Gene annotation
Transcriptome id Sobic.009G156500.1
Synonym Sb09g021980
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
cytoplasmic membrane protein, putative, expressed
UniProt C5YYU4
Pfam PF09835
Panther DB PTHR35102
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G33490 : -
RAP-DB (Rice) LOC_Os05g01510.2 : cytoplasmic membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a043840 , Zm00025a034787
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G261800 expressed protein -
2 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
3 Sobic.007G023400 succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit
4 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
5 Sobic.010G032600 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
6 Sobic.009G132800 methyl-binding domain protein MBD, putative, expressed -
7 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
8 Sobic.006G276700 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
9 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
10 Sobic.010G040900 trafficking protein particle complex subunit 4, putative, expressed -
11 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
12 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
13 Sobic.002G177700 acetyltransferase type B catalytic subunit, putative, expressed K11303: HAT1, histone acetyltransferase 1
14 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
15 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
16 Sobic.009G117200 expressed protein -
17 Sobic.001G206700 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
18 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
19 Sobic.004G318200 expressed protein -
20 Sobic.001G538500 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic009G156500 Sobic009G156500 Sobic003G261800 Sobic003G261800 Sobic009G156500--Sobic003G261800 Sobic009G191400 Sobic009G191400 Sobic009G156500--Sobic009G191400 Sobic007G023400 Sobic007G023400 Sobic009G156500--Sobic007G023400 Sobic002G396700 Sobic002G396700 Sobic009G156500--Sobic002G396700 Sobic010G032600 Sobic010G032600 Sobic009G156500--Sobic010G032600 Sobic009G132800 Sobic009G132800 Sobic009G156500--Sobic009G132800 Sobic001G073600 Sobic001G073600 Sobic009G156500--Sobic001G073600 Sobic006G276700 Sobic006G276700 Sobic009G156500--Sobic006G276700 Sobic004G347600 Sobic004G347600 Sobic009G156500--Sobic004G347600 Sobic002G141700 Sobic002G141700 Sobic003G261800--Sobic002G141700 Sobic001G443200 Sobic001G443200 Sobic003G261800--Sobic001G443200 Sobic003G261800--Sobic004G347600 Sobic010G040900 Sobic010G040900 Sobic003G261800--Sobic010G040900 Sobic003G261800--Sobic009G191400 Sobic001G112400 Sobic001G112400 Sobic003G261800--Sobic001G112400 Sobic001G387800 Sobic001G387800 Sobic003G261800--Sobic001G387800 Sobic004G000100 Sobic004G000100 Sobic003G261800--Sobic004G000100 Sobic004G344800 Sobic004G344800 Sobic003G261800--Sobic004G344800 Sobic009G191400--Sobic001G073600 Sobic009G224400 Sobic009G224400 Sobic009G191400--Sobic009G224400 Sobic009G191400--Sobic004G347600 Sobic007G119600 Sobic007G119600 Sobic009G191400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G191400--Sobic003G135600 Sobic009G191400--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic009G191400--Sobic002G262200 Sobic001G458800 Sobic001G458800 Sobic009G191400--Sobic001G458800 Sobic009G191400--Sobic002G396700 Sobic002G395000 Sobic002G395000 Sobic007G023400--Sobic002G395000 Sobic007G023400--Sobic010G032600 Sobic007G023400--Sobic009G224400 Sobic007G171500 Sobic007G171500 Sobic007G023400--Sobic007G171500 Sobic004G297700 Sobic004G297700 Sobic007G023400--Sobic004G297700 Sobic007G023400--Sobic003G135600 Sobic004G202100 Sobic004G202100 Sobic007G023400--Sobic004G202100 Sobic002G217500 Sobic002G217500 Sobic007G023400--Sobic002G217500 Sobic007G023400--Sobic001G073600 Sobic002G396700--Sobic004G344800 Sobic002G396700--Sobic009G191400 Sobic002G396700--Sobic007G171500 Sobic002G396700--Sobic001G112400 Sobic001G115700 Sobic001G115700 Sobic002G396700--Sobic001G115700 Sobic009G089700 Sobic009G089700 Sobic002G396700--Sobic009G089700 Sobic002G396700--Sobic001G458800 Sobic002G396700--Sobic002G262200 Sobic001G465400 Sobic001G465400 Sobic002G396700--Sobic001G465400 Sobic010G032600--Sobic007G023400 Sobic010G032600--Sobic002G395000 Sobic010G032600--Sobic007G171500 Sobic010G032600--Sobic004G297700 Sobic001G457000 Sobic001G457000 Sobic010G032600--Sobic001G457000 Sobic010G032600--Sobic002G262200 Sobic010G032600--Sobic001G073600 Sobic010G032600--Sobic009G191400 Sobic010G032600--Sobic009G224400 Sobic004G054700 Sobic004G054700 Sobic009G132800--Sobic004G054700 Sobic009G216700 Sobic009G216700 Sobic009G132800--Sobic009G216700 Sobic001G008100 Sobic001G008100 Sobic009G132800--Sobic001G008100 Sobic007G012900 Sobic007G012900 Sobic009G132800--Sobic007G012900 Sobic006G219000 Sobic006G219000 Sobic009G132800--Sobic006G219000 Sobic004G141700 Sobic004G141700 Sobic009G132800--Sobic004G141700 Sobic004G256300 Sobic004G256300 Sobic009G132800--Sobic004G256300 Sobic001G538500 Sobic001G538500 Sobic009G132800--Sobic001G538500 Sobic002G401700 Sobic002G401700 Sobic009G132800--Sobic002G401700 Sobic001G073600--Sobic009G191400 Sobic001G073600--Sobic009G224400 Sobic001G073600--Sobic003G135600 Sobic001G073600--Sobic002G395000 Sobic001G073600--Sobic004G344800 Sobic001G073600--Sobic007G119600 Sobic001G073600--Sobic004G347600 Sobic001G073600--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic001G073600--Sobic004G155100 Sobic006G276700--Sobic004G297700 Sobic001G282500 Sobic001G282500 Sobic006G276700--Sobic001G282500 Sobic006G276700--Sobic010G032600 Sobic006G276700--Sobic001G073600 Sobic006G276700--Sobic002G395000 Sobic006G276700--Sobic003G135600 Sobic006G276700--Sobic004G202100 Sobic006G276700--Sobic007G023400 Sobic006G276700--Sobic007G171500 Sobic004G347600--Sobic009G191400 Sobic004G347600--Sobic001G073600 Sobic003G034900 Sobic003G034900 Sobic004G347600--Sobic003G034900 Sobic004G347600--Sobic001G458800 Sobic004G347600--Sobic001G465400 Sobic004G347600--Sobic001G112400 Sobic004G347600--Sobic001G115700 Sobic007G161200 Sobic007G161200 Sobic004G347600--Sobic007G161200 Sobic004G347600--Sobic001G443200
Octagon: transcription factors


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