Gene annotation
Transcriptome id Sobic.002G046300.1
Synonym Sb02g003920
Functional annotation expressed protein
UniProt C5XAC3
Pfam PF12874
Panther DB PTHR36332
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60640 : -
RAP-DB (Rice) LOC_Os01g32130.1 : expressed protein
MaizeGDB (Corn) Zm00025a045106
Brachypodium KQJ86993 , KQJ86990
Barley -
Wheat TraesCS1A02G198200 , TraesCS1A02G198200 , TraesCS1A02G198200 , TraesCS1B02G212900 , TraesCS1B02G212900
Populus -


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cDNA sequences
Sobic.002G046300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
2 Sobic.004G200400 protein kinase domain containing protein, expressed -
3 Sobic.002G278600 peptidyl-prolyl cis-trans isomerase, putative, expressed -
4 Sobic.010G009250 - -
5 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
6 Sobic.010G241600 RNASEH2A - Putative ribonuclease H2 large subunit, expressed K10743: ribonuclease H2 subunit A
7 Sobic.003G089200 expressed protein -
8 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
9 Sobic.001G466600 expressed protein -
10 Sobic.007G018700 kinesin motor domain containing protein, putative, expressed -
11 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
12 Sobic.009G042100 MA3 domain containing protein, expressed K17583: nucleolar MIF4G domain-containing protein 1
13 Sobic.003G412200 inducer of CBF expression 2, putative, expressed -
14 Sobic.002G104300 FAS1, putative, expressed K10750: chromatin assembly factor 1 subunit A
15 Sobic.002G349000 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
16 Sobic.007G068200 starch synthase III, putative, expressed -
17 Sobic.003G324300 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
18 Sobic.002G312800 WD domain, G-beta repeat domain containing protein, expressed K14841: NSA1, ribosome biogenesis protein NSA1
19 Sobic.004G272900 expressed protein -
20 Sobic.008G011400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2


