Gene annotation
Transcriptome id Sobic.009G213300.2,Sobic.009G213300.1,Sobic.009G213300.3
Synonym Sb09g026890
Functional annotation OsPOP10 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt A0A1Z5R3M6 , A0A1Z5R3K5 , A0A1Z5R4K6
Pfam PF12695
Panther DB PTHR10992 PTHR10992:SF893
NCBI CDD KOG4667; Predicted esterase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11910 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g46210.1 : OsPOP10 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a044397
Brachypodium -
Barley HORVU1Hr1G080180.3 , HORVU1Hr1G080180.1 , HORVU1Hr1G080180.8 , HORVU1Hr1G080180.9 , HORVU1Hr1G080180.12 , HORVU1Hr1G080180.13 , HORVU1Hr1G080180.15 , HORVU1Hr1G080180.16 , HORVU1Hr1G080180.19
Wheat TraesCS1D02G363900 , TraesCS1D02G363900 , TraesCS1A02G359300 , TraesCS1B02G375500
Populus -


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cDNA sequences
Sobic.009G213300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G425800 protein transport protein, putative, expressed -
2 Sobic.001G451200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
3 Sobic.008G163700 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
4 Sobic.007G072800 OsFBX275 - F-box domain containing protein, expressed -
5 Sobic.006G204200 putrescine-binding periplasmic protein-related, putative, expressed -
6 Sobic.003G408800 DEK C terminal domain containing protein, expressed K17046: protein DEK
7 Sobic.003G060400 transcription regulator, putative, expressed -
8 Sobic.001G017900 FAD binding protein, putative, expressed -
9 Sobic.007G159800 DNA binding protein, putative, expressed -
10 Sobic.001G361900 ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
11 Sobic.003G176900 BAH domain containing protein, expressed -
12 Sobic.006G073150 - -
13 Sobic.002G337300 expressed protein -
14 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
15 Sobic.001G423700 - K13171: SRRM1, serine/arginine repetitive matrix protein 1
16 Sobic.001G237700 RNA recognition motif containing protein, putative, expressed K13091: RBM39, RNA-binding protein 39
17 Sobic.007G017400 APOBEC1 complementation factor, putative, expressed K13161: heterogeneous nuclear ribonucleoprotein R
18 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
19 Sobic.002G376800 EF hand family protein, putative -
20 Sobic.009G045700 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic009G213300 Sobic009G213300 Sobic002G425800 Sobic002G425800 Sobic009G213300--Sobic002G425800 Sobic001G451200 Sobic001G451200 Sobic009G213300--Sobic001G451200 Sobic008G163700 Sobic008G163700 Sobic009G213300--Sobic008G163700 Sobic007G072800 Sobic007G072800 Sobic009G213300--Sobic007G072800 Sobic006G204200 Sobic006G204200 Sobic009G213300--Sobic006G204200 Sobic003G408800 Sobic003G408800 Sobic009G213300--Sobic003G408800 Sobic003G060400 Sobic003G060400 Sobic009G213300--Sobic003G060400 Sobic001G017900 Sobic001G017900 Sobic009G213300--Sobic001G017900 Sobic007G159800 Sobic007G159800 Sobic009G213300--Sobic007G159800 Sobic005G195800 Sobic005G195800 Sobic002G425800--Sobic005G195800 Sobic001G237700 Sobic001G237700 Sobic002G425800--Sobic001G237700 Sobic005G077466 Sobic005G077466 Sobic002G425800--Sobic005G077466 Sobic002G144966 Sobic002G144966 Sobic002G425800--Sobic002G144966 Sobic001G423700 Sobic001G423700 Sobic002G425800--Sobic001G423700 Sobic006G262200 Sobic006G262200 Sobic002G425800--Sobic006G262200 Sobic006G210100 Sobic006G210100 Sobic002G425800--Sobic006G210100 Sobic001G111900 Sobic001G111900 Sobic002G425800--Sobic001G111900 Sobic005G110475 Sobic005G110475 Sobic002G425800--Sobic005G110475 Sobic006G073150 Sobic006G073150 Sobic001G451200--Sobic006G073150 Sobic001G267266 Sobic001G267266 Sobic001G451200--Sobic001G267266 