Gene annotation
Transcriptome id Sobic.003G295700.1,Sobic.003G295700.2
Synonym Sb03g034610
Functional annotation hydrolase, acting on carbon-nitrogen, putative, expressed
UniProt A0A1W0VZJ5 , C5XK38
Pfam PF04765
Panther DB PTHR12956 PTHR12956:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42660 : Protein of unknown function (DUF616)
RAP-DB (Rice) LOC_Os01g54530.1 : hydrolase, acting on carbon-nitrogen, putative, expressed
MaizeGDB (Corn) Zm00025a027582
Brachypodium KQK09733
Barley HORVU3Hr1G071540.8 , HORVU3Hr1G071540.9 , HORVU3Hr1G071540.4 , HORVU3Hr1G071540.5 , HORVU3Hr1G071540.6 , HORVU3Hr1G071540.7 , HORVU3Hr1G071540.1 , HORVU3Hr1G071540.2 , HORVU3Hr1G071540.3
Wheat TraesCS3A02G272300 , TraesCS3A02G272300 , TraesCS3B02G306100 , TraesCS3B02G306100 , TraesCS3D02G271900 , TraesCS3D02G271900
Populus -


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cDNA sequences
Sobic.003G295700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G332200 proteasome inhibitor-related, putative, expressed K06700: proteasome inhibitor subunit 1 (PI31)
2 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
3 Sobic.002G329700 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
4 Sobic.003G122800 translin, putative, expressed -
5 Sobic.002G278600 peptidyl-prolyl cis-trans isomerase, putative, expressed -
6 Sobic.001G286100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
7 Sobic.008G118300 expressed protein -
8 Sobic.008G017700 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
9 Sobic.009G224600 SNARE domain containing protein, putative, expressed K08506: syntaxin of plants SYP7
10 Sobic.004G033200 expressed protein -
11 Sobic.004G160800 inositol hexaphosphate kinase, putative, expressed K00915: IPMK, inositol-polyphosphate multikinase
12 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
13 Sobic.009G028100 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
14 Sobic.003G118400 expressed protein -
15 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
16 Sobic.009G169200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
17 Sobic.002G000300 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
18 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
19 Sobic.004G186100 expressed protein -
20 Sobic.003G179000 dienelactone hydrolase family protein, expressed K01061: carboxymethylenebutenolidase


