Gene annotation
Transcriptome id Sobic.001G503900.1
Synonym EMB1691, Sb01g047070
Functional annotation MT-A70 domain containing protein, expressed
UniProt C5WXX9
Pfam PF05063
Panther DB PTHR13107 PTHR13107:SF0
NCBI CDD KOG2097; Predicted N6-adenine methylase involved in transcription regulation
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0006139nucleobase-containing compound metabolic process


Orthologs (automatic annotation)
TAIR AT4G09980 : Methyltransferase MT-A70 family protein
RAP-DB (Rice) LOC_Os01g16180.2 : MT-A70 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000652 , Zm00025a017367
Brachypodium KQJ96918 , KQK23654 , KQK23653 , PNT67473
Barley HORVU4Hr1G079900.3 , HORVU4Hr1G079900.2 , HORVU4Hr1G079900.1
Wheat TraesCS4D02G311200 , TraesCS4D02G311200 , TraesCS4B02G314000 , TraesCS4A02G413300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G011000 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
2 Sobic.003G156500 WD domain, G-beta repeat domain containing protein, expressed K14824: ERB1, ribosome biogenesis protein ERB1
3 Sobic.002G316600 expressed protein -
4 Sobic.003G260400 ATP dependent DNA ligase family protein, putative, expressed K10747: DNA ligase 1
5 Sobic.008G185800 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
6 Sobic.010G169600 OsCML2 - Calmodulin-related calcium sensor protein, expressed -
7 Sobic.006G184900 tetratricopeptide repeat domain containing protein, expressed K15176: RNA polymerase-associated protein CTR9
8 Sobic.010G136200 oxidoreductase/ transition metal ion binding protein, putative, expressed -
9 Sobic.002G388500 SART-1 family protein, putative, expressed K11984: SART1, HAF, U4/U6.U5 tri-snRNP-associated protein 1
10 Sobic.002G127550 - -
11 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
12 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
13 Sobic.007G212300 RNA recognition motif containing protein, putative, expressed -
14 Sobic.002G308700 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
15 Sobic.002G279800 M phase phosphoprotein 10, putative, expressed K14559: U3 small nucleolar RNA-associated protein MPP10
16 Sobic.003G168100 BZIP protein, putative, expressed -
17 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
18 Sobic.001G453400 CCAAT/enhancer-binding protein, putative, expressed K14832: MAK21, NOC1, ribosome biogenesis protein MAK21
19 Sobic.005G122700 PPR repeat domain containing protein, putative, expressed -
20 Sobic.008G044100 expressed protein -


