Gene annotation
Transcriptome id Sobic.010G096500.1,Sobic.010G096500.3
Synonym Sb10g008420, TBL27
Functional annotation expressed protein
UniProt A0A1W0VSA2 , A0A194YJ89
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016413; O-acetyltransferase activity GO:0010411xyloglucan metabolic process GO:0005794Golgi apparatus


Orthologs (automatic annotation)
TAIR AT1G70230 : TRICHOME BIREFRINGENCE-LIKE 27
RAP-DB (Rice) LOC_Os06g12850.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7A02G191800 , TraesCS7D02G192800 , TraesCS7B02G096800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
2 Sobic.007G184300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aspartic proteinase-like protein 2 precursor, putative, expressed -
3 Sobic.002G241900 GPI-anchored protein, putative, expressed -
4 Sobic.007G213200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.005G160900 DUF593 domain containing protein, expressed -
6 Sobic.001G541601 - -
7 Sobic.006G218100 expressed protein -
8 Sobic.006G115800 fasciclin domain containing protein, expressed -
9 Sobic.006G264700 - -
10 Sobic.001G229100 exostosin family domain containing protein, expressed -
11 Sobic.006G028600 OsSub40 - Putative Subtilisin homologue, expressed -
12 Sobic.006G208300 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR20 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
13 Sobic.001G315000 fringe-related protein, putative, expressed -
14 Sobic.003G122900 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
15 Sobic.008G139500 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
16 Sobic.004G025900 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
17 Sobic.010G266100 endoglucanase, putative, expressed -
18 Sobic.005G017400 ATCHX, putative, expressed -
19 Sobic.004G188201 - -
20 Sobic.004G002300 START domain containing protein, expressed -


Gene co-expression network
sample Sobic010G096500 Sobic010G096500 Sobic003G270700 Sobic003G270700 Sobic010G096500--Sobic003G270700 Sobic007G184300 Sobic007G184300 Sobic010G096500--Sobic007G184300 Sobic002G241900 Sobic002G241900 Sobic010G096500--Sobic002G241900 Sobic007G213200 Sobic007G213200 Sobic010G096500--Sobic007G213200 Sobic005G160900 Sobic005G160900 Sobic010G096500--Sobic005G160900 Sobic001G541601 Sobic001G541601 Sobic010G096500--Sobic001G541601 Sobic006G218100 Sobic006G218100 Sobic010G096500--Sobic006G218100 Sobic006G115800 Sobic006G115800 Sobic010G096500--Sobic006G115800 Sobic006G264700 Sobic006G264700 Sobic010G096500--Sobic006G264700 Sobic003G270700--Sobic010G096500 Sobic003G270700--Sobic007G184300 Sobic003G270700--Sobic002G241900 Sobic003G270700--Sobic007G213200 Sobic003G270700--Sobic006G218100 Sobic003G270700--Sobic001G541601 Sobic003G270700--Sobic005G160900 Sobic003G270700--Sobic006G115800 Sobic003G270700--Sobic006G264700 Sobic007G184300--Sobic003G270700 Sobic007G184300--Sobic010G096500 Sobic007G184300--Sobic006G218100 Sobic007G184300--Sobic002G241900 Sobic004G323500 Sobic004G323500 Sobic007G184300--Sobic004G323500 Sobic007G184300--Sobic006G115800 Sobic007G184300--Sobic006G264700 Sobic007G184300--Sobic007G213200 Sobic007G184300--Sobic005G160900 Sobic002G241900--Sobic007G213200 Sobic002G241900--Sobic005G160900 Sobic003G122900 Sobic003G122900 Sobic002G241900--Sobic003G122900 Sobic005G138900 Sobic005G138900 Sobic002G241900--Sobic005G138900 Sobic004G082000 Sobic004G082000 Sobic002G241900--Sobic004G082000 Sobic002G241900--Sobic003G270700 Sobic002G241900--Sobic010G096500 Sobic006G208300 Sobic006G208300 Sobic002G241900--Sobic006G208300 Sobic002G241900--Sobic007G184300 Sobic007G213200--Sobic002G241900 Sobic007G213200--Sobic004G082000 Sobic007G213200--Sobic005G160900 Sobic010G266100 Sobic010G266100 Sobic007G213200--Sobic010G266100 Sobic007G213200--Sobic006G218100 Sobic007G213200--Sobic005G138900 Sobic007G213200--Sobic003G270700 Sobic009G236700 Sobic009G236700 Sobic007G213200--Sobic009G236700 Sobic007G213200--Sobic010G096500 Sobic005G160900--Sobic007G213200 Sobic005G160900--Sobic002G241900 Sobic005G160900--Sobic006G218100 Sobic005G160900--Sobic010G096500 Sobic005G160900--Sobic004G082000 Sobic005G160900--Sobic003G270700 Sobic005G160900--Sobic003G122900 Sobic005G160900--Sobic005G138900 Sobic005G160900--Sobic007G184300 Sobic001G541601--Sobic006G264700 Sobic001G541601--Sobic010G096500 Sobic001G229100 Sobic001G229100 Sobic001G541601--Sobic001G229100 Sobic001G541601--Sobic003G270700 Sobic010G196300 Sobic010G196300 Sobic001G541601--Sobic010G196300 Sobic008G139500 Sobic008G139500 Sobic001G541601--Sobic008G139500 Sobic001G487000 Sobic001G487000 Sobic001G541601--Sobic001G487000 Sobic001G541601--Sobic004G323500 Sobic004G025900 Sobic004G025900 Sobic001G541601--Sobic004G025900 Sobic006G218100--Sobic007G213200 Sobic006G218100--Sobic005G160900 Sobic006G218100--Sobic007G184300 Sobic006G218100--Sobic002G241900 Sobic006G218100--Sobic003G270700 Sobic006G218100--Sobic010G096500 Sobic006G218100--Sobic005G138900 Sobic006G218100--Sobic010G266100 Sobic001G536200 Sobic001G536200 Sobic006G218100--Sobic001G536200 Sobic005G217101 Sobic005G217101 Sobic006G115800--Sobic005G217101 Sobic004G041800 Sobic004G041800 Sobic006G115800--Sobic004G041800 Sobic001G466100 Sobic001G466100 Sobic006G115800--Sobic001G466100 Sobic010G034300 Sobic010G034300 Sobic006G115800--Sobic010G034300 Sobic004G080000 Sobic004G080000 Sobic006G115800--Sobic004G080000 Sobic009G252000 Sobic009G252000 Sobic006G115800--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic006G115800--Sobic009G091000 Sobic010G254100 Sobic010G254100 Sobic006G115800--Sobic010G254100 Sobic001G036200 Sobic001G036200 Sobic006G115800--Sobic001G036200 Sobic006G264700--Sobic004G323500 Sobic006G264700--Sobic006G115800 Sobic006G264700--Sobic001G229100 Sobic006G264700--Sobic004G025900 Sobic001G315000 Sobic001G315000 Sobic006G264700--Sobic001G315000 Sobic006G264700--Sobic005G217101 Sobic006G028600 Sobic006G028600 Sobic006G264700--Sobic006G028600 Sobic006G264700--Sobic010G196300 Sobic001G500900 Sobic001G500900 Sobic006G264700--Sobic001G500900
Octagon: transcription factors


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