Gene annotation
Transcriptome id Sobic.002G088100.2
Synonym TIM10, Sb02g007270
Functional annotation mitochondrial import inner membrane translocase subunit Tim, putative, expressed
UniProt A0A1W0W304
Pfam PF02953
Panther DB PTHR11038 PTHR11038:SF17
NCBI CDD KOG3480; Mitochondrial import inner membrane translocase, subunits TIM10/TIM12
KEGG Orthology K17778; mitochondrial import inner membrane translocase subunit TIM10
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G29530 : Tim10/DDP family zinc finger protein
RAP-DB (Rice) LOC_Os03g61019.1 : mitochondrial import inner membrane translocase subunit Tim, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G329700 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
2 Sobic.003G396800 expressed protein K17413: small subunit ribosomal protein S35
3 Sobic.004G264700 ATP synthase F1, delta subunit family protein, putative, expressed K02137: ATPeF0O, ATP5O, F-type H+-transporting ATPase subunit O
4 Sobic.001G199800 MSP domain containing protein, putative, expressed -
5 Sobic.004G288100 HSPC171 protein, putative, expressed -
6 Sobic.001G370500 expressed protein K14851: RRP17, ribosomal RNA-processing protein 17
7 Sobic.007G140600 stromal cell-derived factor 2-like protein precursor, putative, expressed -
8 Sobic.009G228600 CHCH domain containing protein, expressed K18183: cytochrome c oxidase assembly protein subunit 19
9 Sobic.008G050700 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
10 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
11 Sobic.010G047000 transport protein particle component, Bet3, domain containing protein, expressed -
12 Sobic.001G453800 copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
13 Sobic.002G083800 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
14 Sobic.010G188800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
15 Sobic.003G304700 AGAP003732-PA, putative, expressed -
16 Sobic.001G143900 expressed protein -
17 Sobic.001G465300 splicing factor, putative, expressed -
18 Sobic.004G002500 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
19 Sobic.002G278600 peptidyl-prolyl cis-trans isomerase, putative, expressed -
20 Sobic.003G295700 hydrolase, acting on carbon-nitrogen, putative, expressed -


Gene co-expression network
sample Sobic002G088100 Sobic002G088100 Sobic002G329700 Sobic002G329700 Sobic002G088100--Sobic002G329700 Sobic003G396800 Sobic003G396800 Sobic002G088100--Sobic003G396800 Sobic004G264700 Sobic004G264700 Sobic002G088100--Sobic004G264700 Sobic001G199800 Sobic001G199800 Sobic002G088100--Sobic001G199800 Sobic004G288100 Sobic004G288100 Sobic002G088100--Sobic004G288100 Sobic001G370500 Sobic001G370500 Sobic002G088100--Sobic001G370500 Sobic007G140600 Sobic007G140600 Sobic002G088100--Sobic007G140600 Sobic009G228600 Sobic009G228600 Sobic002G088100--Sobic009G228600 Sobic008G050700 Sobic008G050700 Sobic002G088100--Sobic008G050700 Sobic002G329700--Sobic002G088100 Sobic002G278600 Sobic002G278600 Sobic002G329700--Sobic002G278600 Sobic002G329700--Sobic003G396800 Sobic003G295700 Sobic003G295700 Sobic002G329700--Sobic003G295700 Sobic004G010700 Sobic004G010700 Sobic002G329700--Sobic004G010700 Sobic010G241600 Sobic010G241600 Sobic002G329700--Sobic010G241600 Sobic002G329700--Sobic004G288100 Sobic006G120200 Sobic006G120200 Sobic002G329700--Sobic006G120200 Sobic006G129000 Sobic006G129000 Sobic002G329700--Sobic006G129000 Sobic001G143900 Sobic001G143900 Sobic003G396800--Sobic001G143900 Sobic003G396800--Sobic009G228600 Sobic009G063800 Sobic009G063800 Sobic003G396800--Sobic009G063800 Sobic002G182000 Sobic002G182000 Sobic003G396800--Sobic002G182000 Sobic003G120700 Sobic003G120700 Sobic003G396800--Sobic003G120700 Sobic001G203600 Sobic001G203600 Sobic003G396800--Sobic001G203600 Sobic001G033600 