Gene annotation
Transcriptome id Sobic.003G304700.1
Synonym Sb03g035330
Functional annotation AGAP003732-PA, putative, expressed
UniProt C5XKU9
Pfam PF10217
Panther DB PTHR22876 PTHR22876:SF5
NCBI CDD KOG3241; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02220 : -
RAP-DB (Rice) LOC_Os01g55730.1 : AGAP003732-PA, putative, expressed
MaizeGDB (Corn) Zm00025a027457
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G262800 WD domain, G-beta repeat domain containing protein, expressed K14553: U3 small nucleolar RNA-associated protein 18
2 Sobic.004G352200 expressed protein -
3 Sobic.009G228500 60S ribosomal protein-related, putative, expressed K14775: UTP30, ribosome biogenesis protein UTP30
4 Sobic.008G117100 expressed protein -
5 Sobic.004G288100 HSPC171 protein, putative, expressed -
6 Sobic.001G465300 splicing factor, putative, expressed -
7 Sobic.002G419100 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
8 Sobic.001G370500 expressed protein K14851: RRP17, ribosomal RNA-processing protein 17
9 Sobic.002G088100 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17778: mitochondrial import inner membrane translocase subunit TIM10
10 Sobic.002G300300 rRNA-processing protein EBP2, putative, expressed K14823: EBP2, rRNA-processing protein EBP2
11 Sobic.002G329700 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
12 Sobic.004G167100 rar1, putative, expressed K13458: disease resistance protein
13 Sobic.009G258600 LSM domain containing protein, expressed K12627: U6 snRNA-associated Sm-like protein LSm8
14 Sobic.003G275600 ribosomal RNA assembly protein mis3, putative, expressed K06961: ribosomal RNA assembly protein
15 Sobic.002G083800 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
16 Sobic.001G199800 MSP domain containing protein, putative, expressed -
17 Sobic.004G069500 expressed protein -
18 Sobic.004G002500 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
19 Sobic.009G213500 NAP domain containing protein, putative, expressed K11279: NAP1L1, nucleosome assembly protein 1-like 1
20 Sobic.001G355000 CS domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G304700 Sobic003G304700 Sobic010G262800 Sobic010G262800 Sobic003G304700--Sobic010G262800 Sobic004G352200 Sobic004G352200 Sobic003G304700--Sobic004G352200 Sobic009G228500 Sobic009G228500 Sobic003G304700--Sobic009G228500 Sobic008G117100 Sobic008G117100 Sobic003G304700--Sobic008G117100 Sobic004G288100 Sobic004G288100 Sobic003G304700--Sobic004G288100 Sobic001G465300 Sobic001G465300 Sobic003G304700--Sobic001G465300 Sobic002G419100 Sobic002G419100 Sobic003G304700--Sobic002G419100 Sobic001G370500 Sobic001G370500 Sobic003G304700--Sobic001G370500 Sobic002G088100 Sobic002G088100 Sobic003G304700--Sobic002G088100 Sobic010G262800--Sobic001G370500 Sobic010G262800--Sobic003G304700 Sobic002G300300 Sobic002G300300 Sobic010G262800--Sobic002G300300 Sobic010G262800--Sobic008G117100 Sobic001G466600 Sobic001G466600 Sobic010G262800--Sobic001G466600 Sobic010G262800--Sobic004G288100 Sobic010G262800--Sobic009G228500 Sobic006G095400 Sobic006G095400 Sobic010G262800--Sobic006G095400 Sobic002G084500 Sobic002G084500 Sobic010G262800--Sobic002G084500 Sobic003G160900 Sobic003G160900 Sobic004G352200--Sobic003G160900 Sobic003G044400 Sobic003G044400 Sobic004G352200--Sobic003G044400 Sobic001G117400 Sobic001G117400 Sobic004G352200--Sobic001G117400 Sobic002G371100 Sobic002G371100 Sobic004G352200--Sobic002G371100 Sobic003G063300 Sobic003G063300 Sobic004G352200--Sobic003G063300 Sobic001G018800 Sobic001G018800 Sobic004G352200--Sobic001G018800 Sobic004G069500 Sobic004G069500 Sobic004G352200--Sobic004G069500 Sobic003G127700 Sobic003G127700 Sobic004G352200--Sobic003G127700 Sobic001G331900 Sobic001G331900 