Gene annotation
Transcriptome id Sobic.003G189800.1
Synonym Sb03g025410
Functional annotation expressed protein
UniProt C5XNM3
Pfam PF10258
Panther DB PTHR13135
NCBI CDD -
KEGG Orthology K14291; phosphorylated adapter RNA export protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20430 : -
RAP-DB (Rice) LOC_Os01g37842.1 : expressed protein
MaizeGDB (Corn) Zm00025a038351
Brachypodium KQK08330
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G189800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G021200 expressed protein -
2 Sobic.010G269500 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
3 Sobic.004G059100 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor, putative, expressed -
4 Sobic.001G141700 acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed K18647: acidic leucine-rich nuclear phosphoprotein 32 family member B
5 Sobic.002G140900 splicing factor, putative, expressed K12849: pre-mRNA-splicing factor 38A
6 Sobic.006G245200 OsFBX239 - F-box domain containing protein, expressed -
7 Sobic.010G042200 Rf1, mitochondrial precursor, putative, expressed -
8 Sobic.010G262900 expressed protein -
9 Sobic.001G021700 disease resistance RPP13-like protein 1, putative, expressed -
10 Sobic.002G003000 expressed protein -
11 Sobic.005G131900 inducer of CBF expression 1, putative, expressed -
12 Sobic.003G284500 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
13 Sobic.002G340350 - -
14 Sobic.001G190000 MYB family transcription factor, putative, expressed -
15 Sobic.004G076850 - -
16 Sobic.001G362800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K06940: uncharacterized protein
17 Sobic.001G465200 expressed protein -
18 Sobic.003G176900 BAH domain containing protein, expressed -
19 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
20 Sobic.007G028900 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic003G189800 Sobic003G189800 Sobic005G021200 Sobic005G021200 Sobic003G189800--Sobic005G021200 Sobic010G269500 Sobic010G269500 Sobic003G189800--Sobic010G269500 Sobic004G059100 Sobic004G059100 Sobic003G189800--Sobic004G059100 Sobic001G141700 Sobic001G141700 Sobic003G189800--Sobic001G141700 Sobic002G140900 Sobic002G140900 Sobic003G189800--Sobic002G140900 Sobic006G245200 Sobic006G245200 Sobic003G189800--Sobic006G245200 Sobic010G042200 Sobic010G042200 Sobic003G189800--Sobic010G042200 Sobic010G262900 Sobic010G262900 Sobic003G189800--Sobic010G262900 Sobic001G021700 Sobic001G021700 Sobic003G189800--Sobic001G021700 Sobic001G352600 Sobic001G352600 Sobic005G021200--Sobic001G352600 Sobic006G183600 Sobic006G183600 Sobic005G021200--Sobic006G183600 Sobic005G021200--Sobic003G189800 Sobic007G073900 Sobic007G073900 Sobic005G021200--Sobic007G073900 Sobic006G126600 Sobic006G126600 Sobic005G021200--Sobic006G126600 Sobic005G021200--Sobic004G059100 Sobic001G499200 Sobic001G499200 Sobic005G021200--Sobic001G499200 Sobic001G372900 Sobic001G372900 Sobic005G021200--Sobic001G372900 Sobic007G155400 Sobic007G155400 Sobic005G021200--Sobic007G155400 Sobic007G050400 Sobic007G050400 Sobic010G269500--Sobic007G050400 Sobic010G269500--Sobic003G189800 Sobic004G300500 Sobic004G300500 Sobic010G269500--Sobic004G300500 Sobic003G037900 Sobic003G037900 Sobic010G269500--Sobic003G037900 Sobic001G362800 Sobic001G362800 Sobic010G269500--Sobic001G362800 Sobic006G157300 Sobic006G157300 Sobic010G269500--Sobic006G157300 Sobic004G242300 Sobic004G242300 Sobic010G269500--Sobic004G242300 Sobic001G316700 Sobic001G316700 Sobic010G269500--Sobic001G316700 Sobic003G365400 Sobic003G365400 Sobic010G269500--Sobic003G365400 Sobic009G163700 Sobic009G163700 Sobic004G059100--Sobic009G163700 Sobic004G059100--Sobic010G042200 Sobic001G247000 Sobic001G247000 Sobic004G059100--Sobic001G247000 