Gene annotation
Transcriptome id Sobic.006G127000.1
Synonym Sb06g020710
Functional annotation Divergent PAP2 family domain containing protein, expressed
UniProt C5YAX7
Pfam PF02681
Panther DB PTHR31446 PTHR31446:SF8
NCBI CDD -
KEGG Orthology K09775; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67600 : Acid phosphatase/vanadium-dependent haloperoxidase-related protein
RAP-DB (Rice) LOC_Os04g40980.1 : Divergent PAP2 family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056336 , Zm00025a010946
Brachypodium KQJ83249 , KQJ83248 , KQJ83250 , KQJ83247
Barley HORVU2Hr1G084120.3 , HORVU2Hr1G084120.2 , HORVU2Hr1G084120.6 , HORVU2Hr1G084120.1 , HORVU2Hr1G084120.5 , HORVU2Hr1G084120.4
Wheat TraesCS2D02G344100 , TraesCS2A02G345400 , TraesCS2B02G363800 , TraesCS2B02G363800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G021200 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
2 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
3 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
4 Sobic.002G309400 -(PubMedID : 26976818)@NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed K00028: malate dehydrogenase (decarboxylating)
5 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
6 Sobic.010G253800 expressed protein -
7 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
8 Sobic.001G041100 RNA recognition motif containing protein, putative, expressed K12833: pre-mRNA branch site protein p14
9 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
10 Sobic.001G315500 ethylene-responsive element-binding protein, putative, expressed -
11 Sobic.004G054300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
12 Sobic.002G272600 TBC domain containing protein, expressed -
13 Sobic.003G295400 MAC/Perforin domain containing protein, putative, expressed -
14 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
15 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
17 Sobic.006G256500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
19 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
20 Sobic.006G141500 expressed protein -


Gene co-expression network
sample Sobic006G127000 Sobic006G127000 Sobic003G021200 Sobic003G021200 Sobic006G127000--Sobic003G021200 Sobic001G529000 Sobic001G529000 Sobic006G127000--Sobic001G529000 Sobic003G362400 Sobic003G362400 Sobic006G127000--Sobic003G362400 Sobic002G309400 Sobic002G309400 Sobic006G127000--Sobic002G309400 Sobic010G238700 Sobic010G238700 Sobic006G127000--Sobic010G238700 Sobic010G253800 Sobic010G253800 Sobic006G127000--Sobic010G253800 Sobic001G367000 Sobic001G367000 Sobic006G127000--Sobic001G367000 Sobic001G041100 Sobic001G041100 Sobic006G127000--Sobic001G041100 Sobic010G017000 Sobic010G017000 Sobic006G127000--Sobic010G017000 Sobic001G010700 Sobic001G010700 Sobic003G021200--Sobic001G010700 Sobic006G222400 Sobic006G222400 Sobic003G021200--Sobic006G222400 Sobic003G021200--Sobic010G017000 Sobic003G043400 Sobic003G043400 Sobic003G021200--Sobic003G043400 Sobic004G335000 Sobic004G335000 Sobic003G021200--Sobic004G335000 Sobic001G402300 Sobic001G402300 Sobic003G021200--Sobic001G402300 Sobic002G428200 Sobic002G428200 Sobic003G021200--Sobic002G428200 Sobic003G021200--Sobic010G238700 Sobic003G021200--Sobic006G127000 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G331900 Sobic001G331900 Sobic001G529000--Sobic001G331900 Sobic005G157200 Sobic005G157200 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic002G078400 