Gene co-expression network
sample Sobic001G503900 Sobic001G503900 Sobic008G011000 Sobic008G011000 Sobic001G503900--Sobic008G011000 Sobic003G156500 Sobic003G156500 Sobic001G503900--Sobic003G156500 Sobic002G316600 Sobic002G316600 Sobic001G503900--Sobic002G316600 Sobic003G260400 Sobic003G260400 Sobic001G503900--Sobic003G260400 Sobic008G185800 Sobic008G185800 Sobic001G503900--Sobic008G185800 Sobic010G169600 Sobic010G169600 Sobic001G503900--Sobic010G169600 Sobic006G184900 Sobic006G184900 Sobic001G503900--Sobic006G184900 Sobic010G136200 Sobic010G136200 Sobic001G503900--Sobic010G136200 Sobic002G388500 Sobic002G388500 Sobic001G503900--Sobic002G388500 Sobic008G011000--Sobic001G503900 Sobic008G011000--Sobic002G316600 Sobic008G044100 Sobic008G044100 Sobic008G011000--Sobic008G044100 Sobic001G072500 Sobic001G072500 Sobic008G011000--Sobic001G072500 Sobic004G314000 Sobic004G314000 Sobic008G011000--Sobic004G314000 Sobic007G212300 Sobic007G212300 Sobic008G011000--Sobic007G212300 Sobic008G011000--Sobic003G260400 Sobic002G127550 Sobic002G127550 Sobic008G011000--Sobic002G127550 Sobic001G230000 Sobic001G230000 Sobic008G011000--Sobic001G230000 Sobic001G453400 Sobic001G453400 Sobic003G156500--Sobic001G453400 Sobic009G217200 Sobic009G217200 Sobic003G156500--Sobic009G217200 Sobic001G501400 Sobic001G501400 Sobic003G156500--Sobic001G501400 Sobic010G003400 Sobic010G003400 Sobic003G156500--Sobic010G003400 Sobic003G156500--Sobic003G260400 Sobic003G156500--Sobic001G503900 Sobic001G358600 Sobic001G358600 Sobic003G156500--Sobic001G358600 Sobic010G102600 Sobic010G102600 Sobic003G156500--Sobic010G102600 Sobic004G320500 Sobic004G320500 Sobic003G156500--Sobic004G320500 Sobic007G103100 Sobic007G103100 Sobic002G316600--Sobic007G103100 Sobic001G527800 Sobic001G527800 Sobic002G316600--Sobic001G527800 Sobic003G186000 Sobic003G186000 Sobic002G316600--Sobic003G186000 Sobic004G276400 Sobic004G276400 Sobic002G316600--Sobic004G276400 Sobic001G529600 Sobic001G529600 Sobic002G316600--Sobic001G529600 Sobic003G166750 Sobic003G166750 Sobic002G316600--Sobic003G166750 Sobic001G194200 Sobic001G194200 Sobic002G316600--Sobic001G194200 Sobic001G289800 Sobic001G289800 Sobic002G316600--Sobic001G289800 Sobic010G079500 Sobic010G079500 Sobic002G316600--Sobic010G079500 Sobic003G260400--Sobic010G079500 Sobic003G095900 Sobic003G095900 Sobic003G260400--Sobic003G095900 Sobic002G399800 Sobic002G399800 Sobic003G260400--Sobic002G399800 Sobic003G101700 Sobic003G101700 Sobic003G260400--Sobic003G101700 Sobic003G260400--Sobic002G316600 Sobic003G260400--Sobic010G003400 Sobic001G089600 Sobic001G089600 Sobic003G260400--Sobic001G089600 Sobic003G260400--Sobic001G453400 Sobic001G393900 Sobic001G393900 Sobic003G260400--Sobic001G393900 Sobic006G093300 Sobic006G093300 Sobic008G185800--Sobic006G093300 Sobic009G192300 Sobic009G192300 Sobic008G185800--Sobic009G192300 Sobic003G241700 Sobic003G241700 Sobic008G185800--Sobic003G241700 Sobic008G185800--Sobic006G184900 Sobic001G030000 Sobic001G030000 Sobic008G185800--Sobic001G030000 Sobic010G226000 Sobic010G226000 Sobic008G185800--Sobic010G226000 Sobic010G275400 Sobic010G275400 Sobic008G185800--Sobic010G275400 Sobic008G185800--Sobic001G503900 Sobic010G169900 Sobic010G169900 Sobic008G185800--Sobic010G169900 Sobic010G169600--Sobic003G186000 Sobic010G169600--Sobic004G276400 Sobic008G098900 Sobic008G098900 Sobic010G169600--Sobic008G098900 Sobic001G370900 Sobic001G370900 Sobic010G169600--Sobic001G370900 Sobic002G308700 Sobic002G308700 Sobic010G169600--Sobic002G308700 Sobic008G085300 Sobic008G085300 Sobic010G169600--Sobic008G085300 Sobic010G169600--Sobic006G184900 Sobic004G223000 Sobic004G223000 Sobic010G169600--Sobic004G223000 Sobic005G162500 Sobic005G162500 Sobic010G169600--Sobic005G162500 Sobic002G335600 Sobic002G335600 Sobic006G184900--Sobic002G335600 Sobic002G429300 Sobic002G429300 Sobic006G184900--Sobic002G429300 Sobic008G088872 Sobic008G088872 Sobic006G184900--Sobic008G088872 Sobic002G042600 Sobic002G042600 Sobic006G184900--Sobic002G042600 Sobic006G184900--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic006G184900--Sobic009G131300 Sobic001G493700 Sobic001G493700 Sobic006G184900--Sobic001G493700 Sobic002G179400 Sobic002G179400 Sobic006G184900--Sobic002G179400 Sobic005G062200 Sobic005G062200 Sobic006G184900--Sobic005G062200 Sobic003G352500 Sobic003G352500 Sobic010G136200--Sobic003G352500 Sobic004G163800 Sobic004G163800 Sobic010G136200--Sobic004G163800 Sobic002G043600 Sobic002G043600 Sobic010G136200--Sobic002G043600 Sobic005G084500 Sobic005G084500 Sobic010G136200--Sobic005G084500 Sobic003G232700 Sobic003G232700 Sobic010G136200--Sobic003G232700 Sobic010G136200--Sobic002G127550 Sobic003G067100 Sobic003G067100 Sobic010G136200--Sobic003G067100 Sobic010G136200--Sobic008G011000 Sobic003G301300 Sobic003G301300 Sobic010G136200--Sobic003G301300 Sobic009G126300 Sobic009G126300 Sobic002G388500--Sobic009G126300 Sobic009G182600 Sobic009G182600 Sobic002G388500--Sobic009G182600 Sobic010G078900 Sobic010G078900 Sobic002G388500--Sobic010G078900 Sobic003G252100 Sobic003G252100 Sobic002G388500--Sobic003G252100 Sobic002G388500--Sobic008G011000 Sobic002G388500--Sobic001G493700 Sobic002G388500--Sobic004G223000 Sobic004G088501 Sobic004G088501 Sobic002G388500--Sobic004G088501 Sobic002G388500--Sobic001G230000
Octagon: transcription factors


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