Sobic005G131900 Sobic005G131900 Sobic004G059100--Sobic005G131900 Sobic006G278800 Sobic006G278800 Sobic004G059100--Sobic006G278800 Sobic002G035500 Sobic002G035500 Sobic004G059100--Sobic002G035500 Sobic006G108000 Sobic006G108000 Sobic004G059100--Sobic006G108000 Sobic002G394200 Sobic002G394200 Sobic004G059100--Sobic002G394200 Sobic005G017100 Sobic005G017100 Sobic004G059100--Sobic005G017100 Sobic002G293400 Sobic002G293400 Sobic001G141700--Sobic002G293400 Sobic003G349000 Sobic003G349000 Sobic001G141700--Sobic003G349000 Sobic010G237800 Sobic010G237800 Sobic001G141700--Sobic010G237800 Sobic010G241600 Sobic010G241600 Sobic001G141700--Sobic010G241600 Sobic002G003000 Sobic002G003000 Sobic001G141700--Sobic002G003000 Sobic001G158300 Sobic001G158300 Sobic001G141700--Sobic001G158300 Sobic008G022200 Sobic008G022200 Sobic001G141700--Sobic008G022200 Sobic003G282700 Sobic003G282700 Sobic001G141700--Sobic003G282700 Sobic001G399600 Sobic001G399600 Sobic001G141700--Sobic001G399600 Sobic002G140900--Sobic001G247000 Sobic007G222800 Sobic007G222800 Sobic002G140900--Sobic007G222800 Sobic002G140900--Sobic003G189800 Sobic003G284500 Sobic003G284500 Sobic002G140900--Sobic003G284500 Sobic002G340350 Sobic002G340350 Sobic002G140900--Sobic002G340350 Sobic009G050100 Sobic009G050100 Sobic002G140900--Sobic009G050100 Sobic002G140900--Sobic006G157300 Sobic001G331100 Sobic001G331100 Sobic002G140900--Sobic001G331100 Sobic004G043200 Sobic004G043200 Sobic002G140900--Sobic004G043200 Sobic006G245200--Sobic006G108000 Sobic006G186200 Sobic006G186200 Sobic006G245200--Sobic006G186200 Sobic008G163800 Sobic008G163800 Sobic006G245200--Sobic008G163800 Sobic003G406500 Sobic003G406500 Sobic006G245200--Sobic003G406500 Sobic007G153300 Sobic007G153300 Sobic006G245200--Sobic007G153300 Sobic004G156600 Sobic004G156600 Sobic006G245200--Sobic004G156600 Sobic004G061600 Sobic004G061600 Sobic006G245200--Sobic004G061600 Sobic003G377200 Sobic003G377200 Sobic006G245200--Sobic003G377200 Sobic004G107400 Sobic004G107400 Sobic006G245200--Sobic004G107400 Sobic010G042200--Sobic004G059100 Sobic010G042200--Sobic005G017100 Sobic010G089300 Sobic010G089300 Sobic010G042200--Sobic010G089300 Sobic001G267500 Sobic001G267500 Sobic010G042200--Sobic001G267500 Sobic002G106100 Sobic002G106100 Sobic010G042200--Sobic002G106100 Sobic004G076850 Sobic004G076850 Sobic010G042200--Sobic004G076850 Sobic005G003900 Sobic005G003900 Sobic010G042200--Sobic005G003900 Sobic001G448100 Sobic001G448100 Sobic010G042200--Sobic001G448100 Sobic002G050500 Sobic002G050500 Sobic010G042200--Sobic002G050500 Sobic003G035500 Sobic003G035500 Sobic010G262900--Sobic003G035500 Sobic008G045800 Sobic008G045800 Sobic010G262900--Sobic008G045800 Sobic003G415100 Sobic003G415100 Sobic010G262900--Sobic003G415100 Sobic009G257500 Sobic009G257500 Sobic010G262900--Sobic009G257500 Sobic005G032400 Sobic005G032400 Sobic010G262900--Sobic005G032400 Sobic008G156200 Sobic008G156200 Sobic010G262900--Sobic008G156200 Sobic010G189100 Sobic010G189100 Sobic010G262900--Sobic010G189100 Sobic003G004500 Sobic003G004500 Sobic010G262900--Sobic003G004500 Sobic001G033400 Sobic001G033400 Sobic010G262900--Sobic001G033400 Sobic001G190000 Sobic001G190000 Sobic001G021700--Sobic001G190000 Sobic001G021700--Sobic006G157300 Sobic002G320200 Sobic002G320200 Sobic001G021700--Sobic002G320200 Sobic001G465200 Sobic001G465200 Sobic001G021700--Sobic001G465200 Sobic001G199000 Sobic001G199000 Sobic001G021700--Sobic001G199000 Sobic010G267650 Sobic010G267650 Sobic001G021700--Sobic010G267650 Sobic001G021700--Sobic008G163800 Sobic010G081200 Sobic010G081200 Sobic001G021700--Sobic010G081200 Sobic003G397000 Sobic003G397000 Sobic001G021700--Sobic003G397000
Octagon: transcription factors


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