Gene annotation
Transcriptome id Sobic.007G196500.1
Synonym Sb07g026500
Functional annotation SAM domain containing protein, putative, expressed
UniProt A0A1B6PIP8
Pfam PF00536
Panther DB PTHR23509 PTHR23509:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G07170 : Sterile alpha motif (SAM) domain-containing protein
RAP-DB (Rice) LOC_Os08g41480.1 : SAM domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a005234
Brachypodium KQJ99084
Barley HORVU7Hr1G053390.5 , HORVU7Hr1G053390.4 , HORVU7Hr1G053390.6 , HORVU7Hr1G053390.8 , HORVU7Hr1G053390.10
Wheat TraesCS7A02G257300 , TraesCS7B02G154200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G004200 PHD-finger domain containing protein, putative, expressed -
2 Sobic.001G415000 expressed protein -
3 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
4 Sobic.009G191600 tesmin/TSO1-like CXC domain containing protein, expressed -
5 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -
7 Sobic.004G059900 bZIP transcription factor domain containing protein, expressed -
8 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
9 Sobic.006G127000 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein
10 Sobic.003G021200 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
11 Sobic.002G428200 26S protease regulatory subunit 4, putative, expressed K03062: PSMC1, 26S proteasome regulatory subunit T2
12 Sobic.002G301300 SNF7 domain containing protein, putative, expressed K12193: VPS24, charged multivesicular body protein 3
13 Sobic.006G049700 SAM domain family protein, expressed -
14 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
15 Sobic.007G170900 histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
16 Sobic.003G190800 GA18326-PA, putative, expressed -
17 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
18 Sobic.001G214200 lysM domain containing protein, putative, expressed -
19 Sobic.003G023500 syntaxin, putative, expressed K08489: syntaxin 16
20 Sobic.006G189200 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I


Gene co-expression network
sample Sobic007G196500 Sobic007G196500 Sobic007G004200 Sobic007G004200 Sobic007G196500--Sobic007G004200 Sobic001G415000 Sobic001G415000 Sobic007G196500--Sobic001G415000 Sobic003G043400 Sobic003G043400 Sobic007G196500--Sobic003G043400 Sobic009G191600 Sobic009G191600 Sobic007G196500--Sobic009G191600 Sobic003G410400 Sobic003G410400 Sobic007G196500--Sobic003G410400 Sobic001G542900 Sobic001G542900 Sobic007G196500--Sobic001G542900 Sobic004G059900 Sobic004G059900 Sobic007G196500--Sobic004G059900 Sobic010G017000 Sobic010G017000 Sobic007G196500--Sobic010G017000 Sobic006G127000 Sobic006G127000 Sobic007G196500--Sobic006G127000 Sobic003G021200 Sobic003G021200 Sobic007G004200--Sobic003G021200 Sobic007G004200--Sobic001G542900 Sobic004G335000 Sobic004G335000 Sobic007G004200--Sobic004G335000 Sobic002G177700 Sobic002G177700 Sobic007G004200--Sobic002G177700 Sobic001G315500 Sobic001G315500 Sobic007G004200--Sobic001G315500 Sobic001G010700 Sobic001G010700 Sobic007G004200--Sobic001G010700 Sobic010G213200 Sobic010G213200 Sobic007G004200--Sobic010G213200 Sobic006G252200 Sobic006G252200 Sobic007G004200--Sobic006G252200 Sobic007G004200--Sobic007G196500 Sobic002G083266 Sobic002G083266 Sobic001G415000--Sobic002G083266 Sobic001G440700 Sobic001G440700 Sobic001G415000--Sobic001G440700 Sobic006G264300 Sobic006G264300 Sobic001G415000--Sobic006G264300 Sobic004G020000 Sobic004G020000 Sobic001G415000--Sobic004G020000 Sobic010G026700 Sobic010G026700 Sobic001G415000--Sobic010G026700 Sobic002G202300 Sobic002G202300 Sobic001G415000--Sobic002G202300 Sobic002G385900 Sobic002G385900 Sobic001G415000--Sobic002G385900 Sobic001G040800 