Gene annotation
Transcriptome id Sobic.006G264700.1
Synonym YSL7, Sb06g032720
Functional annotation -
UniProt C5YAG5
Pfam PF03169
Panther DB PTHR31645 PTHR31645:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65730 : YELLOW STRIPE like 7
RAP-DB (Rice) LOC_Os04g57840.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a032072 , Zm00025a057370 , Zm00025a010614 , Zm00025a020927 , Zm00025a010381 , Zm00025a056642 , Zm00025a057367 , Zm00025a021051 , Zm00025a035062 , Zm00025a056539 , Zm00025a056537
Brachypodium KQK00558 , KQK00455 , KQK00557 , KQJ83669 , KQJ83668 , PNT61516 , KQJ85264 , KQJ83671 , KQJ83861 , KQJ83860 , PNT61582 , KQJ83865 , PNT61581
Barley HORVU2Hr1G120250.1 , HORVU2Hr1G120250.2 , HORVU2Hr1G092880.8 , HORVU2Hr1G092880.7 , HORVU2Hr1G092880.6 , HORVU2Hr1G092880.5 , HORVU2Hr1G092880.4 , HORVU2Hr1G092880.3 , HORVU2Hr1G092880.2 , HORVU2Hr1G090280.20 , HORVU2Hr1G090280.21 , HORVU2Hr1G090280.5 , HORVU6Hr1G059420.4 , HORVU6Hr1G059420.1 , HORVU6Hr1G059420.2 , HORVU6Hr1G059420.3 , HORVU6Hr1G008970.1 , HORVU2Hr1G099860.1 , HORVU2Hr1G099860.2 , HORVU2Hr1G099860.3 , HORVU6Hr1G008970.2 , HORVU6Hr1G008970.3 , HORVU2Hr1G090280.16 , HORVU2Hr1G090280.15 , HORVU2Hr1G090280.14 , HORVU2Hr1G090280.13 , HORVU2Hr1G090280.12 , HORVU2Hr1G090280.11 , HORVU2Hr1G090280.10 , HORVU2Hr1G090280.19 , HORVU2Hr1G090280.18 , HORVU3Hr1G087790.1 , HORVU3Hr1G087790.2 , HORVU3Hr1G087790.3 , HORVU2Hr1G090310.5 , HORVU2Hr1G090310.1 , HORVU2Hr1G090310.3 , HORVU2Hr1G090310.2 , HORVU2Hr1G090310.4
Wheat TraesCS3B02G382100 , TraesCS6B02G283900 , TraesCS2A02G427400 , TraesCS2A02G390800 , TraesCS6B02G283900 , TraesCS2B02G408500 , TraesCS2D02G373800 , TraesCS2D02G554800 , TraesCS3A02G349500 , TraesCS2D02G387800 , TraesCS2D02G387800 , TraesCS2A02G553300 , TraesCS6A02G220900 , TraesCS6D02G214300 , TraesCS6B02G262400 , TraesCS2B02G394500 , TraesCS3D02G343500 , TraesCS6D02G223000 , TraesCS2D02G425500 , TraesCS2B02G585300 , TraesCS2B02G394400 , TraesCS2B02G447900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G323500 serine threonine kinase, putative, expressed -
2 Sobic.006G115800 fasciclin domain containing protein, expressed -
3 Sobic.001G229100 exostosin family domain containing protein, expressed -
4 Sobic.004G025900 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
5 Sobic.001G315000 fringe-related protein, putative, expressed -
6 Sobic.005G217101 - K01051: pectinesterase
7 Sobic.006G028600 OsSub40 - Putative Subtilisin homologue, expressed -
8 Sobic.010G196300 CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
9 Sobic.001G500900 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
11 Sobic.007G221932 - -
12 Sobic.004G336401 - -
13 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
14 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
15 Sobic.008G097800 CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
17 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
18 Sobic.005G035200 - -
19 Sobic.004G024800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
20 Sobic.002G145400 octicosapeptide/Phox/Bem1p, putative, expressed -


Gene co-expression network
sample Sobic006G264700 Sobic006G264700 Sobic004G323500 Sobic004G323500 Sobic006G264700--Sobic004G323500 Sobic006G115800 Sobic006G115800 Sobic006G264700--Sobic006G115800 Sobic001G229100 Sobic001G229100 Sobic006G264700--Sobic001G229100 Sobic004G025900 Sobic004G025900 Sobic006G264700--Sobic004G025900 Sobic001G315000 Sobic001G315000 Sobic006G264700--Sobic001G315000 Sobic005G217101 Sobic005G217101 Sobic006G264700--Sobic005G217101 Sobic006G028600 Sobic006G028600 Sobic006G264700--Sobic006G028600 Sobic010G196300 Sobic010G196300 Sobic006G264700--Sobic010G196300 Sobic001G500900 Sobic001G500900 Sobic006G264700--Sobic001G500900 Sobic004G323500--Sobic006G264700 Sobic004G323500--Sobic006G115800 Sobic004G323500--Sobic001G229100 Sobic004G323500--Sobic005G217101 Sobic006G193700 Sobic006G193700 Sobic004G323500--Sobic006G193700 Sobic004G323500--Sobic004G025900 Sobic010G063700 Sobic010G063700 