Gene annotation
Transcriptome id Sobic.004G002300.1
Synonym EDR2, Sb04g000380
Functional annotation START domain containing protein, expressed
UniProt C5XRH7
Pfam PF00169 PF01852 PF07059
Panther DB PTHR12136 PTHR12136:SF64
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT4G19040 : ENHANCED DISEASE RESISTANCE 2
RAP-DB (Rice) LOC_Os02g01270.1 : START domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035094 , Zm00025a018634 , Zm00025a015360
Brachypodium PNT65658 , KQK19815 , KQK19816 , KQK19817
Barley HORVU7Hr1G117780.11 , HORVU7Hr1G117780.10 , HORVU7Hr1G117780.13 , HORVU7Hr1G117780.12 , HORVU7Hr1G008800.20 , HORVU7Hr1G008800.21 , HORVU7Hr1G008800.22 , HORVU7Hr1G008800.23 , HORVU6Hr1G002050.9 , HORVU6Hr1G002050.8 , HORVU6Hr1G002050.5 , HORVU6Hr1G002050.4 , HORVU6Hr1G002050.7 , HORVU6Hr1G002050.6 , HORVU6Hr1G002050.1 , HORVU6Hr1G002050.3 , HORVU6Hr1G002050.2 , HORVU7Hr1G008800.19 , HORVU7Hr1G008800.18 , HORVU7Hr1G008800.11 , HORVU7Hr1G008800.10 , HORVU7Hr1G008800.13 , HORVU7Hr1G008800.12 , HORVU7Hr1G008800.15 , HORVU7Hr1G008800.14 , HORVU7Hr1G008800.16 , HORVU6Hr1G002050.11 , HORVU6Hr1G002050.10 , HORVU6Hr1G002050.12 , HORVU7Hr1G117780.5 , HORVU7Hr1G117780.4 , HORVU7Hr1G117780.7 , HORVU7Hr1G117780.6 , HORVU7Hr1G117780.1 , HORVU7Hr1G117780.3 , HORVU7Hr1G117780.2 , HORVU7Hr1G117780.9 , HORVU7Hr1G117780.8 , HORVU7Hr1G008800.9 , HORVU7Hr1G008800.8 , HORVU7Hr1G008800.5 , HORVU7Hr1G008800.4 , HORVU7Hr1G008800.7 , HORVU7Hr1G008800.6 , HORVU7Hr1G008800.3 , HORVU7Hr1G008800.2
Wheat TraesCS6D02G007600 , TraesCS6D02G007600 , TraesCS7D02G045000 , TraesCS6A02G005000 , TraesCS6A02G005000 , TraesCS6B02G010400 , TraesCS6B02G010400 , TraesCS7A02G050100 , TraesCS7A02G050100 , TraesCS4A02G437200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G028600 OsSub40 - Putative Subtilisin homologue, expressed -
2 Sobic.009G091600 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
3 Sobic.006G236300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@pectinesterase, putative, expressed -
4 Sobic.007G112400 polygalacturonase, putative, expressed -
5 Sobic.009G091300 - -
6 Sobic.005G110120 - -
7 Sobic.008G027900 pollen allergen, putative, expressed -
8 Sobic.005G142400 plant protein of unknown function domain containing protein, expressed -
9 Sobic.006G195000 purine permease, putative, expressed -
10 Sobic.010G162700 reticuline oxidase-like protein precursor, putative, expressed -
11 Sobic.010G006900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.009G169500 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
13 Sobic.005G023700 pollen allergen Cyn d 23, putative, expressed -
14 Sobic.001G306200 expansin precursor, putative, expressed -
15 Sobic.002G066300 expressed protein -
16 Sobic.008G154300 flavin monooxygenase, putative, expressed -
17 Sobic.008G028000 pollen allergen, putative, expressed -
18 Sobic.006G263500 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.001G306400 expansin precursor, putative, expressed -
20 Sobic.006G159000 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed -


Gene co-expression network
sample Sobic004G002300 Sobic004G002300 Sobic006G028600 Sobic006G028600 Sobic004G002300--Sobic006G028600 Sobic009G091600 Sobic009G091600 Sobic004G002300--Sobic009G091600 Sobic006G236300 Sobic006G236300 Sobic004G002300--Sobic006G236300 Sobic007G112400 Sobic007G112400 Sobic004G002300--Sobic007G112400 Sobic009G091300 Sobic009G091300 Sobic004G002300--Sobic009G091300 Sobic005G110120 Sobic005G110120 Sobic004G002300--Sobic005G110120 Sobic008G027900 Sobic008G027900 Sobic004G002300--Sobic008G027900 Sobic005G142400 Sobic005G142400 Sobic004G002300--Sobic005G142400 Sobic006G195000 Sobic006G195000 