Gene annotation
Transcriptome id Sobic.001G465200.3
Synonym
Functional annotation expressed protein
UniProt A0A1B6QPS7
Pfam PF10441
Panther DB PTHR15682
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30150 : -
RAP-DB (Rice) LOC_Os03g10600.1 : expressed protein
MaizeGDB (Corn) Zm00025a009533 , Zm00025a001152
Brachypodium -
Barley HORVU4Hr1G070090.4 , HORVU4Hr1G070090.8 , HORVU4Hr1G070090.9 , HORVU4Hr1G070090.2 , HORVU4Hr1G070090.3 , HORVU4Hr1G070090.1 , HORVU4Hr1G070090.6 , HORVU4Hr1G070090.7 , HORVU4Hr1G070090.5 , HORVU4Hr1G070090.18 , HORVU4Hr1G070090.19 , HORVU4Hr1G070090.10 , HORVU4Hr1G070090.11 , HORVU4Hr1G070090.12 , HORVU4Hr1G070090.13 , HORVU4Hr1G070090.14 , HORVU4Hr1G070090.15 , HORVU4Hr1G070090.16 , HORVU4Hr1G070090.17 , HORVU4Hr1G070090.20
Wheat TraesCS4B02G258300 , TraesCS4B02G258300 , TraesCS4B02G258300 , TraesCS4B02G258300 , TraesCS4D02G258100 , TraesCS4A02G046600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G021700 disease resistance RPP13-like protein 1, putative, expressed -
2 Sobic.009G201200 WD domain, G-beta repeat domain containing protein, expressed K14558: PWP2, periodic tryptophan protein 2
3 Sobic.006G125700 kelch repeat protein, putative, expressed -
4 Sobic.001G466200 expressed protein -
5 Sobic.003G189800 expressed protein K14291: phosphorylated adapter RNA export protein
6 Sobic.001G173800 nop14-like family protein, expressed K14766: NOP14, nucleolar protein 14
7 Sobic.001G382500 AARP2CN domain containing protein, expressed K14569: ribosome biogenesis protein BMS1
8 Sobic.009G173600 expressed protein K14572: MDN1, midasin
9 Sobic.009G237400 timeless protein, expressed K03155: timeless
10 Sobic.001G199000 HEAT repeat family protein, putative, expressed -
11 Sobic.010G269500 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
12 Sobic.009G041600 CRS1/YhbY domain containing protein, putative, expressed -
13 Sobic.010G081200 expressed protein K09142: methyltransferase
14 Sobic.003G176900 BAH domain containing protein, expressed -
15 Sobic.007G069700 gar2, putative, expressed K11294: NCL, nucleolin
16 Sobic.001G049800 DDT domain containing protein, putative, expressed -
17 Sobic.001G544300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed -
18 Sobic.005G073500 B3 DNA binding domain containing protein, expressed -
19 Sobic.009G042100 MA3 domain containing protein, expressed K17583: nucleolar MIF4G domain-containing protein 1
20 Sobic.010G042200 Rf1, mitochondrial precursor, putative, expressed -


Gene co-expression network
sample Sobic001G465200 Sobic001G465200 Sobic001G021700 Sobic001G021700 Sobic001G465200--Sobic001G021700 Sobic009G201200 Sobic009G201200 Sobic001G465200--Sobic009G201200 Sobic006G125700 Sobic006G125700 Sobic001G465200--Sobic006G125700 Sobic001G466200 Sobic001G466200 Sobic001G465200--Sobic001G466200 Sobic003G189800 Sobic003G189800 Sobic001G465200--Sobic003G189800 Sobic001G173800 Sobic001G173800 Sobic001G465200--Sobic001G173800 Sobic001G382500 Sobic001G382500 Sobic001G465200--Sobic001G382500 Sobic009G173600 Sobic009G173600 Sobic001G465200--Sobic009G173600 Sobic009G237400 Sobic009G237400 Sobic001G465200--Sobic009G237400 Sobic001G190000 Sobic001G190000 Sobic001G021700--Sobic001G190000 Sobic006G157300 Sobic006G157300 Sobic001G021700--Sobic006G157300 Sobic002G320200 Sobic002G320200 Sobic001G021700--Sobic002G320200 Sobic001G021700--Sobic001G465200 Sobic001G199000 Sobic001G199000 Sobic001G021700--Sobic001G199000 Sobic010G267650 Sobic010G267650 Sobic001G021700--Sobic010G267650 Sobic008G163800 Sobic008G163800 Sobic001G021700--Sobic008G163800 Sobic010G081200 Sobic010G081200 Sobic001G021700--Sobic010G081200 Sobic003G397000 Sobic003G397000 Sobic001G021700--Sobic003G397000 Sobic010G050400 Sobic010G050400 Sobic009G201200--Sobic010G050400 Sobic009G201200--Sobic006G125700 