Sobic001G040800 Sobic001G415000--Sobic001G040800 Sobic001G224400 Sobic001G224400 Sobic001G415000--Sobic001G224400 Sobic002G423800 Sobic002G423800 Sobic003G043400--Sobic002G423800 Sobic003G043400--Sobic001G010700 Sobic002G428200 Sobic002G428200 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic003G043400--Sobic004G335000 Sobic007G152400 Sobic007G152400 Sobic003G043400--Sobic007G152400 Sobic006G222400 Sobic006G222400 Sobic003G043400--Sobic006G222400 Sobic001G066700 Sobic001G066700 Sobic009G191600--Sobic001G066700 Sobic003G362400 Sobic003G362400 Sobic009G191600--Sobic003G362400 Sobic006G062800 Sobic006G062800 Sobic009G191600--Sobic006G062800 Sobic001G041100 Sobic001G041100 Sobic009G191600--Sobic001G041100 Sobic003G358300 Sobic003G358300 Sobic009G191600--Sobic003G358300 Sobic010G213400 Sobic010G213400 Sobic009G191600--Sobic010G213400 Sobic003G023500 Sobic003G023500 Sobic009G191600--Sobic003G023500 Sobic002G376500 Sobic002G376500 Sobic009G191600--Sobic002G376500 Sobic009G191600--Sobic001G224400 Sobic008G058700 Sobic008G058700 Sobic003G410400--Sobic008G058700 Sobic003G410400--Sobic003G043400 Sobic003G312400 Sobic003G312400 Sobic003G410400--Sobic003G312400 Sobic009G201800 Sobic009G201800 Sobic003G410400--Sobic009G201800 Sobic003G252900 Sobic003G252900 Sobic003G410400--Sobic003G252900 Sobic003G319000 Sobic003G319000 Sobic003G410400--Sobic003G319000 Sobic003G039200 Sobic003G039200 Sobic003G410400--Sobic003G039200 Sobic003G031200 Sobic003G031200 Sobic003G410400--Sobic003G031200 Sobic004G010700 Sobic004G010700 Sobic003G410400--Sobic004G010700 Sobic007G217400 Sobic007G217400 Sobic001G542900--Sobic007G217400 Sobic001G542900--Sobic002G423800 Sobic001G542900--Sobic004G335000 Sobic008G110500 Sobic008G110500 Sobic001G542900--Sobic008G110500 Sobic001G542900--Sobic003G043400 Sobic001G444300 Sobic001G444300 Sobic001G542900--Sobic001G444300 Sobic002G141700 Sobic002G141700 Sobic001G542900--Sobic002G141700 Sobic009G164700 Sobic009G164700 Sobic001G542900--Sobic009G164700 Sobic007G176200 Sobic007G176200 Sobic001G542900--Sobic007G176200 Sobic001G358300 Sobic001G358300 Sobic004G059900--Sobic001G358300 Sobic003G238000 Sobic003G238000 Sobic004G059900--Sobic003G238000 Sobic002G343300 Sobic002G343300 Sobic004G059900--Sobic002G343300 Sobic001G311100 Sobic001G311100 Sobic004G059900--Sobic001G311100 Sobic007G216500 Sobic007G216500 Sobic004G059900--Sobic007G216500 Sobic002G293300 Sobic002G293300 Sobic004G059900--Sobic002G293300 Sobic004G059900--Sobic001G415000 Sobic009G231200 Sobic009G231200 Sobic004G059900--Sobic009G231200 Sobic002G397600 Sobic002G397600 Sobic004G059900--Sobic002G397600 Sobic010G017000--Sobic006G222400 Sobic006G217700 Sobic006G217700 Sobic010G017000--Sobic006G217700 Sobic010G017000--Sobic003G021200 Sobic003G052400 Sobic003G052400 Sobic010G017000--Sobic003G052400 Sobic009G160200 Sobic009G160200 Sobic010G017000--Sobic009G160200 Sobic003G038600 Sobic003G038600 Sobic010G017000--Sobic003G038600 Sobic007G059900 Sobic007G059900 Sobic010G017000--Sobic007G059900 Sobic001G283500 Sobic001G283500 Sobic010G017000--Sobic001G283500 Sobic009G008600 Sobic009G008600 Sobic010G017000--Sobic009G008600 Sobic006G127000--Sobic003G021200 Sobic001G529000 Sobic001G529000 Sobic006G127000--Sobic001G529000 Sobic006G127000--Sobic003G362400 Sobic002G309400 Sobic002G309400 Sobic006G127000--Sobic002G309400 Sobic010G238700 Sobic010G238700 Sobic006G127000--Sobic010G238700 Sobic010G253800 Sobic010G253800 Sobic006G127000--Sobic010G253800 Sobic001G367000 Sobic001G367000 Sobic006G127000--Sobic001G367000 Sobic006G127000--Sobic001G041100 Sobic006G127000--Sobic010G017000
Octagon: transcription factors


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