Gene annotation
Transcriptome id Sobic.004G076850.1
Synonym -
Functional annotation -
UniProt A0A1Z5RLK7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G077600 phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed K03861: PIGP, GPI19, phosphatidylinositol N-acetylglucosaminyltransferase subunit P
2 Sobic.002G264900 RNA recognition motif containing protein, putative, expressed -
3 Sobic.001G267500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
4 Sobic.004G270200 CPuORF20 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
5 Sobic.004G204000 B3 DNA binding domain containing protein, expressed -
6 Sobic.001G072900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
7 Sobic.005G123400 expressed protein -
8 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
9 Sobic.002G380700 expressed protein -
10 Sobic.010G042200 Rf1, mitochondrial precursor, putative, expressed -
11 Sobic.005G216800 RNA recognition motif containing protein, expressed -
12 Sobic.001G433600 - -
13 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
14 Sobic.001G487000 expressed protein -
15 Sobic.006G278900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin response factor, putative, expressed -
16 Sobic.001G154200 IQ calmodulin-binding motif domain containing protein, expressed -
17 Sobic.009G228300 50S ribosomal protein L21, chloroplast precursor, putative, expressed K02888: RP-L21, MRPL21, large subunit ribosomal protein L21
18 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
19 Sobic.004G131100 expressed protein -
20 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1


Gene co-expression network
sample Sobic004G076850 Sobic004G076850 Sobic006G077600 Sobic006G077600 Sobic004G076850--Sobic006G077600 Sobic002G264900 Sobic002G264900 Sobic004G076850--Sobic002G264900 Sobic001G267500 Sobic001G267500 Sobic004G076850--Sobic001G267500 Sobic004G270200 Sobic004G270200 Sobic004G076850--Sobic004G270200 Sobic004G204000 Sobic004G204000 Sobic004G076850--Sobic004G204000 Sobic001G072900 Sobic001G072900 Sobic004G076850--Sobic001G072900 Sobic005G123400 Sobic005G123400 Sobic004G076850--Sobic005G123400 Sobic002G313100 Sobic002G313100 Sobic004G076850--Sobic002G313100 Sobic002G380700 Sobic002G380700 Sobic004G076850--Sobic002G380700 Sobic006G077600--Sobic002G313100 Sobic006G077600--Sobic001G072900 Sobic001G487000 Sobic001G487000 Sobic006G077600--Sobic001G487000 Sobic001G541601 Sobic001G541601 Sobic006G077600--Sobic001G541601 Sobic010G196300 Sobic010G196300 Sobic006G077600--Sobic010G196300 Sobic006G077600--Sobic004G076850 Sobic003G293100 Sobic003G293100 Sobic006G077600--Sobic003G293100 Sobic008G166100 Sobic008G166100 Sobic006G077600--Sobic008G166100 Sobic009G201000 Sobic009G201000 Sobic006G077600--Sobic009G201000 Sobic002G264900--Sobic004G076850 Sobic002G264900--Sobic006G077600 Sobic002G264900--Sobic002G313100 Sobic002G030400 Sobic002G030400 Sobic002G264900--Sobic002G030400 Sobic001G051400 Sobic001G051400 Sobic002G264900--Sobic001G051400 Sobic002G264900--Sobic004G270200 Sobic010G018900 Sobic010G018900 Sobic002G264900--Sobic010G018900 Sobic006G237500 Sobic006G237500 Sobic002G264900--Sobic006G237500 Sobic002G348400 Sobic002G348400 Sobic002G264900--Sobic002G348400 Sobic001G267500--Sobic001G072900 Sobic003G377200 Sobic003G377200 Sobic001G267500--Sobic003G377200 Sobic005G017100 Sobic005G017100 