Gene annotation
Transcriptome id Sobic.001G487000.2,Sobic.001G487000.1
Synonym Sb01g045560
Functional annotation expressed protein
UniProt C5WVW3 , A0A1B6QQ79
Pfam -
Panther DB PTHR36373 PTHR36373:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52110 : -
RAP-DB (Rice) LOC_Os03g07810.1 : expressed protein
MaizeGDB (Corn) Zm00025a053319 , Zm00025a000874
Brachypodium KQK23369 , KQK23368 , KQK23370
Barley -
Wheat TraesCS4B02G289700 , TraesCS4B02G289700 , TraesCS4D02G288700 , TraesCS4D02G288700 , TraesCS4D02G288700 , TraesCS4A02G014100
Populus -


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cDNA sequences
Sobic.001G487000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G363700 expressed protein -
2 Sobic.001G541601 - -
3 Sobic.006G278900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin response factor, putative, expressed -
4 Sobic.001G072900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.006G077600 phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed K03861: PIGP, GPI19, phosphatidylinositol N-acetylglucosaminyltransferase subunit P
6 Sobic.007G208500 expressed protein -
7 Sobic.010G096500 expressed protein -
8 Sobic.003G054100 expressed protein -
9 Sobic.010G196300 CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
10 Sobic.002G031800 PLA IIIA/PLP7, putative, expressed -
11 Sobic.002G049500 LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
12 Sobic.002G030400 SWIM zinc finger family protein, putative, expressed -
13 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.008G139500 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
15 Sobic.006G264700 - -
16 Sobic.007G151500 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
17 Sobic.001G229100 exostosin family domain containing protein, expressed -
18 Sobic.003G293100 GATA zinc finger domain containing protein, expressed -
19 Sobic.010G128900 beta-galactosidase precursor, putative, expressed -
20 Sobic.004G323500 serine threonine kinase, putative, expressed -


