Gene annotation
Transcriptome id Sobic.001G466600.1
Synonym Sb01g043780
Functional annotation expressed protein
UniProt C5WTU0
Pfam -
Panther DB PTHR36765 PTHR36765:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G49890 : -
RAP-DB (Rice) LOC_Os03g10410.1 : expressed protein
MaizeGDB (Corn) Zm00025a053146
Brachypodium KQK23069
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G312800 WD domain, G-beta repeat domain containing protein, expressed K14841: NSA1, ribosome biogenesis protein NSA1
2 Sobic.010G241600 RNASEH2A - Putative ribonuclease H2 large subunit, expressed K10743: ribonuclease H2 subunit A
3 Sobic.006G095400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K14826: FK506-binding nuclear protein
4 Sobic.001G299800 inducer of CBF expression 2, putative, expressed -
5 Sobic.002G046300 expressed protein -
6 Sobic.002G329700 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
7 Sobic.001G152360 - -
8 Sobic.003G089200 expressed protein -
9 Sobic.009G228900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exosome complex exonuclease, putative, expressed K11600: RRP41, EXOSC4, exosome complex component RRP41
10 Sobic.009G042100 MA3 domain containing protein, expressed K17583: nucleolar MIF4G domain-containing protein 1
11 Sobic.003G349000 ruvB-like, putative, expressed K04499: RUVBL1, RVB1, RuvB-like protein 1 (pontin 52)
12 Sobic.001G206500 nucleolar complex protein 2, putative, expressed K14833: nucleolar complex protein 2
13 Sobic.001G141700 acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed K18647: acidic leucine-rich nuclear phosphoprotein 32 family member B
14 Sobic.002G300500 DNA-directed RNA polymerase III subunit RPC8, putative, expressed K03022: RPC8, DNA-directed RNA polymerase III subunit RPC8
15 Sobic.002G154400 MIM, putative, expressed -
16 Sobic.002G278600 peptidyl-prolyl cis-trans isomerase, putative, expressed -
17 Sobic.004G272400 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B
18 Sobic.006G120200 Rf1, mitochondrial precursor, putative, expressed -
19 Sobic.001G370500 expressed protein K14851: RRP17, ribosomal RNA-processing protein 17
20 Sobic.006G143200 - K14805: DDX24, ATP-dependent RNA helicase DDX24/MAK5


Gene co-expression network
sample Sobic001G466600 Sobic001G466600 Sobic002G312800 Sobic002G312800 Sobic001G466600--Sobic002G312800 Sobic010G241600 Sobic010G241600 Sobic001G466600--Sobic010G241600 Sobic006G095400 Sobic006G095400 Sobic001G466600--Sobic006G095400 Sobic001G299800 Sobic001G299800 Sobic001G466600--Sobic001G299800 Sobic002G046300 Sobic002G046300 Sobic001G466600--Sobic002G046300 Sobic002G329700 Sobic002G329700 Sobic001G466600--Sobic002G329700 Sobic001G152360 Sobic001G152360 Sobic001G466600--Sobic001G152360 Sobic003G089200 Sobic003G089200 Sobic001G466600--Sobic003G089200 Sobic009G228900 Sobic009G228900 Sobic001G466600--Sobic009G228900 Sobic002G312800--Sobic001G466600 Sobic002G312800--Sobic006G095400 Sobic003G349000 Sobic003G349000 Sobic002G312800--Sobic003G349000 Sobic002G312800--Sobic001G299800 Sobic002G154400 Sobic002G154400 Sobic002G312800--Sobic002G154400 Sobic002G312800--Sobic010G241600 Sobic009G042100 Sobic009G042100 Sobic002G312800--Sobic009G042100 Sobic003G282700 Sobic003G282700 Sobic002G312800--Sobic003G282700 Sobic007G053700 Sobic007G053700 Sobic002G312800--Sobic007G053700 Sobic010G241600--Sobic001G466600 Sobic010G237800 Sobic010G237800 Sobic010G241600--Sobic010G237800 Sobic010G241600--Sobic003G282700 Sobic001G141700 Sobic001G141700 Sobic010G241600--Sobic001G141700 Sobic006G106200 Sobic006G106200 Sobic010G241600--Sobic006G106200 Sobic004G350200 Sobic004G350200 Sobic010G241600--Sobic004G350200 