Gene annotation
Transcriptome id Sobic.009G228600.1
Synonym Sb09g028140, COX19-2, ATCOX19-2
Functional annotation CHCH domain containing protein, expressed
UniProt C5YVG4
Pfam PF06747
Panther DB PTHR21107
NCBI CDD KOG3477; Putative cytochrome c oxidase, subunit COX19
KEGG Orthology K18183; cytochrome c oxidase assembly protein subunit 19
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69750 : cytochrome c oxidase 19-2
RAP-DB (Rice) LOC_Os02g20940.2 : CHCH domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044527 , Zm00025a000369
Brachypodium -
Barley HORVU2Hr1G031210.1 , HORVU2Hr1G031210.3 , HORVU2Hr1G031210.2 , HORVU2Hr1G031210.4 , HORVU1Hr1G085740.8 , HORVU1Hr1G085740.2 , HORVU1Hr1G085740.1 , HORVU1Hr1G085740.4 , HORVU1Hr1G085740.18 , HORVU1Hr1G085740.13 , HORVU1Hr1G085740.12 , HORVU1Hr1G085740.17 , HORVU1Hr1G085740.16 , HORVU1Hr1G085740.15 , HORVU1Hr1G085740.14 , HORVU1Hr1G085740.22 , HORVU1Hr1G085740.20 , HORVU1Hr1G085740.21 , HORVU1Hr1G085740.24
Wheat TraesCS1A02G389000 , TraesCS1D02G397000
Populus -


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cDNA sequences
Sobic.009G228600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G396800 expressed protein K17413: small subunit ribosomal protein S35
2 Sobic.001G143900 expressed protein -
3 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
4 Sobic.008G050700 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
5 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
6 Sobic.001G282200 ribosomal protein L35, putative, expressed -
7 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
8 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
9 Sobic.001G203600 PPR repeat domain containing protein, putative, expressed -
10 Sobic.003G120700 glycosyl transferase, group 1 domain containing protein, expressed -
11 Sobic.008G022400 EMB2748, putative, expressed -
12 Sobic.001G413100 nucleotide binding protein, putative, expressed -
13 Sobic.010G250000 60S ribosomal protein L8, putative, expressed -
14 Sobic.001G167500 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
15 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
16 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -
17 Sobic.008G072500 SAM-dependent methyltransferase, putative, expressed K18162: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5
18 Sobic.004G002500 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
19 Sobic.002G278600 peptidyl-prolyl cis-trans isomerase, putative, expressed -
20 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46