Sobic004G352200--Sobic001G331900 Sobic007G137350 Sobic007G137350 Sobic009G228500--Sobic007G137350 Sobic009G228500--Sobic006G095400 Sobic006G135000 Sobic006G135000 Sobic009G228500--Sobic006G135000 Sobic007G108100 Sobic007G108100 Sobic009G228500--Sobic007G108100 Sobic001G493400 Sobic001G493400 Sobic009G228500--Sobic001G493400 Sobic004G173100 Sobic004G173100 Sobic009G228500--Sobic004G173100 Sobic004G190600 Sobic004G190600 Sobic009G228500--Sobic004G190600 Sobic010G038800 Sobic010G038800 Sobic009G228500--Sobic010G038800 Sobic004G002500 Sobic004G002500 Sobic009G228500--Sobic004G002500 Sobic008G117100--Sobic003G304700 Sobic004G080400 Sobic004G080400 Sobic008G117100--Sobic004G080400 Sobic002G003000 Sobic002G003000 Sobic008G117100--Sobic002G003000 Sobic002G325400 Sobic002G325400 Sobic008G117100--Sobic002G325400 Sobic008G117100--Sobic004G288100 Sobic008G117100--Sobic010G262800 Sobic002G005700 Sobic002G005700 Sobic008G117100--Sobic002G005700 Sobic005G121100 Sobic005G121100 Sobic008G117100--Sobic005G121100 Sobic003G022800 Sobic003G022800 Sobic008G117100--Sobic003G022800 Sobic002G083800 Sobic002G083800 Sobic004G288100--Sobic002G083800 Sobic002G329700 Sobic002G329700 Sobic004G288100--Sobic002G329700 Sobic002G129200 Sobic002G129200 Sobic004G288100--Sobic002G129200 Sobic001G052900 Sobic001G052900 Sobic004G288100--Sobic001G052900 Sobic004G288100--Sobic001G370500 Sobic010G088600 Sobic010G088600 Sobic004G288100--Sobic010G088600 Sobic001G498400 Sobic001G498400 Sobic004G288100--Sobic001G498400 Sobic004G288100--Sobic002G003000 Sobic002G278600 Sobic002G278600 Sobic004G288100--Sobic002G278600 Sobic003G153700 Sobic003G153700 Sobic001G465300--Sobic003G153700 Sobic001G465300--Sobic002G083800 Sobic010G209000 Sobic010G209000 Sobic001G465300--Sobic010G209000 Sobic004G093500 Sobic004G093500 Sobic001G465300--Sobic004G093500 Sobic003G275600 Sobic003G275600 Sobic001G465300--Sobic003G275600 Sobic007G004000 Sobic007G004000 Sobic001G465300--Sobic007G004000 Sobic002G383300 Sobic002G383300 Sobic001G465300--Sobic002G383300 Sobic006G179800 Sobic006G179800 Sobic001G465300--Sobic006G179800 Sobic001G029400 Sobic001G029400 Sobic001G465300--Sobic001G029400 Sobic009G213500 Sobic009G213500 Sobic002G419100--Sobic009G213500 Sobic010G205300 Sobic010G205300 Sobic002G419100--Sobic010G205300 Sobic003G186700 Sobic003G186700 Sobic002G419100--Sobic003G186700 Sobic002G419100--Sobic002G084500 Sobic002G341800 Sobic002G341800 Sobic002G419100--Sobic002G341800 Sobic004G310500 Sobic004G310500 Sobic002G419100--Sobic004G310500 Sobic004G212200 Sobic004G212200 Sobic002G419100--Sobic004G212200 Sobic006G252200 Sobic006G252200 Sobic002G419100--Sobic006G252200 Sobic003G349300 Sobic003G349300 Sobic002G419100--Sobic003G349300 Sobic004G068200 Sobic004G068200 Sobic001G370500--Sobic004G068200 Sobic001G370500--Sobic004G288100 Sobic001G370500--Sobic010G262800 Sobic001G370500--Sobic001G466600 Sobic001G429800 Sobic001G429800 Sobic001G370500--Sobic001G429800 Sobic001G453800 Sobic001G453800 Sobic001G370500--Sobic001G453800 Sobic001G370500--Sobic002G088100 Sobic008G088812 Sobic008G088812 Sobic001G370500--Sobic008G088812 Sobic002G312800 Sobic002G312800 Sobic001G370500--Sobic002G312800 Sobic002G088100--Sobic002G329700 Sobic003G396800 Sobic003G396800 Sobic002G088100--Sobic003G396800 Sobic004G264700 Sobic004G264700 Sobic002G088100--Sobic004G264700 Sobic001G199800 Sobic001G199800 Sobic002G088100--Sobic001G199800 Sobic002G088100--Sobic004G288100 Sobic002G088100--Sobic001G370500 Sobic007G140600 Sobic007G140600 Sobic002G088100--Sobic007G140600 Sobic009G228600 Sobic009G228600 Sobic002G088100--Sobic009G228600 Sobic008G050700 Sobic008G050700 Sobic002G088100--Sobic008G050700
Octagon: transcription factors


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