Sobic004G002300--Sobic006G195000 Sobic006G028600--Sobic004G002300 Sobic001G315000 Sobic001G315000 Sobic006G028600--Sobic001G315000 Sobic003G100600 Sobic003G100600 Sobic006G028600--Sobic003G100600 Sobic006G059100 Sobic006G059100 Sobic006G028600--Sobic006G059100 Sobic001G024900 Sobic001G024900 Sobic006G028600--Sobic001G024900 Sobic001G306500 Sobic001G306500 Sobic006G028600--Sobic001G306500 Sobic007G222100 Sobic007G222100 Sobic006G028600--Sobic007G222100 Sobic001G288400 Sobic001G288400 Sobic006G028600--Sobic001G288400 Sobic010G051000 Sobic010G051000 Sobic006G028600--Sobic010G051000 Sobic009G091600--Sobic008G027900 Sobic004G029032 Sobic004G029032 Sobic009G091600--Sobic004G029032 Sobic005G023700 Sobic005G023700 Sobic009G091600--Sobic005G023700 Sobic003G400000 Sobic003G400000 Sobic009G091600--Sobic003G400000 Sobic010G006900 Sobic010G006900 Sobic009G091600--Sobic010G006900 Sobic008G028000 Sobic008G028000 Sobic009G091600--Sobic008G028000 Sobic006G263500 Sobic006G263500 Sobic009G091600--Sobic006G263500 Sobic002G066300 Sobic002G066300 Sobic009G091600--Sobic002G066300 Sobic009G091600--Sobic007G112400 Sobic010G162700 Sobic010G162700 Sobic006G236300--Sobic010G162700 Sobic006G236300--Sobic007G112400 Sobic006G236300--Sobic006G195000 Sobic009G169500 Sobic009G169500 Sobic006G236300--Sobic009G169500 Sobic006G236300--Sobic005G142400 Sobic001G306200 Sobic001G306200 Sobic006G236300--Sobic001G306200 Sobic006G236300--Sobic005G110120 Sobic005G204500 Sobic005G204500 Sobic006G236300--Sobic005G204500 Sobic008G154300 Sobic008G154300 Sobic006G236300--Sobic008G154300 Sobic007G112400--Sobic006G236300 Sobic007G112400--Sobic010G162700 Sobic007G112400--Sobic006G195000 Sobic007G112400--Sobic005G142400 Sobic007G112400--Sobic009G169500 Sobic007G112400--Sobic001G306200 Sobic007G112400--Sobic008G154300 Sobic007G112400--Sobic005G110120 Sobic007G112400--Sobic009G091600 Sobic009G091300--Sobic005G142400 Sobic009G091300--Sobic001G306200 Sobic009G091300--Sobic009G169500 Sobic009G091300--Sobic005G110120 Sobic009G091300--Sobic008G154300 Sobic001G269800 Sobic001G269800 Sobic009G091300--Sobic001G269800 Sobic003G394801 Sobic003G394801 Sobic009G091300--Sobic003G394801 Sobic010G091800 Sobic010G091800 Sobic009G091300--Sobic010G091800 Sobic001G306400 Sobic001G306400 Sobic009G091300--Sobic001G306400 Sobic005G110120--Sobic009G169500 Sobic005G110120--Sobic009G091300 Sobic005G110120--Sobic001G306200 Sobic005G110120--Sobic005G204500 Sobic005G110120--Sobic006G195000 Sobic005G110120--Sobic006G236300 Sobic005G110120--Sobic010G162700 Sobic005G009500 Sobic005G009500 Sobic005G110120--Sobic005G009500 Sobic005G006300 Sobic005G006300 Sobic005G110120--Sobic005G006300 Sobic008G027900--Sobic009G091600 Sobic008G027900--Sobic010G006900 Sobic008G027900--Sobic006G263500 Sobic008G027900--Sobic008G028000 Sobic008G027900--Sobic005G023700 Sobic008G027900--Sobic004G029032 Sobic005G025600 Sobic005G025600 Sobic008G027900--Sobic005G025600 Sobic008G027900--Sobic003G400000 Sobic008G027900--Sobic002G066300 Sobic005G142400--Sobic008G154300 Sobic005G142400--Sobic001G306200 Sobic005G142400--Sobic009G169500 Sobic005G142400--Sobic009G091300 Sobic005G142400--Sobic001G306400 Sobic005G142400--Sobic003G394801 Sobic005G142400--Sobic007G112400 Sobic005G142400--Sobic006G236300 Sobic005G142400--Sobic010G162700 Sobic006G195000--Sobic010G162700 Sobic006G195000--Sobic006G236300 Sobic006G195000--Sobic007G112400 Sobic006G195000--Sobic005G204500 Sobic006G195000--Sobic009G169500 Sobic006G195000--Sobic001G306200 Sobic006G195000--Sobic005G110120 Sobic006G142200 Sobic006G142200 Sobic006G195000--Sobic006G142200 Sobic006G195000--Sobic005G142400
Octagon: transcription factors


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