Gene annotation
Transcriptome id Sobic.002G278600.1
Synonym Sb02g031150
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt C5X6U8
Pfam PF00160
Panther DB PTHR11071 PTHR11071:SF203
NCBI CDD KOG0880; Peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT4G34960 : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os09g36670.1 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a049342
Brachypodium KQJ91232 , KQJ91231
Barley HORVU5Hr1G083310.10 , HORVU2Hr1G069270.32 , HORVU2Hr1G069270.33 , HORVU2Hr1G069270.4 , HORVU5Hr1G083310.8 , HORVU5Hr1G083310.9 , HORVU5Hr1G083310.6 , HORVU5Hr1G083310.7 , HORVU5Hr1G083310.4 , HORVU5Hr1G083310.5 , HORVU5Hr1G083310.2 , HORVU5Hr1G083310.3 , HORVU5Hr1G083310.1 , HORVU2Hr1G069270.14 , HORVU2Hr1G069270.17
Wheat TraesCS5A02G328900 , TraesCS5B02G329000 , TraesCS5D02G334800 , TraesCS5D02G334800
Populus -


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cDNA sequences
Sobic.002G278600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G350200 KH domain containing protein, putative, expressed K14944: RNA-binding protein Nova
2 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
3 Sobic.002G329700 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
4 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
5 Sobic.006G120200 Rf1, mitochondrial precursor, putative, expressed -
6 Sobic.003G396800 expressed protein K17413: small subunit ribosomal protein S35
7 Sobic.008G050700 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
8 Sobic.010G038900 expressed protein -
9 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
10 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
11 Sobic.004G272900 expressed protein -
12 Sobic.002G046300 expressed protein -
13 Sobic.003G295700 hydrolase, acting on carbon-nitrogen, putative, expressed -
14 Sobic.003G004600 expressed protein -
15 Sobic.001G432100 expressed protein -
16 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
17 Sobic.003G206600 glycine-rich protein, putative, expressed -
18 Sobic.003G122800 translin, putative, expressed -
19 Sobic.007G039300 ATP-binding region, ATPase-like domain containing protein, expressed -
20 Sobic.009G228600 CHCH domain containing protein, expressed K18183: cytochrome c oxidase assembly protein subunit 19