Sobic002G120200 Sobic002G120200 Sobic001G451200--Sobic002G120200 Sobic001G451200--Sobic007G072800 Sobic001G451200--Sobic009G213300 Sobic010G153532 Sobic010G153532 Sobic001G451200--Sobic010G153532 Sobic002G034400 Sobic002G034400 Sobic001G451200--Sobic002G034400 Sobic001G419900 Sobic001G419900 Sobic001G451200--Sobic001G419900 Sobic003G221300 Sobic003G221300 Sobic001G451200--Sobic003G221300 Sobic008G163700--Sobic001G017900 Sobic002G285300 Sobic002G285300 Sobic008G163700--Sobic002G285300 Sobic008G163700--Sobic007G159800 Sobic007G156101 Sobic007G156101 Sobic008G163700--Sobic007G156101 Sobic001G038500 Sobic001G038500 Sobic008G163700--Sobic001G038500 Sobic009G255300 Sobic009G255300 Sobic008G163700--Sobic009G255300 Sobic010G092100 Sobic010G092100 Sobic008G163700--Sobic010G092100 Sobic007G017400 Sobic007G017400 Sobic008G163700--Sobic007G017400 Sobic001G361900 Sobic001G361900 Sobic008G163700--Sobic001G361900 Sobic007G072800--Sobic006G073150 Sobic002G108600 Sobic002G108600 Sobic007G072800--Sobic002G108600 Sobic007G072800--Sobic003G221300 Sobic007G072800--Sobic001G451200 Sobic007G072800--Sobic003G060400 Sobic007G072800--Sobic006G204200 Sobic007G072800--Sobic009G213300 Sobic010G146200 Sobic010G146200 Sobic007G072800--Sobic010G146200 Sobic006G249000 Sobic006G249000 Sobic007G072800--Sobic006G249000 Sobic002G376800 Sobic002G376800 Sobic006G204200--Sobic002G376800 Sobic003G057800 Sobic003G057800 Sobic006G204200--Sobic003G057800 Sobic001G479500 Sobic001G479500 Sobic006G204200--Sobic001G479500 Sobic004G016500 Sobic004G016500 Sobic006G204200--Sobic004G016500 Sobic004G315800 Sobic004G315800 Sobic006G204200--Sobic004G315800 Sobic002G330400 Sobic002G330400 Sobic006G204200--Sobic002G330400 Sobic008G161401 Sobic008G161401 Sobic006G204200--Sobic008G161401 Sobic004G020401 Sobic004G020401 Sobic006G204200--Sobic004G020401 Sobic010G248200 Sobic010G248200 Sobic006G204200--Sobic010G248200 Sobic003G408800--Sobic001G423700 Sobic002G337300 Sobic002G337300 Sobic003G408800--Sobic002G337300 Sobic003G408800--Sobic007G017400 Sobic002G297800 Sobic002G297800 Sobic003G408800--Sobic002G297800 Sobic003G408800--Sobic002G425800 Sobic003G408800--Sobic009G213300 Sobic003G408800--Sobic001G237700 Sobic001G056300 Sobic001G056300 Sobic003G408800--Sobic001G056300 Sobic002G049000 Sobic002G049000 Sobic003G408800--Sobic002G049000 Sobic003G060400--Sobic006G204200 Sobic001G046600 Sobic001G046600 Sobic003G060400--Sobic001G046600 Sobic009G045700 Sobic009G045700 Sobic003G060400--Sobic009G045700 Sobic007G073400 Sobic007G073400 Sobic003G060400--Sobic007G073400 Sobic003G060400--Sobic002G297800 Sobic004G212800 Sobic004G212800 Sobic003G060400--Sobic004G212800 Sobic009G114600 Sobic009G114600 Sobic003G060400--Sobic009G114600 Sobic003G060400--Sobic003G057800 Sobic004G164600 Sobic004G164600 Sobic003G060400--Sobic004G164600 Sobic006G192400 Sobic006G192400 Sobic001G017900--Sobic006G192400 Sobic001G017900--Sobic002G285300 Sobic001G017900--Sobic008G163700 Sobic001G017900--Sobic007G156101 Sobic003G267900 Sobic003G267900 Sobic001G017900--Sobic003G267900 Sobic006G157300 Sobic006G157300 Sobic001G017900--Sobic006G157300 Sobic004G284400 Sobic004G284400 Sobic001G017900--Sobic004G284400 Sobic001G017900--Sobic009G255300 Sobic010G036000 Sobic010G036000 Sobic001G017900--Sobic010G036000 Sobic007G159800--Sobic001G038500 Sobic007G159800--Sobic002G376800 Sobic007G159800--Sobic003G057800 Sobic009G230400 Sobic009G230400 Sobic007G159800--Sobic009G230400 Sobic007G159800--Sobic006G204200 Sobic008G105500 Sobic008G105500 Sobic007G159800--Sobic008G105500 Sobic007G159800--Sobic001G056300 Sobic007G159800--Sobic008G163700 Sobic007G159800--Sobic010G092100
Octagon: transcription factors


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