Gene annotation
Transcriptome id Sobic.002G279800.3,Sobic.002G279800.4,Sobic.002G279800.2
Synonym Sb02g031250
Functional annotation M phase phosphoprotein 10, putative, expressed
UniProt A0A1W0W660 , A0A1W0W689 , A0A1W0W620
Pfam PF04006
Panther DB PTHR17039
NCBI CDD KOG2600; U3 small nucleolar ribonucleoprotein (snoRNP) subunit - Mpp10p
KEGG Orthology K14559; U3 small nucleolar RNA-associated protein MPP10
Gene Ontology GO:0006364; rRNA processing GO:0005732small nucleolar ribonucleoprotein complex GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G66540 : -
RAP-DB (Rice) LOC_Os12g04010.1 : M-phase phosphoprotein 10, putative, expressed
MaizeGDB (Corn) Zm00025a044306
Brachypodium PNT65506 , KQJ92414
Barley HORVU5Hr1G044440.1
Wheat TraesCS5B02G136600 , TraesCS5D02G154000 , TraesCS5A02G138100 , TraesCS5B02G137800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G156500 WD domain, G-beta repeat domain containing protein, expressed K14824: ERB1, ribosome biogenesis protein ERB1
2 Sobic.004G126000 pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed K18914: adrenodoxin-NADP+ reductase
3 Sobic.001G501400 WD domain, G-beta repeat domain containing protein, expressed K14556: DIP2, UTP12, U3 small nucleolar RNA-associated protein 12
4 Sobic.001G503900 MT-A70 domain containing protein, expressed -
5 Sobic.003G222000 metallo-beta-lactamase, putative, expressed K13148: CPSF3L, integrator complex subunit 11
6 Sobic.006G013100 expressed protein K13205: AAR2, A1 cistron-splicing factor AAR2
7 Sobic.009G217200 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K02999: RPA1, DNA-directed RNA polymerase I subunit RPA1
8 Sobic.001G206500 nucleolar complex protein 2, putative, expressed K14833: nucleolar complex protein 2
9 Sobic.002G317100 PPR repeat containing protein, expressed -
10 Sobic.001G173800 nop14-like family protein, expressed K14766: NOP14, nucleolar protein 14
11 Sobic.001G358600 LTV1, putative, expressed K14798: protein LTV1
12 Sobic.010G102600 pentatricopeptide, putative, expressed -
13 Sobic.003G275600 ribosomal RNA assembly protein mis3, putative, expressed K06961: ribosomal RNA assembly protein
14 Sobic.001G453400 CCAAT/enhancer-binding protein, putative, expressed K14832: MAK21, NOC1, ribosome biogenesis protein MAK21
15 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
16 Sobic.008G185800 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
17 Sobic.003G260400 ATP dependent DNA ligase family protein, putative, expressed K10747: DNA ligase 1
18 Sobic.010G003400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
19 Sobic.004G320500 expressed protein K14794: ribosomal RNA-processing protein 12
20 Sobic.001G376400 Brix domain containing protein, putative, expressed K14859: ribosome biogenesis protein SSF1/2


Gene co-expression network
sample Sobic002G279800 Sobic002G279800 Sobic003G156500 Sobic003G156500 Sobic002G279800--Sobic003G156500 Sobic004G126000 Sobic004G126000 Sobic002G279800--Sobic004G126000 Sobic001G501400 Sobic001G501400 Sobic002G279800--Sobic001G501400 Sobic001G503900 Sobic001G503900 Sobic002G279800--Sobic001G503900 Sobic003G222000 Sobic003G222000 Sobic002G279800--Sobic003G222000 Sobic006G013100 Sobic006G013100 Sobic002G279800--Sobic006G013100 Sobic009G217200 Sobic009G217200 Sobic002G279800--Sobic009G217200 Sobic001G206500 Sobic001G206500 Sobic002G279800--Sobic001G206500 Sobic002G317100 Sobic002G317100 Sobic002G279800--Sobic002G317100 Sobic001G453400 Sobic001G453400 Sobic003G156500--Sobic001G453400 Sobic003G156500--Sobic009G217200 Sobic003G156500--Sobic001G501400 Sobic010G003400 Sobic010G003400 Sobic003G156500--Sobic010G003400 Sobic003G260400 Sobic003G260400 Sobic003G156500--Sobic003G260400 Sobic003G156500--Sobic001G503900 Sobic001G358600 Sobic001G358600 Sobic003G156500--Sobic001G358600 Sobic010G102600 Sobic010G102600 Sobic003G156500--Sobic010G102600 Sobic004G320500 Sobic004G320500 Sobic003G156500--Sobic004G320500 Sobic004G340400 Sobic004G340400 Sobic004G126000--Sobic004G340400 