Gene co-expression network
sample Sobic002G278600 Sobic002G278600 Sobic004G350200 Sobic004G350200 Sobic002G278600--Sobic004G350200 Sobic010G059700 Sobic010G059700 Sobic002G278600--Sobic010G059700 Sobic002G329700 Sobic002G329700 Sobic002G278600--Sobic002G329700 Sobic002G306600 Sobic002G306600 Sobic002G278600--Sobic002G306600 Sobic006G120200 Sobic006G120200 Sobic002G278600--Sobic006G120200 Sobic003G396800 Sobic003G396800 Sobic002G278600--Sobic003G396800 Sobic008G050700 Sobic008G050700 Sobic002G278600--Sobic008G050700 Sobic010G038900 Sobic010G038900 Sobic002G278600--Sobic010G038900 Sobic009G063800 Sobic009G063800 Sobic002G278600--Sobic009G063800 Sobic004G350200--Sobic010G038900 Sobic004G000400 Sobic004G000400 Sobic004G350200--Sobic004G000400 Sobic005G160200 Sobic005G160200 Sobic004G350200--Sobic005G160200 Sobic007G036800 Sobic007G036800 Sobic004G350200--Sobic007G036800 Sobic004G063300 Sobic004G063300 Sobic004G350200--Sobic004G063300 Sobic001G123600 Sobic001G123600 Sobic004G350200--Sobic001G123600 Sobic004G350200--Sobic009G063800 Sobic006G106600 Sobic006G106600 Sobic004G350200--Sobic006G106600 Sobic001G229300 Sobic001G229300 Sobic004G350200--Sobic001G229300 Sobic010G059700--Sobic007G036800 Sobic010G059700--Sobic002G306600 Sobic010G059700--Sobic009G063800 Sobic003G224300 Sobic003G224300 Sobic010G059700--Sobic003G224300 Sobic007G146600 Sobic007G146600 Sobic010G059700--Sobic007G146600 Sobic003G222700 Sobic003G222700 Sobic010G059700--Sobic003G222700 Sobic003G148900 Sobic003G148900 Sobic010G059700--Sobic003G148900 Sobic004G145600 Sobic004G145600 Sobic010G059700--Sobic004G145600 Sobic007G022700 Sobic007G022700 Sobic010G059700--Sobic007G022700 Sobic002G088100 Sobic002G088100 Sobic002G329700--Sobic002G088100 Sobic002G329700--Sobic002G278600 Sobic002G329700--Sobic003G396800 Sobic003G295700 Sobic003G295700 Sobic002G329700--Sobic003G295700 Sobic004G010700 Sobic004G010700 Sobic002G329700--Sobic004G010700 Sobic010G241600 Sobic010G241600 Sobic002G329700--Sobic010G241600 Sobic004G288100 Sobic004G288100 Sobic002G329700--Sobic004G288100 Sobic002G329700--Sobic006G120200 Sobic006G129000 Sobic006G129000 Sobic002G329700--Sobic006G129000 Sobic003G004600 Sobic003G004600 Sobic002G306600--Sobic003G004600 Sobic002G306600--Sobic010G059700 Sobic001G458200 Sobic001G458200 Sobic002G306600--Sobic001G458200 Sobic003G128300 Sobic003G128300 Sobic002G306600--Sobic003G128300 Sobic001G157600 Sobic001G157600 Sobic002G306600--Sobic001G157600 Sobic003G221500 Sobic003G221500 Sobic002G306600--Sobic003G221500 Sobic002G267400 Sobic002G267400 Sobic002G306600--Sobic002G267400 Sobic001G487100 Sobic001G487100 Sobic002G306600--Sobic001G487100 Sobic004G088700 Sobic004G088700 Sobic002G306600--Sobic004G088700 Sobic001G432100 Sobic001G432100 Sobic006G120200--Sobic001G432100 Sobic004G348600 Sobic004G348600 Sobic006G120200--Sobic004G348600 Sobic006G120200--Sobic002G278600 Sobic003G206600 Sobic003G206600 Sobic006G120200--Sobic003G206600 Sobic006G120200--Sobic003G396800 Sobic002G280900 Sobic002G280900 Sobic006G120200--Sobic002G280900 Sobic004G067400 Sobic004G067400 Sobic006G120200--Sobic004G067400 Sobic005G132700 Sobic005G132700 Sobic006G120200--Sobic005G132700 Sobic006G120200--Sobic010G059700 Sobic001G143900 Sobic001G143900 Sobic003G396800--Sobic001G143900 Sobic009G228600 Sobic009G228600 Sobic003G396800--Sobic009G228600 Sobic003G396800--Sobic009G063800 Sobic002G182000 Sobic002G182000 Sobic003G396800--Sobic002G182000 Sobic003G120700 Sobic003G120700 Sobic003G396800--Sobic003G120700 Sobic001G203600 Sobic001G203600 Sobic003G396800--Sobic001G203600 Sobic001G033600 Sobic001G033600 Sobic003G396800--Sobic001G033600 Sobic002G193500 Sobic002G193500 Sobic003G396800--Sobic002G193500 Sobic003G004800 Sobic003G004800 Sobic003G396800--Sobic003G004800 Sobic007G140600 Sobic007G140600 Sobic008G050700--Sobic007G140600 Sobic008G050700--Sobic009G063800 Sobic002G377200 Sobic002G377200 Sobic008G050700--Sobic002G377200 Sobic001G025700 Sobic001G025700 Sobic008G050700--Sobic001G025700 Sobic002G222200 Sobic002G222200 Sobic008G050700--Sobic002G222200 Sobic008G149500 Sobic008G149500 Sobic008G050700--Sobic008G149500 Sobic010G069500 Sobic010G069500 Sobic008G050700--Sobic010G069500 Sobic002G186500 Sobic002G186500 Sobic008G050700--Sobic002G186500 Sobic003G308300 Sobic003G308300 Sobic008G050700--Sobic003G308300 Sobic006G184200 Sobic006G184200 Sobic010G038900--Sobic006G184200 Sobic002G066800 Sobic002G066800 Sobic010G038900--Sobic002G066800 Sobic010G038900--Sobic004G350200 Sobic008G087200 Sobic008G087200 Sobic010G038900--Sobic008G087200 Sobic010G257500 Sobic010G257500 Sobic010G038900--Sobic010G257500 Sobic010G018900 Sobic010G018900 Sobic010G038900--Sobic010G018900 Sobic010G038900--Sobic005G160200 Sobic010G038900--Sobic004G063300 Sobic010G009600 Sobic010G009600 Sobic010G038900--Sobic010G009600 Sobic009G063800--Sobic002G182000 Sobic010G250000 Sobic010G250000 Sobic009G063800--Sobic010G250000 Sobic009G063800--Sobic007G146600 Sobic001G309200 Sobic001G309200 Sobic009G063800--Sobic001G309200 Sobic002G322400 Sobic002G322400 Sobic009G063800--Sobic002G322400 Sobic009G063800--Sobic010G018900 Sobic009G063800--Sobic001G203600 Sobic002G348400 Sobic002G348400 Sobic009G063800--Sobic002G348400 Sobic008G072500 Sobic008G072500 Sobic009G063800--Sobic008G072500
Octagon: transcription factors


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