Gene co-expression network
sample Sobic003G295700 Sobic003G295700 Sobic002G332200 Sobic002G332200 Sobic003G295700--Sobic002G332200 Sobic009G206600 Sobic009G206600 Sobic003G295700--Sobic009G206600 Sobic002G329700 Sobic002G329700 Sobic003G295700--Sobic002G329700 Sobic003G122800 Sobic003G122800 Sobic003G295700--Sobic003G122800 Sobic002G278600 Sobic002G278600 Sobic003G295700--Sobic002G278600 Sobic001G286100 Sobic001G286100 Sobic003G295700--Sobic001G286100 Sobic008G118300 Sobic008G118300 Sobic003G295700--Sobic008G118300 Sobic008G017700 Sobic008G017700 Sobic003G295700--Sobic008G017700 Sobic009G224600 Sobic009G224600 Sobic003G295700--Sobic009G224600 Sobic002G332200--Sobic003G295700 Sobic003G408300 Sobic003G408300 Sobic002G332200--Sobic003G408300 Sobic009G169200 Sobic009G169200 Sobic002G332200--Sobic009G169200 Sobic002G116500 Sobic002G116500 Sobic002G332200--Sobic002G116500 Sobic004G033200 Sobic004G033200 Sobic002G332200--Sobic004G033200 Sobic009G028100 Sobic009G028100 Sobic002G332200--Sobic009G028100 Sobic008G116600 Sobic008G116600 Sobic002G332200--Sobic008G116600 Sobic003G121800 Sobic003G121800 Sobic002G332200--Sobic003G121800 Sobic001G460100 Sobic001G460100 Sobic002G332200--Sobic001G460100 Sobic004G039400 Sobic004G039400 Sobic009G206600--Sobic004G039400 Sobic002G387800 Sobic002G387800 Sobic009G206600--Sobic002G387800 Sobic001G073600 Sobic001G073600 Sobic009G206600--Sobic001G073600 Sobic006G203900 Sobic006G203900 Sobic009G206600--Sobic006G203900 Sobic003G388700 Sobic003G388700 Sobic009G206600--Sobic003G388700 Sobic004G186100 Sobic004G186100 Sobic009G206600--Sobic004G186100 Sobic007G003100 Sobic007G003100 Sobic009G206600--Sobic007G003100 Sobic008G018300 Sobic008G018300 Sobic009G206600--Sobic008G018300 Sobic002G217500 Sobic002G217500 Sobic009G206600--Sobic002G217500 Sobic002G088100 Sobic002G088100 Sobic002G329700--Sobic002G088100 Sobic002G329700--Sobic002G278600 Sobic003G396800 Sobic003G396800 Sobic002G329700--Sobic003G396800 Sobic002G329700--Sobic003G295700 Sobic004G010700 Sobic004G010700 Sobic002G329700--Sobic004G010700 Sobic010G241600 Sobic010G241600 Sobic002G329700--Sobic010G241600 Sobic004G288100 Sobic004G288100 Sobic002G329700--Sobic004G288100 Sobic006G120200 Sobic006G120200 Sobic002G329700--Sobic006G120200 Sobic006G129000 Sobic006G129000 Sobic002G329700--Sobic006G129000 Sobic002G367200 Sobic002G367200 Sobic003G122800--Sobic002G367200 Sobic008G162100 Sobic008G162100 Sobic003G122800--Sobic008G162100 Sobic003G122800--Sobic009G028100 Sobic003G129300 Sobic003G129300 Sobic003G122800--Sobic003G129300 Sobic002G095300 Sobic002G095300 Sobic003G122800--Sobic002G095300 Sobic003G326500 Sobic003G326500 Sobic003G122800--Sobic003G326500 Sobic003G102700 Sobic003G102700 Sobic003G122800--Sobic003G102700 Sobic003G119900 Sobic003G119900 Sobic003G122800--Sobic003G119900 Sobic007G082000 Sobic007G082000 Sobic003G122800--Sobic007G082000 Sobic004G350200 Sobic004G350200 Sobic002G278600--Sobic004G350200 Sobic010G059700 Sobic010G059700 Sobic002G278600--Sobic010G059700 Sobic002G278600--Sobic002G329700 Sobic002G306600 Sobic002G306600 Sobic002G278600--Sobic002G306600 Sobic002G278600--Sobic006G120200 Sobic002G278600--Sobic003G396800 Sobic008G050700 Sobic008G050700 Sobic002G278600--Sobic008G050700 Sobic010G038900 Sobic010G038900 Sobic002G278600--Sobic010G038900 Sobic009G063800 Sobic009G063800 Sobic002G278600--Sobic009G063800 Sobic004G069400 Sobic004G069400 Sobic001G286100--Sobic004G069400 Sobic001G286100--Sobic008G118300 Sobic003G418400 Sobic003G418400 Sobic001G286100--Sobic003G418400 Sobic007G201000 Sobic007G201000 Sobic001G286100--Sobic007G201000 Sobic010G250000 Sobic010G250000 Sobic001G286100--Sobic010G250000 Sobic001G135200 Sobic001G135200 Sobic001G286100--Sobic001G135200 Sobic006G271000 Sobic006G271000 Sobic001G286100--Sobic006G271000 Sobic001G286100--Sobic009G063800 Sobic001G309200 Sobic001G309200 Sobic001G286100--Sobic001G309200 Sobic008G118300--Sobic001G286100 Sobic002G304400 Sobic002G304400 Sobic008G118300--Sobic002G304400 Sobic004G353500 Sobic004G353500 Sobic008G118300--Sobic004G353500 Sobic008G118300--Sobic008G017700 Sobic004G160800 Sobic004G160800 Sobic008G118300--Sobic004G160800 Sobic010G002800 Sobic010G002800 Sobic008G118300--Sobic010G002800 Sobic008G118300--Sobic003G418400 Sobic002G037600 Sobic002G037600 Sobic008G118300--Sobic002G037600 Sobic008G118300--Sobic006G271000 Sobic008G017700--Sobic008G118300 Sobic007G112100 Sobic007G112100 Sobic008G017700--Sobic007G112100 Sobic009G244900 Sobic009G244900 Sobic008G017700--Sobic009G244900 Sobic007G192500 Sobic007G192500 Sobic008G017700--Sobic007G192500 Sobic009G103400 Sobic009G103400 Sobic008G017700--Sobic009G103400 Sobic008G017700--Sobic003G418400 Sobic005G210500 Sobic005G210500 Sobic008G017700--Sobic005G210500 Sobic008G141900 Sobic008G141900 Sobic008G017700--Sobic008G141900 Sobic008G046000 Sobic008G046000 Sobic008G017700--Sobic008G046000 Sobic010G144900 Sobic010G144900 Sobic009G224600--Sobic010G144900 Sobic003G084300 Sobic003G084300 Sobic009G224600--Sobic003G084300 Sobic010G217100 Sobic010G217100 Sobic009G224600--Sobic010G217100 Sobic009G189200 Sobic009G189200 Sobic009G224600--Sobic009G189200 Sobic001G412500 Sobic001G412500 Sobic009G224600--Sobic001G412500 Sobic009G124200 Sobic009G124200 Sobic009G224600--Sobic009G124200 Sobic006G094100 Sobic006G094100 Sobic009G224600--Sobic006G094100 Sobic009G165500 Sobic009G165500 Sobic009G224600--Sobic009G165500 Sobic001G418000 Sobic001G418000 Sobic009G224600--Sobic001G418000
Octagon: transcription factors


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