Sobic010G205900 Sobic010G205900 Sobic009G201200--Sobic010G205900 Sobic004G157400 Sobic004G157400 Sobic009G201200--Sobic004G157400 Sobic008G049100 Sobic008G049100 Sobic009G201200--Sobic008G049100 Sobic002G234300 Sobic002G234300 Sobic009G201200--Sobic002G234300 Sobic003G199300 Sobic003G199300 Sobic009G201200--Sobic003G199300 Sobic003G123200 Sobic003G123200 Sobic009G201200--Sobic003G123200 Sobic002G071400 Sobic002G071400 Sobic009G201200--Sobic002G071400 Sobic006G125700--Sobic001G173800 Sobic004G039900 Sobic004G039900 Sobic006G125700--Sobic004G039900 Sobic005G000300 Sobic005G000300 Sobic006G125700--Sobic005G000300 Sobic005G098800 Sobic005G098800 Sobic006G125700--Sobic005G098800 Sobic006G125700--Sobic009G201200 Sobic009G246500 Sobic009G246500 Sobic006G125700--Sobic009G246500 Sobic007G069700 Sobic007G069700 Sobic006G125700--Sobic007G069700 Sobic006G125700--Sobic003G123200 Sobic006G095400 Sobic006G095400 Sobic006G125700--Sobic006G095400 Sobic005G076301 Sobic005G076301 Sobic001G466200--Sobic005G076301 Sobic007G016000 Sobic007G016000 Sobic001G466200--Sobic007G016000 Sobic001G466200--Sobic001G465200 Sobic005G130001 Sobic005G130001 Sobic001G466200--Sobic005G130001 Sobic001G466200--Sobic001G021700 Sobic005G017100 Sobic005G017100 Sobic001G466200--Sobic005G017100 Sobic003G283750 Sobic003G283750 Sobic001G466200--Sobic003G283750 Sobic002G078850 Sobic002G078850 Sobic001G466200--Sobic002G078850 Sobic001G316700 Sobic001G316700 Sobic001G466200--Sobic001G316700 Sobic005G021200 Sobic005G021200 Sobic003G189800--Sobic005G021200 Sobic010G269500 Sobic010G269500 Sobic003G189800--Sobic010G269500 Sobic004G059100 Sobic004G059100 Sobic003G189800--Sobic004G059100 Sobic001G141700 Sobic001G141700 Sobic003G189800--Sobic001G141700 Sobic002G140900 Sobic002G140900 Sobic003G189800--Sobic002G140900 Sobic006G245200 Sobic006G245200 Sobic003G189800--Sobic006G245200 Sobic010G042200 Sobic010G042200 Sobic003G189800--Sobic010G042200 Sobic010G262900 Sobic010G262900 Sobic003G189800--Sobic010G262900 Sobic003G189800--Sobic001G021700 Sobic001G173800--Sobic001G382500 Sobic001G501400 Sobic001G501400 Sobic001G173800--Sobic001G501400 Sobic008G163500 Sobic008G163500 Sobic001G173800--Sobic008G163500 Sobic001G173800--Sobic008G049100 Sobic001G173800--Sobic009G173600 Sobic009G235200 Sobic009G235200 Sobic001G173800--Sobic009G235200 Sobic003G156500 Sobic003G156500 Sobic001G173800--Sobic003G156500 Sobic001G173800--Sobic009G246500 Sobic001G173800--Sobic005G000300 Sobic001G382500--Sobic001G173800 Sobic001G382500--Sobic009G235200 Sobic001G382500--Sobic009G173600 Sobic006G245800 Sobic006G245800 Sobic001G382500--Sobic006G245800 Sobic001G382500--Sobic001G501400 Sobic001G382500--Sobic003G156500 Sobic009G217200 Sobic009G217200 Sobic001G382500--Sobic009G217200 Sobic001G453400 Sobic001G453400 Sobic001G382500--Sobic001G453400 Sobic010G114900 Sobic010G114900 Sobic001G382500--Sobic010G114900 Sobic009G173600--Sobic002G071400 Sobic009G173600--Sobic008G049100 Sobic009G173600--Sobic001G173800 Sobic009G173600--Sobic001G382500 Sobic009G173600--Sobic010G205900 Sobic001G544300 Sobic001G544300 Sobic009G173600--Sobic001G544300 Sobic009G173600--Sobic003G123200 Sobic009G173600--Sobic003G199300 Sobic009G173600--Sobic009G246500 Sobic008G020500 Sobic008G020500 Sobic009G237400--Sobic008G020500 Sobic009G237400--Sobic010G081200 Sobic009G237400--Sobic006G245200 Sobic004G115600 Sobic004G115600 Sobic009G237400--Sobic004G115600 Sobic003G040100 Sobic003G040100 Sobic009G237400--Sobic003G040100 Sobic002G279300 Sobic002G279300 Sobic009G237400--Sobic002G279300 Sobic003G056400 Sobic003G056400 Sobic009G237400--Sobic003G056400 Sobic007G130000 Sobic007G130000 Sobic009G237400--Sobic007G130000 Sobic006G108000 Sobic006G108000 Sobic009G237400--Sobic006G108000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.