G428200--Sobic001G109300 Sobic009G093200 Sobic009G093200 Sobic003G428200--Sobic009G093200 Sobic002G257400 Sobic002G257400 Sobic003G428200--Sobic002G257400 Sobic007G176200 Sobic007G176200 Sobic003G428200--Sobic007G176200 Sobic008G058700 Sobic008G058700 Sobic003G126800--Sobic008G058700 Sobic003G126800--Sobic003G252900 Sobic010G088300 Sobic010G088300 Sobic003G126800--Sobic010G088300 Sobic003G031200 Sobic003G031200 Sobic003G126800--Sobic003G031200 Sobic009G070200 Sobic009G070200 Sobic003G126800--Sobic009G070200 Sobic003G126800--Sobic004G297300 Sobic003G358300 Sobic003G358300 Sobic003G126800--Sobic003G358300 Sobic001G066700 Sobic001G066700 Sobic003G126800--Sobic001G066700 Sobic003G039200 Sobic003G039200 Sobic003G126800--Sobic003G039200 Sobic003G021200 Sobic003G021200 Sobic007G004200--Sobic003G021200 Sobic001G542900 Sobic001G542900 Sobic007G004200--Sobic001G542900 Sobic007G004200--Sobic004G335000 Sobic002G177700 Sobic002G177700 Sobic007G004200--Sobic002G177700 Sobic001G315500 Sobic001G315500 Sobic007G004200--Sobic001G315500 Sobic007G004200--Sobic001G010700 Sobic010G213200 Sobic010G213200 Sobic007G004200--Sobic010G213200 Sobic006G252200 Sobic006G252200 Sobic007G004200--Sobic006G252200 Sobic007G196500 Sobic007G196500 Sobic007G004200--Sobic007G196500 Sobic004G297300--Sobic003G358300 Sobic003G362400 Sobic003G362400 Sobic004G297300--Sobic003G362400 Sobic009G117900 Sobic009G117900 Sobic004G297300--Sobic009G117900 Sobic004G166500 Sobic004G166500 Sobic004G297300--Sobic004G166500 Sobic004G138800 Sobic004G138800 Sobic004G297300--Sobic004G138800 Sobic003G072300 Sobic003G072300 Sobic004G297300--Sobic003G072300 Sobic001G483100 Sobic001G483100 Sobic004G297300--Sobic001G483100 Sobic006G222400 Sobic006G222400 Sobic004G297300--Sobic006G222400 Sobic004G297300--Sobic001G066700 Sobic002G423800 Sobic002G423800 Sobic003G043400--Sobic002G423800 Sobic003G043400--Sobic001G010700 Sobic002G428200 Sobic002G428200 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic003G043400--Sobic004G335000 Sobic007G152400 Sobic007G152400 Sobic003G043400--Sobic007G152400 Sobic003G043400--Sobic006G222400 Sobic001G206700 Sobic001G206700 Sobic009G117200--Sobic001G206700 Sobic004G056400 Sobic004G056400 Sobic009G117200--Sobic004G056400 Sobic009G117200--Sobic003G428200 Sobic004G344800 Sobic004G344800 Sobic009G117200--Sobic004G344800 Sobic001G073600 Sobic001G073600 Sobic009G117200--Sobic001G073600 Sobic009G211900 Sobic009G211900 Sobic009G117200--Sobic009G211900 Sobic003G096000 Sobic003G096000 Sobic009G117200--Sobic003G096000 Sobic002G309700 Sobic002G309700 Sobic009G117200--Sobic002G309700 Sobic006G013000 Sobic006G013000 Sobic009G117200--Sobic006G013000 Sobic003G252900--Sobic008G058700 Sobic003G312400 Sobic003G312400 Sobic003G252900--Sobic003G312400 Sobic003G252900--Sobic003G126800 Sobic003G319000 Sobic003G319000 Sobic003G252900--Sobic003G319000 Sobic003G410400 Sobic003G410400 Sobic003G252900--Sobic003G410400 Sobic001G294600 Sobic001G294600 Sobic003G252900--Sobic001G294600 Sobic006G129000 Sobic006G129000 Sobic003G252900--Sobic006G129000 Sobic009G182200 Sobic009G182200 Sobic003G252900--Sobic009G182200 Sobic003G252900--Sobic010G088300 Sobic004G335000--Sobic002G428200 Sobic004G335000--Sobic007G176200 Sobic004G335000--Sobic001G010700 Sobic004G335000--Sobic002G257400 Sobic004G335000--Sobic006G252200 Sobic001G236300 Sobic001G236300 Sobic004G335000--Sobic001G236300 Sobic001G461900 Sobic001G461900 Sobic004G335000--Sobic001G461900 Sobic001G058100 Sobic001G058100 Sobic004G335000--Sobic001G058100 Sobic007G045600 Sobic007G045600 Sobic004G335000--Sobic007G045600 Sobic003G148900 Sobic003G148900 Sobic005G102500--Sobic003G148900 Sobic005G102500--Sobic003G031200 Sobic010G059700 Sobic010G059700 Sobic005G102500--Sobic010G059700 Sobic002G306600 Sobic002G306600 Sobic005G102500--Sobic002G306600 Sobic005G102500--Sobic002G423800 Sobic004G010700 Sobic004G010700 Sobic005G102500--Sobic004G010700 Sobic005G102500--Sobic004G318200 Sobic001G149600 Sobic001G149600 Sobic005G102500--Sobic001G149600 Sobic008G111700 Sobic008G111700 Sobic005G102500--Sobic008G111700
Octagon: transcription factors


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