Gene annotation
Transcriptome id Sobic.009G237400.6,Sobic.009G237400.7,Sobic.009G237400.11,Sobic.009G237400.4,Sobic.009G237400.5,Sobic.009G237400.9,Sobic.009G237400.8,Sobic.009G237400.10,Sobic.009G237400.2,Sobic.009G237400.3
Synonym ATIM
Functional annotation timeless protein, expressed
UniProt A0A1Z5R3T6 , A0A1Z5R4H2 , A0A1Z5R3T5 , A0A1Z5R500 , A0A1Z5R3U7 , A0A1Z5R4R4 , A0A1Z5R3U1 , A0A1Z5R3X2 , A0A1Z5R3Z9
Pfam PF05029 PF04821
Panther DB PTHR22940 PTHR22940:SF4
NCBI CDD KOG1974; DNA topoisomerase I-interacting protein
KEGG Orthology K03155; timeless
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52910 : timeless family protein
RAP-DB (Rice) LOC_Os05g11980.1 : timeless protein, expressed
MaizeGDB (Corn) Zm00025a044628
Brachypodium KQK04790
Barley HORVU1Hr1G090050.11 , HORVU1Hr1G090050.10 , HORVU1Hr1G090050.13 , HORVU1Hr1G090050.12 , HORVU1Hr1G090050.15 , HORVU1Hr1G090050.14 , HORVU1Hr1G090050.17 , HORVU1Hr1G090050.16 , HORVU1Hr1G090050.19 , HORVU1Hr1G090050.18 , HORVU1Hr1G090050.5 , HORVU1Hr1G090050.4 , HORVU1Hr1G090050.7 , HORVU1Hr1G090050.6 , HORVU1Hr1G090050.1 , HORVU1Hr1G090050.3 , HORVU1Hr1G090050.2 , HORVU1Hr1G090050.9 , HORVU1Hr1G090050.8 , HORVU1Hr1G090050.37 , HORVU1Hr1G090050.42 , HORVU1Hr1G090050.40 , HORVU1Hr1G090050.41 , HORVU1Hr1G090050.39 , HORVU1Hr1G090050.38 , HORVU1Hr1G090050.36 , HORVU1Hr1G090050.35 , HORVU1Hr1G090050.34 , HORVU1Hr1G090050.33 , HORVU1Hr1G090050.32 , HORVU1Hr1G090050.31 , HORVU1Hr1G090050.30 , HORVU1Hr1G090050.28 , HORVU1Hr1G090050.29 , HORVU1Hr1G090050.24 , HORVU1Hr1G090050.25 , HORVU1Hr1G090050.26 , HORVU1Hr1G090050.27 , HORVU1Hr1G090050.20 , HORVU1Hr1G090050.21 , HORVU1Hr1G090050.22 , HORVU1Hr1G090050.23
Wheat TraesCS1D02G416900 , TraesCS1D02G416900 , TraesCS1D02G416900 , TraesCS1D02G416900 , TraesCS1D02G416900 , TraesCS1D02G416900 , TraesCS1D02G416900 , TraesCS1B02G439600 , TraesCS1B02G439600 , TraesCS1B02G439600 , TraesCS1B02G439600 , TraesCS1B02G439600 , TraesCS1B02G439600 , TraesCS1B02G439600 , TraesCS1B02G439600 , TraesCS1B02G439600 , TraesCS1A02G409600 , TraesCS1A02G409600 , TraesCS1A02G409600 , TraesCS1A02G409600 , TraesCS1A02G409600 , TraesCS1A02G409600 , TraesCS1A02G409600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G020500 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
2 Sobic.010G081200 expressed protein K09142: methyltransferase
3 Sobic.006G245200 OsFBX239 - F-box domain containing protein, expressed -
4 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
5 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
6 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -
7 Sobic.003G056400 expressed protein -
8 Sobic.007G130000 STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
9 Sobic.006G108000 formin, putative, expressed -
10 Sobic.009G191800 single-stranded DNA-binding protein, putative, expressed -
11 Sobic.001G331100 expressed protein -
12 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
13 Sobic.006G162700 - -
14 Sobic.002G254600 expressed protein -
15 Sobic.004G227000 expressed protein -
16 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.001G008400 brevis radix, putative, expressed -
18 Sobic.002G221400 ZOS9-14 - C2H2 zinc finger protein, expressed -
19 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
20 Sobic.008G031600 expressed protein -


Gene co-expression network
sample Sobic009G237400 Sobic009G237400 Sobic008G020500 Sobic008G020500 Sobic009G237400--Sobic008G020500 Sobic010G081200 Sobic010G081200 Sobic009G237400--Sobic010G081200 Sobic006G245200 Sobic006G245200 Sobic009G237400--Sobic006G245200 Sobic004G115600 Sobic004G115600 Sobic009G237400--Sobic004G115600 Sobic003G040100 Sobic003G040100 Sobic009G237400--Sobic003G040100 Sobic002G279300 Sobic002G279300 Sobic009G237400--Sobic002G279300 Sobic003G056400 Sobic003G056400 Sobic009G237400--Sobic003G056400 Sobic007G130000 Sobic007G130000 Sobic009G237400--Sobic007G130000 Sobic006G108000 Sobic006G108000 Sobic009G237400--Sobic006G108000 Sobic004G198200 Sobic004G198200 Sobic008G020500--Sobic004G198200 Sobic008G020500--Sobic003G040100 Sobic006G155900 Sobic006G155900 Sobic008G020500--Sobic006G155900 Sobic001G494300 