Sobic001G033600 Sobic003G396800--Sobic001G033600 Sobic002G193500 Sobic002G193500 Sobic003G396800--Sobic002G193500 Sobic003G004800 Sobic003G004800 Sobic003G396800--Sobic003G004800 Sobic003G218400 Sobic003G218400 Sobic004G264700--Sobic003G218400 Sobic007G192700 Sobic007G192700 Sobic004G264700--Sobic007G192700 Sobic002G196350 Sobic002G196350 Sobic004G264700--Sobic002G196350 Sobic002G159500 Sobic002G159500 Sobic004G264700--Sobic002G159500 Sobic002G424350 Sobic002G424350 Sobic004G264700--Sobic002G424350 Sobic002G418400 Sobic002G418400 Sobic004G264700--Sobic002G418400 Sobic001G030300 Sobic001G030300 Sobic004G264700--Sobic001G030300 Sobic001G404800 Sobic001G404800 Sobic004G264700--Sobic001G404800 Sobic001G018500 Sobic001G018500 Sobic004G264700--Sobic001G018500 Sobic001G465300 Sobic001G465300 Sobic001G199800--Sobic001G465300 Sobic001G199800--Sobic002G088100 Sobic002G419100 Sobic002G419100 Sobic001G199800--Sobic002G419100 Sobic009G217900 Sobic009G217900 Sobic001G199800--Sobic009G217900 Sobic001G402800 Sobic001G402800 Sobic001G199800--Sobic001G402800 Sobic002G083800 Sobic002G083800 Sobic001G199800--Sobic002G083800 Sobic009G213500 Sobic009G213500 Sobic001G199800--Sobic009G213500 Sobic001G199800--Sobic002G159500 Sobic002G301300 Sobic002G301300 Sobic001G199800--Sobic002G301300 Sobic004G288100--Sobic002G083800 Sobic004G288100--Sobic002G329700 Sobic002G129200 Sobic002G129200 Sobic004G288100--Sobic002G129200 Sobic001G052900 Sobic001G052900 Sobic004G288100--Sobic001G052900 Sobic004G288100--Sobic001G370500 Sobic010G088600 Sobic010G088600 Sobic004G288100--Sobic010G088600 Sobic001G498400 Sobic001G498400 Sobic004G288100--Sobic001G498400 Sobic002G003000 Sobic002G003000 Sobic004G288100--Sobic002G003000 Sobic004G288100--Sobic002G278600 Sobic004G068200 Sobic004G068200 Sobic001G370500--Sobic004G068200 Sobic001G370500--Sobic004G288100 Sobic010G262800 Sobic010G262800 Sobic001G370500--Sobic010G262800 Sobic001G466600 Sobic001G466600 Sobic001G370500--Sobic001G466600 Sobic001G429800 Sobic001G429800 Sobic001G370500--Sobic001G429800 Sobic001G453800 Sobic001G453800 Sobic001G370500--Sobic001G453800 Sobic001G370500--Sobic002G088100 Sobic008G088812 Sobic008G088812 Sobic001G370500--Sobic008G088812 Sobic002G312800 Sobic002G312800 Sobic001G370500--Sobic002G312800 Sobic007G140600--Sobic008G050700 Sobic003G308300 Sobic003G308300 Sobic007G140600--Sobic003G308300 Sobic001G347700 Sobic001G347700 Sobic007G140600--Sobic001G347700 Sobic001G457000 Sobic001G457000 Sobic007G140600--Sobic001G457000 Sobic003G346500 Sobic003G346500 Sobic007G140600--Sobic003G346500 Sobic010G028400 Sobic010G028400 Sobic007G140600--Sobic010G028400 Sobic001G485300 Sobic001G485300 Sobic007G140600--Sobic001G485300 Sobic010G069500 Sobic010G069500 Sobic007G140600--Sobic010G069500 Sobic004G011700 Sobic004G011700 Sobic007G140600--Sobic004G011700 Sobic009G228600--Sobic003G396800 Sobic009G228600--Sobic001G143900 Sobic009G228600--Sobic009G063800 Sobic009G228600--Sobic008G050700 Sobic003G113400 Sobic003G113400 Sobic009G228600--Sobic003G113400 Sobic001G282200 Sobic001G282200 Sobic009G228600--Sobic001G282200 Sobic009G228600--Sobic002G182000 Sobic008G018300 Sobic008G018300 Sobic009G228600--Sobic008G018300 Sobic009G228600--Sobic001G203600 Sobic008G050700--Sobic007G140600 Sobic008G050700--Sobic009G063800 Sobic002G377200 Sobic002G377200 Sobic008G050700--Sobic002G377200 Sobic001G025700 Sobic001G025700 Sobic008G050700--Sobic001G025700 Sobic002G222200 Sobic002G222200 Sobic008G050700--Sobic002G222200 Sobic008G149500 Sobic008G149500 Sobic008G050700--Sobic008G149500 Sobic008G050700--Sobic010G069500 Sobic002G186500 Sobic002G186500 Sobic008G050700--Sobic002G186500 Sobic008G050700--Sobic003G308300
Octagon: transcription factors


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