Gene annotation
Transcriptome id Sobic.003G176900.1
Synonym Sb03g022870
Functional annotation BAH domain containing protein, expressed
UniProt C5XM67
Pfam PF07500 PF01426
Panther DB PTHR15141 PTHR15141:SF38
NCBI CDD KOG1886; BAH domain proteins
KEGG Orthology -
Gene Ontology GO:0006351; transcription, DNA-templated GO:0003682chromatin binding


Orthologs (automatic annotation)
TAIR AT4G11560 : bromo-adjacent homology (BAH) domain-containing protein
RAP-DB (Rice) LOC_Os01g34330.1 : BAH domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036397
Brachypodium KQK04528 , PNT70602 , KQK08182 , KQK08181 , KQK08183 , KQK04527 , PNT70603 , PNT70601 , PNT70600 , PNT70604
Barley -
Wheat TraesCS3A02G197800 , TraesCS3B02G228200 , TraesCS3A02G197800
Populus -


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cDNA sequences
Sobic.003G176900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G337300 expressed protein -
2 Sobic.009G213300 OsPOP10 - Putative Prolyl Oligopeptidase homologue, expressed -
3 Sobic.007G050400 - K12811: DDX46, ATP-dependent RNA helicase DDX46/PRP5
4 Sobic.003G408800 DEK C terminal domain containing protein, expressed K17046: protein DEK
5 Sobic.001G316700 amine oxidase, putative, expressed -
6 Sobic.002G425800 protein transport protein, putative, expressed -
7 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
8 Sobic.006G278800 expressed protein -
9 Sobic.002G285300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.001G021700 disease resistance RPP13-like protein 1, putative, expressed -
11 Sobic.010G042200 Rf1, mitochondrial precursor, putative, expressed -
12 Sobic.001G017900 FAD binding protein, putative, expressed -
13 Sobic.010G269500 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
14 Sobic.008G163700 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
15 Sobic.003G397000 expressed protein -
16 Sobic.004G059100 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor, putative, expressed -
17 Sobic.001G168000 OsFBD13 - F-box and FBD domain containing protein, expressed -
18 Sobic.006G157300 expressed protein -
19 Sobic.003G179100 protein binding protein, putative, expressed K12821: PRPF40, pre-mRNA-processing factor 40
20 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1