Sobic010G007100 Sobic010G007100 Sobic004G126000--Sobic010G007100 Sobic001G145400 Sobic001G145400 Sobic004G126000--Sobic001G145400 Sobic001G355200 Sobic001G355200 Sobic004G126000--Sobic001G355200 Sobic008G185800 Sobic008G185800 Sobic004G126000--Sobic008G185800 Sobic004G126000--Sobic002G279800 Sobic010G059500 Sobic010G059500 Sobic004G126000--Sobic010G059500 Sobic003G042400 Sobic003G042400 Sobic004G126000--Sobic003G042400 Sobic004G126000--Sobic004G320500 Sobic001G501400--Sobic001G358600 Sobic006G128400 Sobic006G128400 Sobic001G501400--Sobic006G128400 Sobic001G501400--Sobic003G156500 Sobic001G173800 Sobic001G173800 Sobic001G501400--Sobic001G173800 Sobic006G125900 Sobic006G125900 Sobic001G501400--Sobic006G125900 Sobic008G049100 Sobic008G049100 Sobic001G501400--Sobic008G049100 Sobic001G501400--Sobic010G003400 Sobic002G378100 Sobic002G378100 Sobic001G501400--Sobic002G378100 Sobic006G193300 Sobic006G193300 Sobic001G501400--Sobic006G193300 Sobic008G011000 Sobic008G011000 Sobic001G503900--Sobic008G011000 Sobic001G503900--Sobic003G156500 Sobic002G316600 Sobic002G316600 Sobic001G503900--Sobic002G316600 Sobic001G503900--Sobic003G260400 Sobic001G503900--Sobic008G185800 Sobic010G169600 Sobic010G169600 Sobic001G503900--Sobic010G169600 Sobic006G184900 Sobic006G184900 Sobic001G503900--Sobic006G184900 Sobic010G136200 Sobic010G136200 Sobic001G503900--Sobic010G136200 Sobic002G388500 Sobic002G388500 Sobic001G503900--Sobic002G388500 Sobic002G398700 Sobic002G398700 Sobic003G222000--Sobic002G398700 Sobic010G081700 Sobic010G081700 Sobic003G222000--Sobic010G081700 Sobic002G395700 Sobic002G395700 Sobic003G222000--Sobic002G395700 Sobic002G369701 Sobic002G369701 Sobic003G222000--Sobic002G369701 Sobic003G222000--Sobic001G206500 Sobic001G015400 Sobic001G015400 Sobic003G222000--Sobic001G015400 Sobic003G222000--Sobic002G279800 Sobic010G091400 Sobic010G091400 Sobic003G222000--Sobic010G091400 Sobic006G106300 Sobic006G106300 Sobic003G222000--Sobic006G106300 Sobic007G126500 Sobic007G126500 Sobic006G013100--Sobic007G126500 Sobic005G000300 Sobic005G000300 Sobic006G013100--Sobic005G000300 Sobic001G393900 Sobic001G393900 Sobic006G013100--Sobic001G393900 Sobic006G269800 Sobic006G269800 Sobic006G013100--Sobic006G269800 Sobic007G014800 Sobic007G014800 Sobic006G013100--Sobic007G014800 Sobic001G417500 Sobic001G417500 Sobic006G013100--Sobic001G417500 Sobic006G013100--Sobic003G042400 Sobic006G226300 Sobic006G226300 Sobic006G013100--Sobic006G226300 Sobic006G013100--Sobic001G173800 Sobic009G217200--Sobic003G156500 Sobic006G221600 Sobic006G221600 Sobic009G217200--Sobic006G221600 Sobic009G217200--Sobic010G003400 Sobic009G217200--Sobic001G453400 Sobic002G234300 Sobic002G234300 Sobic009G217200--Sobic002G234300 Sobic009G217200--Sobic008G049100 Sobic009G246500 Sobic009G246500 Sobic009G217200--Sobic009G246500 Sobic002G071400 Sobic002G071400 Sobic009G217200--Sobic002G071400 Sobic010G114900 Sobic010G114900 Sobic009G217200--Sobic010G114900 Sobic009G042100 Sobic009G042100 Sobic001G206500--Sobic009G042100 Sobic001G455800 Sobic001G455800 Sobic001G206500--Sobic001G455800 Sobic003G004300 Sobic003G004300 Sobic001G206500--Sobic003G004300 Sobic001G098400 Sobic001G098400 Sobic001G206500--Sobic001G098400 Sobic001G206500--Sobic003G222000 Sobic001G206500--Sobic010G081700 Sobic004G031300 Sobic004G031300 Sobic001G206500--Sobic004G031300 Sobic002G428100 Sobic002G428100 Sobic001G206500--Sobic002G428100 Sobic001G004100 Sobic001G004100 Sobic001G206500--Sobic001G004100 Sobic008G038600 Sobic008G038600 Sobic002G317100--Sobic008G038600 Sobic002G317100--Sobic006G128400 Sobic002G317100--Sobic001G393900 Sobic002G155000 Sobic002G155000 Sobic002G317100--Sobic002G155000 Sobic003G308500 Sobic003G308500 Sobic002G317100--Sobic003G308500 Sobic010G115400 Sobic010G115400 Sobic002G317100--Sobic010G115400 Sobic002G317100--Sobic006G193300 Sobic002G317100--Sobic006G269800 Sobic001G178300 Sobic001G178300 Sobic002G317100--Sobic001G178300
Octagon: transcription factors


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