Sobic004G323500--Sobic010G063700 Sobic005G212900 Sobic005G212900 Sobic004G323500--Sobic005G212900 Sobic006G105500 Sobic006G105500 Sobic004G323500--Sobic006G105500 Sobic006G115800--Sobic005G217101 Sobic004G041800 Sobic004G041800 Sobic006G115800--Sobic004G041800 Sobic001G466100 Sobic001G466100 Sobic006G115800--Sobic001G466100 Sobic010G034300 Sobic010G034300 Sobic006G115800--Sobic010G034300 Sobic004G080000 Sobic004G080000 Sobic006G115800--Sobic004G080000 Sobic009G252000 Sobic009G252000 Sobic006G115800--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic006G115800--Sobic009G091000 Sobic010G254100 Sobic010G254100 Sobic006G115800--Sobic010G254100 Sobic001G036200 Sobic001G036200 Sobic006G115800--Sobic001G036200 Sobic001G229100--Sobic006G264700 Sobic001G229100--Sobic001G315000 Sobic001G229100--Sobic006G028600 Sobic003G054800 Sobic003G054800 Sobic001G229100--Sobic003G054800 Sobic004G002300 Sobic004G002300 Sobic001G229100--Sobic004G002300 Sobic003G100600 Sobic003G100600 Sobic001G229100--Sobic003G100600 Sobic001G380000 Sobic001G380000 Sobic001G229100--Sobic001G380000 Sobic001G229100--Sobic001G500900 Sobic006G018701 Sobic006G018701 Sobic001G229100--Sobic006G018701 Sobic004G025900--Sobic001G315000 Sobic004G025900--Sobic006G028600 Sobic004G025900--Sobic006G264700 Sobic004G025900--Sobic005G217101 Sobic004G025900--Sobic004G002300 Sobic004G025900--Sobic001G500900 Sobic004G025900--Sobic006G115800 Sobic001G539820 Sobic001G539820 Sobic004G025900--Sobic001G539820 Sobic010G190500 Sobic010G190500 Sobic004G025900--Sobic010G190500 Sobic001G315000--Sobic006G028600 Sobic001G315000--Sobic004G002300 Sobic006G059100 Sobic006G059100 Sobic001G315000--Sobic006G059100 Sobic001G315000--Sobic001G500900 Sobic001G135950 Sobic001G135950 Sobic001G315000--Sobic001G135950 Sobic006G215500 Sobic006G215500 Sobic001G315000--Sobic006G215500 Sobic004G071900 Sobic004G071900 Sobic001G315000--Sobic004G071900 Sobic002G125100 Sobic002G125100 Sobic001G315000--Sobic002G125100 Sobic006G022700 Sobic006G022700 Sobic001G315000--Sobic006G022700 Sobic007G221932 Sobic007G221932 Sobic005G217101--Sobic007G221932 Sobic007G080100 Sobic007G080100 Sobic005G217101--Sobic007G080100 Sobic005G217101--Sobic009G091000 Sobic008G097800 Sobic008G097800 Sobic005G217101--Sobic008G097800 Sobic005G035200 Sobic005G035200 Sobic005G217101--Sobic005G035200 Sobic008G011901 Sobic008G011901 Sobic005G217101--Sobic008G011901 Sobic004G024800 Sobic004G024800 Sobic005G217101--Sobic004G024800 Sobic005G217101--Sobic009G252000 Sobic002G145400 Sobic002G145400 Sobic005G217101--Sobic002G145400 Sobic006G028600--Sobic004G002300 Sobic006G028600--Sobic001G315000 Sobic006G028600--Sobic003G100600 Sobic006G028600--Sobic006G059100 Sobic001G024900 Sobic001G024900 Sobic006G028600--Sobic001G024900 Sobic001G306500 Sobic001G306500 Sobic006G028600--Sobic001G306500 Sobic007G222100 Sobic007G222100 Sobic006G028600--Sobic007G222100 Sobic001G288400 Sobic001G288400 Sobic006G028600--Sobic001G288400 Sobic010G051000 Sobic010G051000 Sobic006G028600--Sobic010G051000 Sobic010G196300--Sobic006G264700 Sobic008G136700 Sobic008G136700 Sobic010G196300--Sobic008G136700 Sobic010G196300--Sobic004G025900 Sobic010G196300--Sobic001G315000 Sobic010G196300--Sobic006G028600 Sobic010G196300--Sobic001G229100 Sobic010G196300--Sobic005G217101 Sobic010G196300--Sobic004G002300 Sobic010G196300--Sobic006G115800 Sobic001G511100 Sobic001G511100 Sobic001G500900--Sobic001G511100 Sobic002G304300 Sobic002G304300 Sobic001G500900--Sobic002G304300 Sobic003G114900 Sobic003G114900 Sobic001G500900--Sobic003G114900 Sobic006G270800 Sobic006G270800 Sobic001G500900--Sobic006G270800 Sobic003G197500 Sobic003G197500 Sobic001G500900--Sobic003G197500 Sobic002G427500 Sobic002G427500 Sobic001G500900--Sobic002G427500 Sobic008G043400 Sobic008G043400 Sobic001G500900--Sobic008G043400 Sobic003G009600 Sobic003G009600 Sobic001G500900--Sobic003G009600 Sobic006G127800 Sobic006G127800 Sobic001G500900--Sobic006G127800
Octagon: transcription factors


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