Gene annotation
Transcriptome id Sobic.001G206500.1
Synonym Sb01g018260
Functional annotation nucleolar complex protein 2, putative, expressed
UniProt A0A1B6QK03
Pfam PF03715
Panther DB PTHR12687 PTHR12687:SF4
NCBI CDD KOG2256; Predicted protein involved in nuclear export of pre-ribosomes
KEGG Orthology K14833; nucleolar complex protein 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G18220 : Noc2p family
RAP-DB (Rice) LOC_Os10g35280.1 : nucleolar complex protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a017506
Brachypodium KQJ97287 , PNT67639
Barley HORVU1Hr1G043640.1 , HORVU1Hr1G043640.2 , HORVU1Hr1G043640.3 , HORVU1Hr1G043640.4 , HORVU1Hr1G043640.6 , HORVU1Hr1G043640.7
Wheat TraesCS1B02G180700 , TraesCS1A02G163900 , TraesCS1D02G160800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G042100 MA3 domain containing protein, expressed K17583: nucleolar MIF4G domain-containing protein 1
2 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase
3 Sobic.003G004300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
4 Sobic.001G098400 expressed protein K16278: E3 ubiquitin-protein ligase HOS1
5 Sobic.003G222000 metallo-beta-lactamase, putative, expressed K13148: CPSF3L, integrator complex subunit 11
6 Sobic.010G081700 PPR repeat domain containing protein, putative, expressed -
7 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -
8 Sobic.002G428100 tim44-like domain containing protein, expressed K17804: mitochondrial import inner membrane translocase subunit TIM44
9 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.002G150700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
11 Sobic.004G126000 pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed K18914: adrenodoxin-NADP+ reductase
12 Sobic.001G007800 WD domain, G-beta repeat domain containing protein, expressed K11806: DCAF13, DDB1- and CUL4-associated factor 13
13 Sobic.002G279800 M phase phosphoprotein 10, putative, expressed K14559: U3 small nucleolar RNA-associated protein MPP10
14 Sobic.007G089800 SET domain containing protein, expressed K19199: protein-histidine N-methyltransferase
15 Sobic.004G307500 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
16 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
17 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
18 Sobic.006G135900 cell division control protein 48 homolog B, putative, expressed -
19 Sobic.004G322300 nucleotide binding protein, putative, expressed K03351: anaphase-promoting complex subunit 4
20 Sobic.006G143200 - K14805: DDX24, ATP-dependent RNA helicase DDX24/MAK5


Gene co-expression network
sample Sobic001G206500 Sobic001G206500 Sobic009G042100 Sobic009G042100 Sobic001G206500--Sobic009G042100 Sobic001G455800 Sobic001G455800 Sobic001G206500--Sobic001G455800 Sobic003G004300 Sobic003G004300 Sobic001G206500--Sobic003G004300 Sobic001G098400 Sobic001G098400 Sobic001G206500--Sobic001G098400 Sobic003G222000 Sobic003G222000 Sobic001G206500--Sobic003G222000 Sobic010G081700 Sobic010G081700 Sobic001G206500--Sobic010G081700 Sobic004G031300 Sobic004G031300 Sobic001G206500--Sobic004G031300 Sobic002G428100 Sobic002G428100 Sobic001G206500--Sobic002G428100 Sobic001G004100 Sobic001G004100 Sobic001G206500--Sobic001G004100 Sobic009G042100--Sobic001G206500 Sobic002G154400 Sobic002G154400 Sobic009G042100--Sobic002G154400 Sobic003G206600 Sobic003G206600 Sobic009G042100--Sobic003G206600 Sobic009G069200 Sobic009G069200 Sobic009G042100--Sobic009G069200 Sobic008G017900 Sobic008G017900 Sobic009G042100--Sobic008G017900 Sobic009G043400 Sobic009G043400 Sobic009G042100--Sobic009G043400 Sobic003G349000 Sobic003G349000 Sobic009G042100--Sobic003G349000 Sobic002G312800 Sobic002G312800 Sobic009G042100--Sobic002G312800 Sobic010G240800 Sobic010G240800 Sobic009G042100--Sobic010G240800 Sobic009G016400 Sobic009G016400 Sobic001G455800--Sobic009G016400 Sobic002G150700 Sobic002G150700 Sobic001G455800--Sobic002G150700 Sobic006G196300 Sobic006G196300 Sobic001G455800--Sobic006G196300 Sobic004G340400 Sobic004G340400 Sobic001G455800--Sobic004G340400 Sobic002G371700 Sobic002G371700 