Gene co-expression network
sample Sobic009G228600 Sobic009G228600 Sobic003G396800 Sobic003G396800 Sobic009G228600--Sobic003G396800 Sobic001G143900 Sobic001G143900 Sobic009G228600--Sobic001G143900 Sobic009G063800 Sobic009G063800 Sobic009G228600--Sobic009G063800 Sobic008G050700 Sobic008G050700 Sobic009G228600--Sobic008G050700 Sobic003G113400 Sobic003G113400 Sobic009G228600--Sobic003G113400 Sobic001G282200 Sobic001G282200 Sobic009G228600--Sobic001G282200 Sobic002G182000 Sobic002G182000 Sobic009G228600--Sobic002G182000 Sobic008G018300 Sobic008G018300 Sobic009G228600--Sobic008G018300 Sobic001G203600 Sobic001G203600 Sobic009G228600--Sobic001G203600 Sobic003G396800--Sobic001G143900 Sobic003G396800--Sobic009G228600 Sobic003G396800--Sobic009G063800 Sobic003G396800--Sobic002G182000 Sobic003G120700 Sobic003G120700 Sobic003G396800--Sobic003G120700 Sobic003G396800--Sobic001G203600 Sobic001G033600 Sobic001G033600 Sobic003G396800--Sobic001G033600 Sobic002G193500 Sobic002G193500 Sobic003G396800--Sobic002G193500 Sobic003G004800 Sobic003G004800 Sobic003G396800--Sobic003G004800 Sobic002G213900 Sobic002G213900 Sobic001G143900--Sobic002G213900 Sobic001G143900--Sobic003G396800 Sobic002G397900 Sobic002G397900 Sobic001G143900--Sobic002G397900 Sobic001G280500 Sobic001G280500 Sobic001G143900--Sobic001G280500 Sobic001G143900--Sobic003G004800 Sobic002G414800 Sobic002G414800 Sobic001G143900--Sobic002G414800 Sobic003G260600 Sobic003G260600 Sobic001G143900--Sobic003G260600 Sobic010G086300 Sobic010G086300 Sobic001G143900--Sobic010G086300 Sobic002G348400 Sobic002G348400 Sobic001G143900--Sobic002G348400 Sobic009G063800--Sobic002G182000 Sobic010G250000 Sobic010G250000 Sobic009G063800--Sobic010G250000 Sobic007G146600 Sobic007G146600 Sobic009G063800--Sobic007G146600 Sobic001G309200 Sobic001G309200 Sobic009G063800--Sobic001G309200 Sobic002G322400 Sobic002G322400 Sobic009G063800--Sobic002G322400 Sobic010G018900 Sobic010G018900 Sobic009G063800--Sobic010G018900 Sobic009G063800--Sobic001G203600 Sobic009G063800--Sobic002G348400 Sobic008G072500 Sobic008G072500 Sobic009G063800--Sobic008G072500 Sobic007G140600 Sobic007G140600 Sobic008G050700--Sobic007G140600 Sobic008G050700--Sobic009G063800 Sobic002G377200 Sobic002G377200 Sobic008G050700--Sobic002G377200 Sobic001G025700 Sobic001G025700 Sobic008G050700--Sobic001G025700 Sobic002G222200 Sobic002G222200 Sobic008G050700--Sobic002G222200 Sobic008G149500 Sobic008G149500 Sobic008G050700--Sobic008G149500 Sobic010G069500 Sobic010G069500 Sobic008G050700--Sobic010G069500 Sobic002G186500 Sobic002G186500 Sobic008G050700--Sobic002G186500 Sobic003G308300 Sobic003G308300 Sobic008G050700--Sobic003G308300 Sobic003G167000 Sobic003G167000 Sobic003G113400--Sobic003G167000 Sobic009G041800 Sobic009G041800 Sobic003G113400--Sobic009G041800 Sobic004G334200 Sobic004G334200 Sobic003G113400--Sobic004G334200 Sobic007G191600 Sobic007G191600 Sobic003G113400--Sobic007G191600 Sobic003G113400--Sobic001G203600 Sobic004G043600 Sobic004G043600 Sobic003G113400--Sobic004G043600 Sobic002G402500 Sobic002G402500 Sobic003G113400--Sobic002G402500 Sobic003G113400--Sobic010G250000 Sobic001G052100 Sobic001G052100 Sobic003G113400--Sobic001G052100 Sobic001G282200--Sobic003G260600 Sobic002G420600 Sobic002G420600 Sobic001G282200--Sobic002G420600 Sobic003G089100 Sobic003G089100 Sobic001G282200--Sobic003G089100 Sobic003G201500 Sobic003G201500 Sobic001G282200--Sobic003G201500 Sobic002G255400 Sobic002G255400 Sobic001G282200--Sobic002G255400 Sobic001G282200--Sobic008G018300 Sobic001G282200--Sobic002G397900 Sobic003G013700 Sobic003G013700 Sobic001G282200--Sobic003G013700 Sobic004G100100 Sobic004G100100 Sobic001G282200--Sobic004G100100 Sobic002G182000--Sobic009G063800 Sobic002G399900 Sobic002G399900 Sobic002G182000--Sobic002G399900 Sobic001G343000 Sobic001G343000 Sobic002G182000--Sobic001G343000 Sobic002G182000--Sobic001G203600 Sobic002G182000--Sobic007G146600 Sobic003G130900 Sobic003G130900 Sobic002G182000--Sobic003G130900 Sobic002G066800 Sobic002G066800 Sobic002G182000--Sobic002G066800 Sobic010G172400 Sobic010G172400 Sobic002G182000--Sobic010G172400 Sobic003G113300 Sobic003G113300 Sobic002G182000--Sobic003G113300 Sobic008G018300--Sobic002G255400 Sobic002G352200 Sobic002G352200 Sobic008G018300--Sobic002G352200 Sobic001G387200 Sobic001G387200 Sobic008G018300--Sobic001G387200 Sobic004G173700 Sobic004G173700 Sobic008G018300--Sobic004G173700 Sobic008G018300--Sobic002G420600 Sobic008G018300--Sobic003G260600 Sobic008G018300--Sobic001G282200 Sobic003G129900 Sobic003G129900 Sobic008G018300--Sobic003G129900 Sobic003G016300 Sobic003G016300 Sobic008G018300--Sobic003G016300 Sobic001G203600--Sobic010G086300 Sobic001G117900 Sobic001G117900 Sobic001G203600--Sobic001G117900 Sobic007G204000 Sobic007G204000 Sobic001G203600--Sobic007G204000 Sobic001G203600--Sobic001G052100 Sobic001G203600--Sobic008G072500 Sobic007G226800 Sobic007G226800 Sobic001G203600--Sobic007G226800 Sobic001G203600--Sobic002G182000 Sobic006G220400 Sobic006G220400 Sobic001G203600--Sobic006G220400 Sobic001G203600--Sobic009G063800
Octagon: transcription factors


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