Gene co-expression network
sample Sobic001G487000 Sobic001G487000 Sobic002G363700 Sobic002G363700 Sobic001G487000--Sobic002G363700 Sobic001G541601 Sobic001G541601 Sobic001G487000--Sobic001G541601 Sobic006G278900 Sobic006G278900 Sobic001G487000--Sobic006G278900 Sobic001G072900 Sobic001G072900 Sobic001G487000--Sobic001G072900 Sobic006G077600 Sobic006G077600 Sobic001G487000--Sobic006G077600 Sobic007G208500 Sobic007G208500 Sobic001G487000--Sobic007G208500 Sobic010G096500 Sobic010G096500 Sobic001G487000--Sobic010G096500 Sobic003G054100 Sobic003G054100 Sobic001G487000--Sobic003G054100 Sobic010G196300 Sobic010G196300 Sobic001G487000--Sobic010G196300 Sobic002G363700--Sobic001G487000 Sobic002G363700--Sobic001G541601 Sobic002G363700--Sobic006G278900 Sobic002G363700--Sobic001G072900 Sobic002G363700--Sobic007G208500 Sobic010G128900 Sobic010G128900 Sobic002G363700--Sobic010G128900 Sobic002G256500 Sobic002G256500 Sobic002G363700--Sobic002G256500 Sobic008G098098 Sobic008G098098 Sobic002G363700--Sobic008G098098 Sobic004G180600 Sobic004G180600 Sobic002G363700--Sobic004G180600 Sobic006G264700 Sobic006G264700 Sobic001G541601--Sobic006G264700 Sobic001G541601--Sobic010G096500 Sobic001G229100 Sobic001G229100 Sobic001G541601--Sobic001G229100 Sobic003G270700 Sobic003G270700 Sobic001G541601--Sobic003G270700 Sobic001G541601--Sobic010G196300 Sobic008G139500 Sobic008G139500 Sobic001G541601--Sobic008G139500 Sobic001G541601--Sobic001G487000 Sobic004G323500 Sobic004G323500 Sobic001G541601--Sobic004G323500 Sobic004G025900 Sobic004G025900 Sobic001G541601--Sobic004G025900 Sobic006G278900--Sobic001G487000 Sobic006G278900--Sobic002G363700 Sobic006G278900--Sobic001G541601 Sobic005G076650 Sobic005G076650 Sobic006G278900--Sobic005G076650 Sobic006G278900--Sobic006G077600 Sobic006G278900--Sobic008G098098 Sobic006G278900--Sobic002G256500 Sobic006G278900--Sobic007G208500 Sobic006G278900--Sobic001G072900 Sobic001G267500 Sobic001G267500 Sobic001G072900--Sobic001G267500 Sobic001G072900--Sobic001G487000 Sobic001G072900--Sobic006G077600 Sobic001G072900--Sobic002G363700 Sobic003G377200 Sobic003G377200 Sobic001G072900--Sobic003G377200 Sobic001G072900--Sobic001G541601 Sobic001G072900--Sobic007G208500 Sobic001G072900--Sobic006G278900 Sobic009G228300 Sobic009G228300 Sobic001G072900--Sobic009G228300 Sobic002G313100 Sobic002G313100 Sobic006G077600--Sobic002G313100 Sobic006G077600--Sobic001G072900 Sobic006G077600--Sobic001G487000 Sobic006G077600--Sobic001G541601 Sobic006G077600--Sobic010G196300 Sobic004G076850 Sobic004G076850 Sobic006G077600--Sobic004G076850 Sobic003G293100 Sobic003G293100 Sobic006G077600--Sobic003G293100 Sobic008G166100 Sobic008G166100 Sobic006G077600--Sobic008G166100 Sobic009G201000 Sobic009G201000 Sobic006G077600--Sobic009G201000 Sobic006G273500 Sobic006G273500 Sobic007G208500--Sobic006G273500 Sobic009G203400 Sobic009G203400 Sobic007G208500--Sobic009G203400 Sobic007G208500--Sobic004G180600 Sobic007G208500--Sobic008G098098 Sobic006G186200 Sobic006G186200 Sobic007G208500--Sobic006G186200 Sobic007G208500--Sobic002G256500 Sobic004G061600 Sobic004G061600 Sobic007G208500--Sobic004G061600 Sobic004G043200 Sobic004G043200 Sobic007G208500--Sobic004G043200 Sobic003G390300 Sobic003G390300 Sobic007G208500--Sobic003G390300 Sobic010G096500--Sobic003G270700 Sobic007G184300 Sobic007G184300 Sobic010G096500--Sobic007G184300 Sobic002G241900 Sobic002G241900 Sobic010G096500--Sobic002G241900 Sobic007G213200 Sobic007G213200 Sobic010G096500--Sobic007G213200 Sobic005G160900 Sobic005G160900 Sobic010G096500--Sobic005G160900 Sobic010G096500--Sobic001G541601 Sobic006G218100 Sobic006G218100 Sobic010G096500--Sobic006G218100 Sobic006G115800 Sobic006G115800 Sobic010G096500--Sobic006G115800 Sobic010G096500--Sobic006G264700 Sobic004G172600 Sobic004G172600 Sobic003G054100--Sobic004G172600 Sobic003G054100--Sobic001G487000 Sobic003G049800 Sobic003G049800 Sobic003G054100--Sobic003G049800 Sobic010G231700 Sobic010G231700 Sobic003G054100--Sobic010G231700 Sobic006G255800 Sobic006G255800 Sobic003G054100--Sobic006G255800 Sobic003G395500 Sobic003G395500 Sobic003G054100--Sobic003G395500 Sobic003G054100--Sobic001G072900 Sobic003G054100--Sobic009G228300 Sobic003G095200 Sobic003G095200 Sobic003G054100--Sobic003G095200 Sobic010G196300--Sobic006G264700 Sobic008G136700 Sobic008G136700 Sobic010G196300--Sobic008G136700 Sobic010G196300--Sobic004G025900 Sobic001G315000 Sobic001G315000 Sobic010G196300--Sobic001G315000 Sobic006G028600 Sobic006G028600 Sobic010G196300--Sobic006G028600 Sobic010G196300--Sobic001G229100 Sobic005G217101 Sobic005G217101 Sobic010G196300--Sobic005G217101 Sobic004G002300 Sobic004G002300 Sobic010G196300--Sobic004G002300 Sobic010G196300--Sobic006G115800
Octagon: transcription factors


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