Sobic001G455800--Sobic002G371700 Sobic001G447300 Sobic001G447300 Sobic001G455800--Sobic001G447300 Sobic002G142900 Sobic002G142900 Sobic001G455800--Sobic002G142900 Sobic008G160000 Sobic008G160000 Sobic001G455800--Sobic008G160000 Sobic001G145400 Sobic001G145400 Sobic001G455800--Sobic001G145400 Sobic001G509500 Sobic001G509500 Sobic003G004300--Sobic001G509500 Sobic003G004300--Sobic001G455800 Sobic003G004300--Sobic001G206500 Sobic003G004300--Sobic001G447300 Sobic009G020500 Sobic009G020500 Sobic003G004300--Sobic009G020500 Sobic010G114900 Sobic010G114900 Sobic003G004300--Sobic010G114900 Sobic001G376900 Sobic001G376900 Sobic003G004300--Sobic001G376900 Sobic006G135900 Sobic006G135900 Sobic003G004300--Sobic006G135900 Sobic007G126500 Sobic007G126500 Sobic003G004300--Sobic007G126500 Sobic003G308500 Sobic003G308500 Sobic001G098400--Sobic003G308500 Sobic006G125500 Sobic006G125500 Sobic001G098400--Sobic006G125500 Sobic002G252100 Sobic002G252100 Sobic001G098400--Sobic002G252100 Sobic002G371600 Sobic002G371600 Sobic001G098400--Sobic002G371600 Sobic001G346900 Sobic001G346900 Sobic001G098400--Sobic001G346900 Sobic003G309050 Sobic003G309050 Sobic001G098400--Sobic003G309050 Sobic001G098400--Sobic001G004100 Sobic004G006600 Sobic004G006600 Sobic001G098400--Sobic004G006600 Sobic003G433300 Sobic003G433300 Sobic001G098400--Sobic003G433300 Sobic002G398700 Sobic002G398700 Sobic003G222000--Sobic002G398700 Sobic003G222000--Sobic010G081700 Sobic002G395700 Sobic002G395700 Sobic003G222000--Sobic002G395700 Sobic002G369701 Sobic002G369701 Sobic003G222000--Sobic002G369701 Sobic003G222000--Sobic001G206500 Sobic001G015400 Sobic001G015400 Sobic003G222000--Sobic001G015400 Sobic002G279800 Sobic002G279800 Sobic003G222000--Sobic002G279800 Sobic010G091400 Sobic010G091400 Sobic003G222000--Sobic010G091400 Sobic006G106300 Sobic006G106300 Sobic003G222000--Sobic006G106300 Sobic001G460500 Sobic001G460500 Sobic010G081700--Sobic001G460500 Sobic004G348600 Sobic004G348600 Sobic010G081700--Sobic004G348600 Sobic004G208500 Sobic004G208500 Sobic010G081700--Sobic004G208500 Sobic004G322300 Sobic004G322300 Sobic010G081700--Sobic004G322300 Sobic010G081700--Sobic002G398700 Sobic010G081700--Sobic006G106300 Sobic002G408900 Sobic002G408900 Sobic010G081700--Sobic002G408900 Sobic004G356200 Sobic004G356200 Sobic010G081700--Sobic004G356200 Sobic010G081700--Sobic002G150700 Sobic004G031300--Sobic001G004100 Sobic006G245900 Sobic006G245900 Sobic004G031300--Sobic006G245900 Sobic006G191200 Sobic006G191200 Sobic004G031300--Sobic006G191200 Sobic005G000300 Sobic005G000300 Sobic004G031300--Sobic005G000300 Sobic004G031300--Sobic006G125500 Sobic002G296400 Sobic002G296400 Sobic004G031300--Sobic002G296400 Sobic006G002800 Sobic006G002800 Sobic004G031300--Sobic006G002800 Sobic004G031300--Sobic003G308500 Sobic002G381900 Sobic002G381900 Sobic004G031300--Sobic002G381900 Sobic001G099900 Sobic001G099900 Sobic002G428100--Sobic001G099900 Sobic001G211900 Sobic001G211900 Sobic002G428100--Sobic001G211900 Sobic008G018500 Sobic008G018500 Sobic002G428100--Sobic008G018500 Sobic009G077600 Sobic009G077600 Sobic002G428100--Sobic009G077600 Sobic004G059400 Sobic004G059400 Sobic002G428100--Sobic004G059400 Sobic002G131400 Sobic002G131400 Sobic002G428100--Sobic002G131400 Sobic003G025600 Sobic003G025600 Sobic002G428100--Sobic003G025600 Sobic003G146600 Sobic003G146600 Sobic002G428100--Sobic003G146600 Sobic008G055900 Sobic008G055900 Sobic002G428100--Sobic008G055900 Sobic001G004100--Sobic004G031300 Sobic007G187600 Sobic007G187600 Sobic001G004100--Sobic007G187600 Sobic001G013300 Sobic001G013300 Sobic001G004100--Sobic001G013300 Sobic009G113100 Sobic009G113100 Sobic001G004100--Sobic009G113100 Sobic009G255600 Sobic009G255600 Sobic001G004100--Sobic009G255600 Sobic001G408600 Sobic001G408600 Sobic001G004100--Sobic001G408600 Sobic001G373000 Sobic001G373000 Sobic001G004100--Sobic001G373000 Sobic002G142700 Sobic002G142700 Sobic001G004100--Sobic002G142700 Sobic001G034500 Sobic001G034500 Sobic001G004100--Sobic001G034500
Octagon: transcription factors


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