Sobic001G267500--Sobic005G017100 Sobic001G267500--Sobic004G076850 Sobic009G162900 Sobic009G162900 Sobic001G267500--Sobic009G162900 Sobic005G076650 Sobic005G076650 Sobic001G267500--Sobic005G076650 Sobic001G312700 Sobic001G312700 Sobic001G267500--Sobic001G312700 Sobic001G267500--Sobic006G077600 Sobic007G208500 Sobic007G208500 Sobic001G267500--Sobic007G208500 Sobic010G237650 Sobic010G237650 Sobic004G270200--Sobic010G237650 Sobic005G216800 Sobic005G216800 Sobic004G270200--Sobic005G216800 Sobic003G402900 Sobic003G402900 Sobic004G270200--Sobic003G402900 Sobic003G397100 Sobic003G397100 Sobic004G270200--Sobic003G397100 Sobic002G147100 Sobic002G147100 Sobic004G270200--Sobic002G147100 Sobic004G270200--Sobic004G076850 Sobic004G270200--Sobic002G264900 Sobic010G073600 Sobic010G073600 Sobic004G270200--Sobic010G073600 Sobic004G270200--Sobic006G237500 Sobic004G204000--Sobic002G313100 Sobic001G076600 Sobic001G076600 Sobic004G204000--Sobic001G076600 Sobic006G119900 Sobic006G119900 Sobic004G204000--Sobic006G119900 Sobic008G085950 Sobic008G085950 Sobic004G204000--Sobic008G085950 Sobic001G308500 Sobic001G308500 Sobic004G204000--Sobic001G308500 Sobic002G151500 Sobic002G151500 Sobic004G204000--Sobic002G151500 Sobic009G054400 Sobic009G054400 Sobic004G204000--Sobic009G054400 Sobic007G105700 Sobic007G105700 Sobic004G204000--Sobic007G105700 Sobic005G060100 Sobic005G060100 Sobic004G204000--Sobic005G060100 Sobic001G072900--Sobic001G267500 Sobic001G072900--Sobic001G487000 Sobic001G072900--Sobic006G077600 Sobic002G363700 Sobic002G363700 Sobic001G072900--Sobic002G363700 Sobic001G072900--Sobic003G377200 Sobic001G072900--Sobic001G541601 Sobic001G072900--Sobic007G208500 Sobic006G278900 Sobic006G278900 Sobic001G072900--Sobic006G278900 Sobic009G228300 Sobic009G228300 Sobic001G072900--Sobic009G228300 Sobic005G123400--Sobic006G237500 Sobic010G112600 Sobic010G112600 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic001G043200 Sobic001G043200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic009G252300 Sobic009G252300 Sobic005G123400--Sobic009G252300 Sobic007G030100 Sobic007G030100 Sobic005G123400--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic002G392400 Sobic002G392400 Sobic002G313100--Sobic002G392400 Sobic006G232800 Sobic006G232800 Sobic002G313100--Sobic006G232800 Sobic002G313100--Sobic007G105700 Sobic003G004800 Sobic003G004800 Sobic002G313100--Sobic003G004800 Sobic007G086600 Sobic007G086600 Sobic002G313100--Sobic007G086600 Sobic003G293400 Sobic003G293400 Sobic002G313100--Sobic003G293400 Sobic005G087300 Sobic005G087300 Sobic002G313100--Sobic005G087300 Sobic001G280500 Sobic001G280500 Sobic002G313100--Sobic001G280500 Sobic002G313100--Sobic001G076600 Sobic007G130000 Sobic007G130000 Sobic002G380700--Sobic007G130000 Sobic001G494300 Sobic001G494300 Sobic002G380700--Sobic001G494300 Sobic001G427400 Sobic001G427400 Sobic002G380700--Sobic001G427400 Sobic004G161400 Sobic004G161400 Sobic002G380700--Sobic004G161400 Sobic004G198200 Sobic004G198200 Sobic002G380700--Sobic004G198200 Sobic002G394200 Sobic002G394200 Sobic002G380700--Sobic002G394200 Sobic006G155900 Sobic006G155900 Sobic002G380700--Sobic006G155900 Sobic004G237300 Sobic004G237300 Sobic002G380700--Sobic004G237300 Sobic002G035500 Sobic002G035500 Sobic002G380700--Sobic002G035500
Octagon: transcription factors


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