Gene annotation
Transcriptome id Sobic.010G081200.1,Sobic.010G081200.2
Synonym Sb10g007030
Functional annotation expressed protein
UniProt C5Z6G0
Pfam PF02598
Panther DB PTHR12150 PTHR12150:SF13
NCBI CDD KOG3925; Uncharacterized conserved protein
KEGG Orthology K09142; methyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19300 : -
RAP-DB (Rice) LOC_Os04g17064.1 : expressed protein
MaizeGDB (Corn) Zm00025a049590
Brachypodium KQK04441 , KQK04440 , KQK04438 , KQK04439
Barley HORVU5Hr1G113970.8 , HORVU5Hr1G113970.9 , HORVU5Hr1G113970.1 , HORVU5Hr1G113970.2 , HORVU5Hr1G113970.3 , HORVU5Hr1G113970.4 , HORVU5Hr1G113970.5 , HORVU5Hr1G113970.6 , HORVU5Hr1G113970.7 , HORVU5Hr1G113970.12 , HORVU5Hr1G113970.10 , HORVU5Hr1G113970.11
Wheat TraesCS5A02G483200 , TraesCS5B02G496300 , TraesCS5D02G496700
Populus -


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cDNA sequences
Sobic.010G081200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
2 Sobic.003G105300 - -
3 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
4 Sobic.004G354800 - -
5 Sobic.K044200 - -
6 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.003G400332 - -
8 Sobic.002G425900 expressed protein -
9 Sobic.003G109400 - -
10 Sobic.009G152901 - -
11 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
12 Sobic.002G231800 purine permease, putative, expressed -
13 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
14 Sobic.010G224800 patellin-5, putative, expressed -
15 Sobic.009G163500 - -
16 Sobic.004G239000 - -
17 Sobic.003G092200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
18 Sobic.001G261440 - -
19 Sobic.009G031300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
20 Sobic.002G284800 expressed protein -


Gene co-expression network
sample Sobic010G081200 Sobic010G081200 Sobic003G149900 Sobic003G149900 Sobic010G081200--Sobic003G149900 Sobic003G105300 Sobic003G105300 Sobic010G081200--Sobic003G105300 Sobic001G407000 Sobic001G407000 Sobic010G081200--Sobic001G407000 Sobic004G354800 Sobic004G354800 Sobic010G081200--Sobic004G354800 SobicK044200 SobicK044200 Sobic010G081200--SobicK044200 Sobic008G020300 Sobic008G020300 Sobic010G081200--Sobic008G020300 Sobic003G400332 Sobic003G400332 Sobic010G081200--Sobic003G400332 Sobic002G425900 Sobic002G425900 Sobic010G081200--Sobic002G425900 Sobic003G109400 Sobic003G109400 Sobic010G081200--Sobic003G109400 Sobic006G058300 Sobic006G058300 Sobic003G149900--Sobic006G058300 Sobic009G152901 Sobic009G152901 Sobic003G149900--Sobic009G152901 Sobic001G537900 Sobic001G537900 Sobic003G149900--Sobic001G537900 Sobic003G149900--Sobic008G020300 Sobic004G016600 Sobic004G016600 Sobic003G149900--Sobic004G016600 Sobic003G149900--Sobic004G354800 Sobic001G016900 Sobic001G016900 Sobic003G149900--Sobic001G016900 Sobic001G120100 Sobic001G120100 Sobic003G149900--Sobic001G120100 Sobic003G038300 Sobic003G038300 Sobic003G149900--Sobic003G038300 Sobic003G105300--Sobic001G407000 Sobic003G105300--Sobic008G020300 Sobic001G255700 Sobic001G255700 Sobic003G105300--Sobic001G255700 Sobic002G284800 Sobic002G284800 Sobic003G105300--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic003G105300--Sobic003G368150 Sobic009G163500 Sobic009G163500 Sobic003G105300--Sobic009G163500 Sobic004G197300 Sobic004G197300 Sobic003G105300--Sobic004G197300 Sobic003G105300--Sobic003G109400 Sobic003G105300--Sobic001G537900 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G407000--Sobic001G255700 Sobic001G541900 Sobic001G541900 Sobic001G407000--Sobic001G541900 Sobic001G407000--Sobic002G284800 Sobic001G407000--Sobic003G368150 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G407000--Sobic001G537900 Sobic004G354800--Sobic009G163500 Sobic004G354800--Sobic001G537900 Sobic004G354800--Sobic003G109400 Sobic004G354800--Sobic008G020300 Sobic003G136700 Sobic003G136700 Sobic004G354800--Sobic003G136700 Sobic004G354800--Sobic004G197300 Sobic008G131800 Sobic008G131800 Sobic004G354800--Sobic008G131800 Sobic004G354800--Sobic009G152901 Sobic004G354800--Sobic001G255700 SobicK044200--Sobic002G425900 Sobic009G154000 Sobic009G154000 SobicK044200--Sobic009G154000 Sobic004G330400 Sobic004G330400 SobicK044200--Sobic004G330400 SobicK044200--Sobic003G109400 SobicK044200--Sobic004G354800 SobicK044200--Sobic001G255700 SobicK044200--Sobic009G163500 SobicK044200--Sobic002G284800 SobicK044200--Sobic010G224800 Sobic008G020300--Sobic001G537900 Sobic008G020300--Sobic003G105300 Sobic008G020300--Sobic001G407000 Sobic008G020300--Sobic003G109400 Sobic008G020300--Sobic001G255700 Sobic008G020300--Sobic009G163500 Sobic008G020300--Sobic004G197300 Sobic008G020300--Sobic004G354800 Sobic007G001300 Sobic007G001300 Sobic008G020300--Sobic007G001300 Sobic010G155901 Sobic010G155901 Sobic003G400332--Sobic010G155901 Sobic001G139750 Sobic001G139750 Sobic003G400332--Sobic001G139750 Sobic003G400332--Sobic006G058300 Sobic002G373200 Sobic002G373200 Sobic003G400332--Sobic002G373200 Sobic005G076100 Sobic005G076100 Sobic003G400332--Sobic005G076100 Sobic003G400332--Sobic003G149900 Sobic003G400332--Sobic001G407000 Sobic010G132300 Sobic010G132300 Sobic003G400332--Sobic010G132300 Sobic003G400332--Sobic001G541900 Sobic002G425900--Sobic010G224800 Sobic002G425900--Sobic002G284800 Sobic002G425900--Sobic001G255700 Sobic002G425900--Sobic003G105300 Sobic010G114400 Sobic010G114400 Sobic002G425900--Sobic010G114400 Sobic002G425900--Sobic003G368150 Sobic008G133100 Sobic008G133100 Sobic002G425900--Sobic008G133100 Sobic002G425900--Sobic003G109400 Sobic002G425900--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic003G109400--Sobic002G156300 Sobic003G109400--Sobic010G224800 Sobic003G109400--Sobic007G001300 Sobic003G109400--Sobic010G114400 Sobic003G109400--Sobic009G163500 Sobic009G031100 Sobic009G031100 Sobic003G109400--Sobic009G031100 Sobic003G109400--Sobic008G020300 Sobic002G206200 Sobic002G206200 Sobic003G109400--Sobic002G206200 Sobic003G109400--Sobic004G197300
Octagon: transcription factors


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