Gene co-expression network
sample Sobic002G046300 Sobic002G046300 Sobic005G050600 Sobic005G050600 Sobic002G046300--Sobic005G050600 Sobic004G200400 Sobic004G200400 Sobic002G046300--Sobic004G200400 Sobic002G278600 Sobic002G278600 Sobic002G046300--Sobic002G278600 Sobic010G009250 Sobic010G009250 Sobic002G046300--Sobic010G009250 Sobic007G150700 Sobic007G150700 Sobic002G046300--Sobic007G150700 Sobic010G241600 Sobic010G241600 Sobic002G046300--Sobic010G241600 Sobic003G089200 Sobic003G089200 Sobic002G046300--Sobic003G089200 Sobic005G032400 Sobic005G032400 Sobic002G046300--Sobic005G032400 Sobic001G466600 Sobic001G466600 Sobic002G046300--Sobic001G466600 Sobic003G004500 Sobic003G004500 Sobic005G050600--Sobic003G004500 Sobic001G033400 Sobic001G033400 Sobic005G050600--Sobic001G033400 Sobic003G412200 Sobic003G412200 Sobic005G050600--Sobic003G412200 Sobic001G041400 Sobic001G041400 Sobic005G050600--Sobic001G041400 Sobic007G018700 Sobic007G018700 Sobic005G050600--Sobic007G018700 Sobic005G050600--Sobic005G032400 Sobic001G042800 Sobic001G042800 Sobic005G050600--Sobic001G042800 Sobic010G250900 Sobic010G250900 Sobic005G050600--Sobic010G250900 Sobic008G160500 Sobic008G160500 Sobic005G050600--Sobic008G160500 Sobic009G207500 Sobic009G207500 Sobic004G200400--Sobic009G207500 Sobic007G204600 Sobic007G204600 Sobic004G200400--Sobic007G204600 Sobic005G052100 Sobic005G052100 Sobic004G200400--Sobic005G052100 Sobic005G075000 Sobic005G075000 Sobic004G200400--Sobic005G075000 Sobic005G003100 Sobic005G003100 Sobic004G200400--Sobic005G003100 Sobic002G069800 Sobic002G069800 Sobic004G200400--Sobic002G069800 Sobic001G330600 Sobic001G330600 Sobic004G200400--Sobic001G330600 Sobic009G013200 Sobic009G013200 Sobic004G200400--Sobic009G013200 Sobic003G213100 Sobic003G213100 Sobic004G200400--Sobic003G213100 Sobic004G350200 Sobic004G350200 Sobic002G278600--Sobic004G350200 Sobic010G059700 Sobic010G059700 Sobic002G278600--Sobic010G059700 Sobic002G329700 Sobic002G329700 Sobic002G278600--Sobic002G329700 Sobic002G306600 Sobic002G306600 Sobic002G278600--Sobic002G306600 Sobic006G120200 Sobic006G120200 Sobic002G278600--Sobic006G120200 Sobic003G396800 Sobic003G396800 Sobic002G278600--Sobic003G396800 Sobic008G050700 Sobic008G050700 Sobic002G278600--Sobic008G050700 Sobic010G038900 Sobic010G038900 Sobic002G278600--Sobic010G038900 Sobic009G063800 Sobic009G063800 Sobic002G278600--Sobic009G063800 Sobic010G009250--Sobic004G200400 Sobic009G122375 Sobic009G122375 Sobic010G009250--Sobic009G122375 Sobic004G187200 Sobic004G187200 Sobic010G009250--Sobic004G187200 Sobic010G009250--Sobic003G412200 Sobic010G009250--Sobic005G052100 Sobic002G104300 Sobic002G104300 Sobic010G009250--Sobic002G104300 Sobic010G009250--Sobic001G330600 Sobic004G090200 Sobic004G090200 Sobic010G009250--Sobic004G090200 Sobic001G083900 Sobic001G083900 Sobic010G009250--Sobic001G083900 Sobic001G442200 Sobic001G442200 Sobic007G150700--Sobic001G442200 Sobic004G196800 Sobic004G196800 Sobic007G150700--Sobic004G196800 Sobic005G171800 Sobic005G171800 Sobic007G150700--Sobic005G171800 Sobic004G212350 Sobic004G212350 Sobic007G150700--Sobic004G212350 Sobic005G032500 Sobic005G032500 Sobic007G150700--Sobic005G032500 Sobic010G060100 Sobic010G060100 Sobic007G150700--Sobic010G060100 Sobic002G100000 Sobic002G100000 Sobic007G150700--Sobic002G100000 Sobic001G425900 Sobic001G425900 Sobic007G150700--Sobic001G425900 Sobic010G084800 Sobic010G084800 Sobic007G150700--Sobic010G084800 Sobic010G241600--Sobic001G466600 Sobic010G237800 Sobic010G237800 Sobic010G241600--Sobic010G237800 Sobic003G282700 Sobic003G282700 Sobic010G241600--Sobic003G282700 Sobic001G141700 Sobic001G141700 Sobic010G241600--Sobic001G141700 Sobic006G106200 Sobic006G106200 Sobic010G241600--Sobic006G106200 Sobic010G241600--Sobic004G350200 Sobic002G312800 Sobic002G312800 Sobic010G241600--Sobic002G312800 Sobic003G349000 Sobic003G349000 Sobic010G241600--Sobic003G349000 Sobic010G021900 Sobic010G021900 Sobic010G241600--Sobic010G021900 Sobic003G089200--Sobic005G050600 Sobic003G089200--Sobic010G009250 Sobic003G089200--Sobic007G018700 Sobic003G089200--Sobic002G046300 Sobic003G089200--Sobic004G200400 Sobic003G089200--Sobic009G122375 Sobic001G299800 Sobic001G299800 Sobic003G089200--Sobic001G299800 Sobic009G042100 Sobic009G042100 Sobic003G089200--Sobic009G042100 Sobic003G089200--Sobic001G466600 Sobic005G032400--Sobic003G004500 Sobic010G262900 Sobic010G262900 Sobic005G032400--Sobic010G262900 Sobic003G415100 Sobic003G415100 Sobic005G032400--Sobic003G415100 Sobic001G053700 Sobic001G053700 Sobic005G032400--Sobic001G053700 Sobic002G403200 Sobic002G403200 Sobic005G032400--Sobic002G403200 Sobic005G032400--Sobic005G050600 Sobic009G156200 Sobic009G156200 Sobic005G032400--Sobic009G156200 Sobic010G180200 Sobic010G180200 Sobic005G032400--Sobic010G180200 Sobic008G045800 Sobic008G045800 Sobic005G032400--Sobic008G045800 Sobic001G466600--Sobic002G312800 Sobic001G466600--Sobic010G241600 Sobic006G095400 Sobic006G095400 Sobic001G466600--Sobic006G095400 Sobic001G466600--Sobic001G299800 Sobic001G466600--Sobic002G046300 Sobic001G466600--Sobic002G329700 Sobic001G152360 Sobic001G152360 Sobic001G466600--Sobic001G152360 Sobic001G466600--Sobic003G089200 Sobic009G228900 Sobic009G228900 Sobic001G466600--Sobic009G228900
Octagon: transcription factors


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