Sobic001G494300 Sobic008G020500--Sobic001G494300 Sobic009G190400 Sobic009G190400 Sobic008G020500--Sobic009G190400 Sobic008G020500--Sobic007G130000 Sobic001G070200 Sobic001G070200 Sobic008G020500--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic008G020500--Sobic001G331100 Sobic004G156600 Sobic004G156600 Sobic008G020500--Sobic004G156600 Sobic003G149900 Sobic003G149900 Sobic010G081200--Sobic003G149900 Sobic003G105300 Sobic003G105300 Sobic010G081200--Sobic003G105300 Sobic001G407000 Sobic001G407000 Sobic010G081200--Sobic001G407000 Sobic004G354800 Sobic004G354800 Sobic010G081200--Sobic004G354800 SobicK044200 SobicK044200 Sobic010G081200--SobicK044200 Sobic008G020300 Sobic008G020300 Sobic010G081200--Sobic008G020300 Sobic003G400332 Sobic003G400332 Sobic010G081200--Sobic003G400332 Sobic002G425900 Sobic002G425900 Sobic010G081200--Sobic002G425900 Sobic003G109400 Sobic003G109400 Sobic010G081200--Sobic003G109400 Sobic006G245200--Sobic006G108000 Sobic006G186200 Sobic006G186200 Sobic006G245200--Sobic006G186200 Sobic008G163800 Sobic008G163800 Sobic006G245200--Sobic008G163800 Sobic003G406500 Sobic003G406500 Sobic006G245200--Sobic003G406500 Sobic007G153300 Sobic007G153300 Sobic006G245200--Sobic007G153300 Sobic006G245200--Sobic004G156600 Sobic004G061600 Sobic004G061600 Sobic006G245200--Sobic004G061600 Sobic003G377200 Sobic003G377200 Sobic006G245200--Sobic003G377200 Sobic004G107400 Sobic004G107400 Sobic006G245200--Sobic004G107400 Sobic004G115600--Sobic002G279300 Sobic004G115600--Sobic001G331100 Sobic006G278400 Sobic006G278400 Sobic004G115600--Sobic006G278400 Sobic004G115600--Sobic006G108000 Sobic004G227000 Sobic004G227000 Sobic004G115600--Sobic004G227000 Sobic001G458900 Sobic001G458900 Sobic004G115600--Sobic001G458900 Sobic003G301200 Sobic003G301200 Sobic004G115600--Sobic003G301200 Sobic003G300100 Sobic003G300100 Sobic004G115600--Sobic003G300100 Sobic003G047200 Sobic003G047200 Sobic004G115600--Sobic003G047200 Sobic003G040100--Sobic009G190400 Sobic003G040100--Sobic008G020500 Sobic003G040100--Sobic006G155900 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic003G040100--Sobic001G494300 Sobic003G390300 Sobic003G390300 Sobic003G040100--Sobic003G390300 Sobic003G415500 Sobic003G415500 Sobic003G040100--Sobic003G415500 Sobic003G040100--Sobic004G061600 Sobic002G279300--Sobic004G115600 Sobic002G279300--Sobic001G458900 Sobic002G279300--Sobic001G331100 Sobic002G279300--Sobic003G047200 Sobic002G279300--Sobic003G300100 Sobic002G293800 Sobic002G293800 Sobic002G279300--Sobic002G293800 Sobic001G098900 Sobic001G098900 Sobic002G279300--Sobic001G098900 Sobic001G077200 Sobic001G077200 Sobic002G279300--Sobic001G077200 Sobic010G234800 Sobic010G234800 Sobic002G279300--Sobic010G234800 Sobic009G191800 Sobic009G191800 Sobic003G056400--Sobic009G191800 Sobic009G031700 Sobic009G031700 Sobic003G056400--Sobic009G031700 Sobic004G013500 Sobic004G013500 Sobic003G056400--Sobic004G013500 Sobic002G254600 Sobic002G254600 Sobic003G056400--Sobic002G254600 Sobic010G114500 Sobic010G114500 Sobic003G056400--Sobic010G114500 Sobic006G162700 Sobic006G162700 Sobic003G056400--Sobic006G162700 Sobic004G188201 Sobic004G188201 Sobic003G056400--Sobic004G188201 Sobic006G178700 Sobic006G178700 Sobic003G056400--Sobic006G178700 Sobic009G031100 Sobic009G031100 Sobic003G056400--Sobic009G031100 Sobic007G130000--Sobic004G198200 Sobic001G427400 Sobic001G427400 Sobic007G130000--Sobic001G427400 Sobic007G130000--Sobic008G020500 Sobic005G056800 Sobic005G056800 Sobic007G130000--Sobic005G056800 Sobic007G130000--Sobic001G494300 Sobic007G130000--Sobic006G155900 Sobic007G130000--Sobic003G040100 Sobic002G380700 Sobic002G380700 Sobic007G130000--Sobic002G380700 Sobic001G284900 Sobic001G284900 Sobic007G130000--Sobic001G284900 Sobic006G108000--Sobic003G406500 Sobic006G108000--Sobic001G331100 Sobic006G108000--Sobic004G115600 Sobic006G108000--Sobic008G163800 Sobic006G108000--Sobic006G245200 Sobic002G221400 Sobic002G221400 Sobic006G108000--Sobic002G221400 Sobic009G254400 Sobic009G254400 Sobic006G108000--Sobic009G254400 Sobic006G108000--Sobic003G040100 Sobic006G108000--Sobic007G153300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.