Sobic002G078400 Sobic003G362400--Sobic002G078400 Sobic004G107600 Sobic004G107600 Sobic003G362400--Sobic004G107600 Sobic003G362400--Sobic001G529000 Sobic007G091000 Sobic007G091000 Sobic003G362400--Sobic007G091000 Sobic005G111100 Sobic005G111100 Sobic003G362400--Sobic005G111100 Sobic002G116200 Sobic002G116200 Sobic003G362400--Sobic002G116200 Sobic003G362400--Sobic001G331900 Sobic010G213400 Sobic010G213400 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic002G309400--Sobic001G529000 Sobic002G309400--Sobic001G331900 Sobic005G092800 Sobic005G092800 Sobic002G309400--Sobic005G092800 Sobic008G130400 Sobic008G130400 Sobic002G309400--Sobic008G130400 Sobic002G309400--Sobic003G124800 Sobic006G150600 Sobic006G150600 Sobic002G309400--Sobic006G150600 Sobic002G309400--Sobic003G362400 Sobic007G115100 Sobic007G115100 Sobic002G309400--Sobic007G115100 Sobic002G309400--Sobic004G107600 Sobic010G238700--Sobic006G222400 Sobic010G238700--Sobic001G529000 Sobic009G036900 Sobic009G036900 Sobic010G238700--Sobic009G036900 Sobic001G126200 Sobic001G126200 Sobic010G238700--Sobic001G126200 Sobic003G382900 Sobic003G382900 Sobic010G238700--Sobic003G382900 Sobic004G203100 Sobic004G203100 Sobic010G238700--Sobic004G203100 Sobic003G007500 Sobic003G007500 Sobic010G238700--Sobic003G007500 Sobic008G132800 Sobic008G132800 Sobic010G238700--Sobic008G132800 Sobic010G238700--Sobic001G010700 Sobic009G146100 Sobic009G146100 Sobic010G253800--Sobic009G146100 Sobic004G293700 Sobic004G293700 Sobic010G253800--Sobic004G293700 Sobic010G083700 Sobic010G083700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic002G352700 Sobic002G352700 Sobic010G253800--Sobic002G352700 Sobic001G007200 Sobic001G007200 Sobic010G253800--Sobic001G007200 Sobic006G263900 Sobic006G263900 Sobic010G253800--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic010G253800--Sobic009G171700 Sobic001G054200 Sobic001G054200 Sobic010G253800--Sobic001G054200 Sobic001G367000--Sobic001G529000 Sobic004G224800 Sobic004G224800 Sobic001G367000--Sobic004G224800 Sobic001G367000--Sobic006G222400 Sobic002G090700 Sobic002G090700 Sobic001G367000--Sobic002G090700 Sobic001G367000--Sobic003G362400 Sobic001G367000--Sobic001G054200 Sobic001G367000--Sobic001G126200 Sobic001G367000--Sobic003G124800 Sobic010G065400 Sobic010G065400 Sobic001G367000--Sobic010G065400 Sobic004G265700 Sobic004G265700 Sobic001G041100--Sobic004G265700 Sobic006G141500 Sobic006G141500 Sobic001G041100--Sobic006G141500 Sobic010G163600 Sobic010G163600 Sobic001G041100--Sobic010G163600 Sobic001G041100--Sobic003G362400 Sobic001G066700 Sobic001G066700 Sobic001G041100--Sobic001G066700 Sobic001G041100--Sobic010G213400 Sobic006G010600 Sobic006G010600 Sobic001G041100--Sobic006G010600 Sobic009G191600 Sobic009G191600 Sobic001G041100--Sobic009G191600 Sobic001G041100--Sobic007G203700 Sobic010G017000--Sobic006G222400 Sobic006G217700 Sobic006G217700 Sobic010G017000--Sobic006G217700 Sobic010G017000--Sobic003G021200 Sobic003G052400 Sobic003G052400 Sobic010G017000--Sobic003G052400 Sobic009G160200 Sobic009G160200 Sobic010G017000--Sobic009G160200 Sobic003G038600 Sobic003G038600 Sobic010G017000--Sobic003G038600 Sobic007G059900 Sobic007G059900 Sobic010G017000--Sobic007G059900 Sobic001G283500 Sobic001G283500 Sobic010G017000--Sobic001G283500 Sobic009G008600 Sobic009G008600 Sobic010G017000--Sobic009G008600
Octagon: transcription factors


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