Gene annotation
Transcriptome id Sobic.001G315000.1
Synonym Sb01g030630
Functional annotation fringe-related protein, putative, expressed
UniProt C5WUF3
Pfam PF02434
Panther DB PTHR10811 PTHR10811:SF26
NCBI CDD KOG2246; Galactosyltransferases
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G41460 : Protein of unknown function (DUF604)
RAP-DB (Rice) LOC_Os10g39020.1 : fringe-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a001793 , Zm00025a003144
Brachypodium KQK22378 , KQK00787 , KQJ97584 , PNT78287 , PNT69237
Barley HORVU4Hr1G084520.5 , HORVU4Hr1G084520.4 , HORVU4Hr1G084520.7 , HORVU4Hr1G084520.6 , HORVU4Hr1G084520.1 , HORVU4Hr1G084520.3 , HORVU4Hr1G084520.2 , HORVU1Hr1G049710.2 , HORVU1Hr1G049710.3 , HORVU1Hr1G049710.4
Wheat TraesCS4D02G340600 , TraesCS5A02G514600 , TraesCS1D02G193700 , TraesCS4D02G210600 , TraesCS4B02G345500 , TraesCS4A02G094600 , TraesCS1B02G205200 , TraesCS1A02G183500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G028600 OsSub40 - Putative Subtilisin homologue, expressed -
2 Sobic.004G002300 START domain containing protein, expressed -
3 Sobic.006G059100 POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
4 Sobic.001G500900 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G135950 - -
6 Sobic.006G215500 OsFBX114 - F-box domain containing protein, expressed -
7 Sobic.004G071900 expressed protein -
8 Sobic.002G125100 - -
9 Sobic.006G022700 OsFBD9 - F-box and FBD domain containing protein, expressed -
10 Sobic.003G313200 expressed protein -
11 Sobic.004G099200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
12 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
13 Sobic.009G098400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
14 Sobic.001G525600 fringe-related protein, putative, expressed -
15 Sobic.010G001200 CCT/B-box zinc finger protein, putative, expressed -
16 Sobic.002G384500 expressed protein -
17 Sobic.004G187400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
18 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
19 Sobic.004G025500 - -
20 Sobic.009G102700 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1


Gene co-expression network
sample Sobic001G315000 Sobic001G315000 Sobic006G028600 Sobic006G028600 Sobic001G315000--Sobic006G028600 Sobic004G002300 Sobic004G002300 Sobic001G315000--Sobic004G002300 Sobic006G059100 Sobic006G059100 Sobic001G315000--Sobic006G059100 Sobic001G500900 Sobic001G500900 Sobic001G315000--Sobic001G500900 Sobic001G135950 Sobic001G135950 Sobic001G315000--Sobic001G135950 Sobic006G215500 Sobic006G215500 Sobic001G315000--Sobic006G215500 Sobic004G071900 Sobic004G071900 Sobic001G315000--Sobic004G071900 Sobic002G125100 Sobic002G125100 Sobic001G315000--Sobic002G125100 Sobic006G022700 Sobic006G022700 Sobic001G315000--Sobic006G022700 Sobic006G028600--Sobic004G002300 Sobic006G028600--Sobic001G315000 Sobic003G100600 Sobic003G100600 Sobic006G028600--Sobic003G100600 Sobic006G028600--Sobic006G059100 Sobic001G024900 Sobic001G024900 Sobic006G028600--Sobic001G024900 Sobic001G306500 Sobic001G306500 Sobic006G028600--Sobic001G306500 Sobic007G222100 Sobic007G222100 Sobic006G028600--Sobic007G222100 Sobic001G288400 Sobic001G288400 Sobic006G028600--Sobic001G288400 Sobic010G051000 Sobic010G051000 Sobic006G028600--Sobic010G051000 Sobic004G002300--Sobic006G028600 Sobic009G091600 Sobic009G091600 Sobic004G002300--Sobic009G091600 Sobic006G236300 Sobic006G236300 Sobic004G002300--Sobic006G236300 Sobic007G112400 Sobic007G112400 Sobic004G002300--Sobic007G112400 