Gene annotation
Transcriptome id Sobic.006G059100.1
Synonym Sb06g014740, SAH7
Functional annotation POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed
UniProt C5YFA3
Pfam PF01190
Panther DB PTHR31614 PTHR31614:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08685 : Pollen Ole e 1 allergen and extensin family protein
RAP-DB (Rice) LOC_Os04g32680.1 : POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed
MaizeGDB (Corn) Zm00025a055951 , Zm00025a011658
Brachypodium KQK07004 , KQK07003
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G059100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G294200 ZOS2-13 - C2H2 zinc finger protein, expressed -
2 Sobic.008G124301 - -
3 Sobic.002G066100 - -
4 Sobic.009G177300 monocopper oxidase, putative, expressed -
5 Sobic.008G134600 - -
6 Sobic.006G071096 - -
7 Sobic.002G197900 - -
8 Sobic.003G343000 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
9 Sobic.001G473700 OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
10 Sobic.002G351500 pollen allergen Cyn d 23, putative, expressed -
11 Sobic.003G164700 C2 domain containing protein, putative, expressed -
12 Sobic.009G216400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.003G178000 pectinesterase, putative, expressed -
14 Sobic.001G037066 - -
15 Sobic.007G175800 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
16 Sobic.006G062100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
17 Sobic.010G187700 GRAM and C2 domains containing protein, putative, expressed -
18 Sobic.003G317600 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
19 Sobic.003G313200 expressed protein -
20 Sobic.009G087200 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic006G059100 Sobic006G059100 Sobic004G294200 Sobic004G294200 Sobic006G059100--Sobic004G294200 Sobic008G124301 Sobic008G124301 Sobic006G059100--Sobic008G124301 Sobic002G066100 Sobic002G066100 Sobic006G059100--Sobic002G066100 Sobic009G177300 Sobic009G177300 Sobic006G059100--Sobic009G177300 Sobic008G134600 Sobic008G134600 Sobic006G059100--Sobic008G134600 Sobic006G071096 Sobic006G071096 Sobic006G059100--Sobic006G071096 Sobic002G197900 Sobic002G197900 Sobic006G059100--Sobic002G197900 Sobic003G343000 Sobic003G343000 Sobic006G059100--Sobic003G343000 Sobic001G473700 Sobic001G473700 Sobic006G059100--Sobic001G473700 Sobic003G164700 Sobic003G164700 Sobic004G294200--Sobic003G164700 Sobic004G294200--Sobic002G197900 Sobic004G294200--Sobic002G066100 Sobic002G351500 Sobic002G351500 Sobic004G294200--Sobic002G351500 Sobic003G178000 Sobic003G178000 Sobic004G294200--Sobic003G178000 Sobic004G294200--Sobic009G177300 Sobic001G228000 Sobic001G228000 Sobic004G294200--Sobic001G228000 Sobic004G294200--Sobic008G124301 Sobic006G237700 Sobic006G237700 Sobic004G294200--Sobic006G237700 Sobic008G124301--Sobic004G294200 Sobic008G124301--Sobic008G134600 Sobic008G124301--Sobic003G164700 Sobic008G124301--Sobic002G197900 Sobic008G124301--Sobic002G066100 Sobic003G317600 Sobic003G317600 Sobic008G124301--Sobic003G317600 Sobic007G175800 Sobic007G175800 Sobic008G124301--Sobic007G175800 Sobic008G119501 Sobic008G119501 Sobic008G124301--Sobic008G119501 Sobic008G124301--Sobic006G237700 Sobic002G066100--Sobic004G294200 Sobic002G066100--Sobic009G177300 Sobic002G066100--Sobic003G164700 Sobic002G066100--Sobic008G124301 Sobic002G066100--Sobic002G351500 Sobic002G066100--Sobic002G197900 Sobic009G216400 Sobic009G216400 Sobic002G066100--Sobic009G216400 Sobic002G066100--Sobic003G178000 Sobic002G066100--Sobic006G071096 Sobic009G177300--Sobic002G351500 Sobic009G177300--Sobic009G216400 Sobic009G177300--Sobic006G071096 Sobic009G177300--Sobic004G294200 Sobic009G177300--Sobic003G178000 Sobic009G177300--Sobic002G066100 Sobic003G061700 Sobic003G061700 Sobic009G177300--Sobic003G061700 Sobic007G100800 Sobic007G100800 Sobic009G177300--Sobic007G100800 Sobic008G186900 Sobic008G186900 Sobic009G177300--Sobic008G186900 Sobic008G134600--Sobic008G124301 Sobic008G134600--Sobic003G317600 Sobic008G134600--Sobic007G175800 Sobic008G134600--Sobic004G294200 Sobic008G134600--Sobic003G164700 Sobic008G134600--Sobic002G197900 Sobic004G134000 Sobic004G134000 Sobic008G134600--Sobic004G134000 Sobic008G043300 Sobic008G043300 Sobic008G134600--Sobic008G043300 Sobic001G097000 Sobic001G097000 Sobic008G134600--Sobic001G097000 Sobic006G071096--Sobic001G473700 Sobic006G071096--Sobic009G177300 Sobic003G027300 Sobic003G027300 Sobic006G071096--Sobic003G027300 Sobic009G087200 Sobic009G087200 Sobic006G071096--Sobic009G087200 Sobic006G071096--Sobic009G216400 Sobic004G318300 Sobic004G318300 Sobic006G071096--Sobic004G318300 Sobic006G071096--Sobic002G351500 Sobic010G230200 Sobic010G230200 Sobic006G071096--Sobic010G230200 Sobic006G071096--Sobic002G066100 Sobic002G197900--Sobic003G164700 Sobic002G197900--Sobic001G228000 Sobic002G197900--Sobic004G294200 Sobic007G057600 Sobic007G057600 Sobic002G197900--Sobic007G057600 Sobic002G197900--Sobic007G175800 Sobic001G002200 Sobic001G002200 Sobic002G197900--Sobic001G002200 Sobic002G197900--Sobic006G237700 Sobic002G197900--Sobic003G178000 Sobic004G024000 Sobic004G024000 Sobic002G197900--Sobic004G024000 Sobic003G305500 Sobic003G305500 Sobic003G343000--Sobic003G305500 Sobic003G343000--Sobic008G134600 Sobic003G343000--Sobic008G124301 Sobic003G343300 Sobic003G343300 Sobic003G343000--Sobic003G343300 Sobic003G343000--Sobic006G059100 Sobic001G392650 Sobic001G392650 Sobic003G343000--Sobic001G392650 Sobic003G445600 Sobic003G445600 Sobic003G343000--Sobic003G445600 Sobic006G062100 Sobic006G062100 Sobic003G343000--Sobic006G062100 Sobic003G160600 Sobic003G160600 Sobic003G343000--Sobic003G160600 Sobic001G473700--Sobic006G071096 Sobic001G473700--Sobic009G087200 Sobic001G473700--Sobic003G027300 Sobic001G473700--Sobic009G177300 Sobic001G473700--Sobic004G318300 Sobic001G473700--Sobic009G216400 Sobic001G473700--Sobic010G230200 Sobic001G473700--Sobic002G351500 Sobic006G219700 Sobic006G219700 Sobic001G473700--Sobic006G219700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.