Sobic010G241600--Sobic002G312800 Sobic010G241600--Sobic003G349000 Sobic010G021900 Sobic010G021900 Sobic010G241600--Sobic010G021900 Sobic001G173800 Sobic001G173800 Sobic006G095400--Sobic001G173800 Sobic009G228500 Sobic009G228500 Sobic006G095400--Sobic009G228500 Sobic006G095400--Sobic002G312800 Sobic002G300500 Sobic002G300500 Sobic006G095400--Sobic002G300500 Sobic006G143200 Sobic006G143200 Sobic006G095400--Sobic006G143200 Sobic009G235200 Sobic009G235200 Sobic006G095400--Sobic009G235200 Sobic001G206500 Sobic001G206500 Sobic006G095400--Sobic001G206500 Sobic008G163500 Sobic008G163500 Sobic006G095400--Sobic008G163500 Sobic006G095400--Sobic001G466600 Sobic001G299800--Sobic002G312800 Sobic001G299800--Sobic001G466600 Sobic001G299800--Sobic003G089200 Sobic004G020150 Sobic004G020150 Sobic001G299800--Sobic004G020150 Sobic001G299800--Sobic003G349000 Sobic009G088575 Sobic009G088575 Sobic001G299800--Sobic009G088575 Sobic010G087000 Sobic010G087000 Sobic001G299800--Sobic010G087000 Sobic009G239400 Sobic009G239400 Sobic001G299800--Sobic009G239400 Sobic008G140500 Sobic008G140500 Sobic001G299800--Sobic008G140500 Sobic005G050600 Sobic005G050600 Sobic002G046300--Sobic005G050600 Sobic004G200400 Sobic004G200400 Sobic002G046300--Sobic004G200400 Sobic002G278600 Sobic002G278600 Sobic002G046300--Sobic002G278600 Sobic010G009250 Sobic010G009250 Sobic002G046300--Sobic010G009250 Sobic007G150700 Sobic007G150700 Sobic002G046300--Sobic007G150700 Sobic002G046300--Sobic010G241600 Sobic002G046300--Sobic003G089200 Sobic005G032400 Sobic005G032400 Sobic002G046300--Sobic005G032400 Sobic002G046300--Sobic001G466600 Sobic002G088100 Sobic002G088100 Sobic002G329700--Sobic002G088100 Sobic002G329700--Sobic002G278600 Sobic003G396800 Sobic003G396800 Sobic002G329700--Sobic003G396800 Sobic003G295700 Sobic003G295700 Sobic002G329700--Sobic003G295700 Sobic004G010700 Sobic004G010700 Sobic002G329700--Sobic004G010700 Sobic002G329700--Sobic010G241600 Sobic004G288100 Sobic004G288100 Sobic002G329700--Sobic004G288100 Sobic006G120200 Sobic006G120200 Sobic002G329700--Sobic006G120200 Sobic006G129000 Sobic006G129000 Sobic002G329700--Sobic006G129000 Sobic001G152360--Sobic001G466600 Sobic001G033600 Sobic001G033600 Sobic001G152360--Sobic001G033600 Sobic010G246300 Sobic010G246300 Sobic001G152360--Sobic010G246300 Sobic009G250600 Sobic009G250600 Sobic001G152360--Sobic009G250600 Sobic010G206501 Sobic010G206501 Sobic001G152360--Sobic010G206501 Sobic001G152360--Sobic010G241600 Sobic003G133300 Sobic003G133300 Sobic001G152360--Sobic003G133300 Sobic001G252600 Sobic001G252600 Sobic001G152360--Sobic001G252600 Sobic001G180700 Sobic001G180700 Sobic001G152360--Sobic001G180700 Sobic003G089200--Sobic005G050600 Sobic003G089200--Sobic010G009250 Sobic007G018700 Sobic007G018700 Sobic003G089200--Sobic007G018700 Sobic003G089200--Sobic002G046300 Sobic003G089200--Sobic004G200400 Sobic009G122375 Sobic009G122375 Sobic003G089200--Sobic009G122375 Sobic003G089200--Sobic001G299800 Sobic003G089200--Sobic009G042100 Sobic003G089200--Sobic001G466600 Sobic001G097400 Sobic001G097400 Sobic009G228900--Sobic001G097400 Sobic001G235700 Sobic001G235700 Sobic009G228900--Sobic001G235700 Sobic003G235700 Sobic003G235700 Sobic009G228900--Sobic003G235700 Sobic003G098200 Sobic003G098200 Sobic009G228900--Sobic003G098200 Sobic009G176300 Sobic009G176300 Sobic009G228900--Sobic009G176300 Sobic002G110500 Sobic002G110500 Sobic009G228900--Sobic002G110500 Sobic009G228900--Sobic002G300500 Sobic006G251600 Sobic006G251600 Sobic009G228900--Sobic006G251600 Sobic005G088900 Sobic005G088900 Sobic009G228900--Sobic005G088900
Octagon: transcription factors


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