Gene co-expression network
sample Sobic003G176900 Sobic003G176900 Sobic002G337300 Sobic002G337300 Sobic003G176900--Sobic002G337300 Sobic009G213300 Sobic009G213300 Sobic003G176900--Sobic009G213300 Sobic007G050400 Sobic007G050400 Sobic003G176900--Sobic007G050400 Sobic003G408800 Sobic003G408800 Sobic003G176900--Sobic003G408800 Sobic001G316700 Sobic001G316700 Sobic003G176900--Sobic001G316700 Sobic002G425800 Sobic002G425800 Sobic003G176900--Sobic002G425800 Sobic009G255300 Sobic009G255300 Sobic003G176900--Sobic009G255300 Sobic006G278800 Sobic006G278800 Sobic003G176900--Sobic006G278800 Sobic002G285300 Sobic002G285300 Sobic003G176900--Sobic002G285300 Sobic001G423700 Sobic001G423700 Sobic002G337300--Sobic001G423700 Sobic007G017400 Sobic007G017400 Sobic002G337300--Sobic007G017400 Sobic002G337300--Sobic007G050400 Sobic001G237700 Sobic001G237700 Sobic002G337300--Sobic001G237700 Sobic002G337300--Sobic003G408800 Sobic002G297800 Sobic002G297800 Sobic002G337300--Sobic002G297800 Sobic007G156101 Sobic007G156101 Sobic002G337300--Sobic007G156101 Sobic002G337300--Sobic003G176900 Sobic006G204200 Sobic006G204200 Sobic002G337300--Sobic006G204200 Sobic009G213300--Sobic002G425800 Sobic001G451200 Sobic001G451200 Sobic009G213300--Sobic001G451200 Sobic008G163700 Sobic008G163700 Sobic009G213300--Sobic008G163700 Sobic007G072800 Sobic007G072800 Sobic009G213300--Sobic007G072800 Sobic009G213300--Sobic006G204200 Sobic009G213300--Sobic003G408800 Sobic003G060400 Sobic003G060400 Sobic009G213300--Sobic003G060400 Sobic001G017900 Sobic001G017900 Sobic009G213300--Sobic001G017900 Sobic007G159800 Sobic007G159800 Sobic009G213300--Sobic007G159800 Sobic007G050400--Sobic001G237700 Sobic010G269500 Sobic010G269500 Sobic007G050400--Sobic010G269500 Sobic007G050400--Sobic002G337300 Sobic007G050400--Sobic001G423700 Sobic003G037900 Sobic003G037900 Sobic007G050400--Sobic003G037900 Sobic004G134500 Sobic004G134500 Sobic007G050400--Sobic004G134500 Sobic004G327400 Sobic004G327400 Sobic007G050400--Sobic004G327400 Sobic007G013500 Sobic007G013500 Sobic007G050400--Sobic007G013500 Sobic007G050400--Sobic009G255300 Sobic003G408800--Sobic001G423700 Sobic003G408800--Sobic002G337300 Sobic003G408800--Sobic007G017400 Sobic003G408800--Sobic002G297800 Sobic003G408800--Sobic002G425800 Sobic003G408800--Sobic009G213300 Sobic003G408800--Sobic001G237700 Sobic001G056300 Sobic001G056300 Sobic003G408800--Sobic001G056300 Sobic002G049000 Sobic002G049000 Sobic003G408800--Sobic002G049000 Sobic001G316700--Sobic003G037900 Sobic006G248700 Sobic006G248700 Sobic001G316700--Sobic006G248700 Sobic001G316700--Sobic007G050400 Sobic001G316700--Sobic010G269500 Sobic005G012400 Sobic005G012400 Sobic001G316700--Sobic005G012400 Sobic003G284500 Sobic003G284500 Sobic001G316700--Sobic003G284500 Sobic002G422200 Sobic002G422200 Sobic001G316700--Sobic002G422200 Sobic001G316700--Sobic003G176900 Sobic005G076650 Sobic005G076650 Sobic001G316700--Sobic005G076650 Sobic005G195800 Sobic005G195800 Sobic002G425800--Sobic005G195800 Sobic002G425800--Sobic001G237700 Sobic005G077466 Sobic005G077466 Sobic002G425800--Sobic005G077466 Sobic002G144966 Sobic002G144966 Sobic002G425800--Sobic002G144966 Sobic002G425800--Sobic001G423700 Sobic006G262200 Sobic006G262200 Sobic002G425800--Sobic006G262200 Sobic006G210100 Sobic006G210100 Sobic002G425800--Sobic006G210100 Sobic001G111900 Sobic001G111900 Sobic002G425800--Sobic001G111900 Sobic005G110475 Sobic005G110475 Sobic002G425800--Sobic005G110475 Sobic003G179100 Sobic003G179100 Sobic009G255300--Sobic003G179100 Sobic009G255300--Sobic007G013500 Sobic006G278500 Sobic006G278500 Sobic009G255300--Sobic006G278500 Sobic010G036000 Sobic010G036000 Sobic009G255300--Sobic010G036000 Sobic009G255300--Sobic002G285300 Sobic004G072000 Sobic004G072000 Sobic009G255300--Sobic004G072000 Sobic010G073300 Sobic010G073300 Sobic009G255300--Sobic010G073300 Sobic003G440400 Sobic003G440400 Sobic009G255300--Sobic003G440400 Sobic008G139900 Sobic008G139900 Sobic009G255300--Sobic008G139900 Sobic002G229800 Sobic002G229800 Sobic006G278800--Sobic002G229800 Sobic004G155900 Sobic004G155900 Sobic006G278800--Sobic004G155900 Sobic004G059100 Sobic004G059100 Sobic006G278800--Sobic004G059100 Sobic002G306300 Sobic002G306300 Sobic006G278800--Sobic002G306300 Sobic001G474300 Sobic001G474300 Sobic006G278800--Sobic001G474300 Sobic008G145300 Sobic008G145300 Sobic006G278800--Sobic008G145300 Sobic006G108000 Sobic006G108000 Sobic006G278800--Sobic006G108000 Sobic002G348700 Sobic002G348700 Sobic006G278800--Sobic002G348700 Sobic009G254400 Sobic009G254400 Sobic006G278800--Sobic009G254400 Sobic004G284400 Sobic004G284400 Sobic002G285300--Sobic004G284400 Sobic003G397000 Sobic003G397000 Sobic002G285300--Sobic003G397000 Sobic002G285300--Sobic001G017900 Sobic006G247500 Sobic006G247500 Sobic002G285300--Sobic006G247500 Sobic009G154000 Sobic009G154000 Sobic002G285300--Sobic009G154000 Sobic002G320200 Sobic002G320200 Sobic002G285300--Sobic002G320200 Sobic002G285300--Sobic010G036000 SobicK044200 SobicK044200 Sobic002G285300--SobicK044200 Sobic006G192400 Sobic006G192400 Sobic002G285300--Sobic006G192400
Octagon: transcription factors


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