Sobic009G091300 Sobic009G091300 Sobic004G002300--Sobic009G091300 Sobic005G110120 Sobic005G110120 Sobic004G002300--Sobic005G110120 Sobic008G027900 Sobic008G027900 Sobic004G002300--Sobic008G027900 Sobic005G142400 Sobic005G142400 Sobic004G002300--Sobic005G142400 Sobic006G195000 Sobic006G195000 Sobic004G002300--Sobic006G195000 Sobic004G294200 Sobic004G294200 Sobic006G059100--Sobic004G294200 Sobic008G124301 Sobic008G124301 Sobic006G059100--Sobic008G124301 Sobic002G066100 Sobic002G066100 Sobic006G059100--Sobic002G066100 Sobic009G177300 Sobic009G177300 Sobic006G059100--Sobic009G177300 Sobic008G134600 Sobic008G134600 Sobic006G059100--Sobic008G134600 Sobic006G071096 Sobic006G071096 Sobic006G059100--Sobic006G071096 Sobic002G197900 Sobic002G197900 Sobic006G059100--Sobic002G197900 Sobic003G343000 Sobic003G343000 Sobic006G059100--Sobic003G343000 Sobic001G473700 Sobic001G473700 Sobic006G059100--Sobic001G473700 Sobic001G511100 Sobic001G511100 Sobic001G500900--Sobic001G511100 Sobic002G304300 Sobic002G304300 Sobic001G500900--Sobic002G304300 Sobic003G114900 Sobic003G114900 Sobic001G500900--Sobic003G114900 Sobic006G270800 Sobic006G270800 Sobic001G500900--Sobic006G270800 Sobic003G197500 Sobic003G197500 Sobic001G500900--Sobic003G197500 Sobic002G427500 Sobic002G427500 Sobic001G500900--Sobic002G427500 Sobic008G043400 Sobic008G043400 Sobic001G500900--Sobic008G043400 Sobic003G009600 Sobic003G009600 Sobic001G500900--Sobic003G009600 Sobic006G127800 Sobic006G127800 Sobic001G500900--Sobic006G127800 Sobic001G135950--Sobic004G071900 Sobic001G135950--Sobic002G125100 Sobic001G135950--Sobic006G215500 Sobic004G099200 Sobic004G099200 Sobic001G135950--Sobic004G099200 Sobic002G279900 Sobic002G279900 Sobic001G135950--Sobic002G279900 Sobic010G001200 Sobic010G001200 Sobic001G135950--Sobic010G001200 Sobic001G525600 Sobic001G525600 Sobic001G135950--Sobic001G525600 Sobic005G145400 Sobic005G145400 Sobic001G135950--Sobic005G145400 Sobic003G313200 Sobic003G313200 Sobic001G135950--Sobic003G313200 Sobic006G215500--Sobic004G071900 Sobic006G215500--Sobic001G135950 Sobic006G215500--Sobic006G022700 Sobic006G215500--Sobic002G125100 Sobic006G215500--Sobic003G313200 Sobic001G220800 Sobic001G220800 Sobic006G215500--Sobic001G220800 Sobic004G025500 Sobic004G025500 Sobic006G215500--Sobic004G025500 Sobic009G102700 Sobic009G102700 Sobic006G215500--Sobic009G102700 Sobic006G215500--Sobic004G099200 Sobic004G071900--Sobic006G215500 Sobic004G071900--Sobic001G135950 Sobic004G071900--Sobic002G125100 Sobic004G071900--Sobic004G099200 Sobic009G105100 Sobic009G105100 Sobic004G071900--Sobic009G105100 Sobic004G071900--Sobic009G102700 Sobic004G071900--Sobic003G313200 Sobic004G071900--Sobic006G022700 Sobic004G071900--Sobic002G279900 Sobic002G125100--Sobic001G135950 Sobic002G125100--Sobic004G071900 Sobic002G125100--Sobic006G215500 Sobic002G125100--Sobic004G099200 Sobic002G125100--Sobic002G279900 Sobic002G125100--Sobic009G105100 Sobic002G125100--Sobic010G001200 Sobic002G125100--Sobic001G525600 Sobic002G125100--Sobic003G313200 Sobic006G022700--Sobic006G215500 Sobic006G022700--Sobic001G220800 Sobic006G022700--Sobic004G071900 Sobic009G098400 Sobic009G098400 Sobic006G022700--Sobic009G098400 Sobic006G022700--Sobic003G313200 Sobic004G350400 Sobic004G350400 Sobic006G022700--Sobic004G350400 Sobic006G022700--Sobic002G279900 Sobic004G187400 Sobic004G187400 Sobic006G022700--Sobic004G187400 Sobic006G022700--Sobic001G135950
Octagon: transcription factors


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