Gene annotation
Transcriptome id Sobic.006G218100.1
Synonym Sb06g028780
Functional annotation expressed protein
UniProt A0A1Z5RFY7
Pfam PF12274
Panther DB PTHR33120 PTHR33120:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35330 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os01g21144.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK10820 , KQK03938 , KQK03937 , KQK10736 , PNT70356
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G213200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.005G160900 DUF593 domain containing protein, expressed -
3 Sobic.007G184300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aspartic proteinase-like protein 2 precursor, putative, expressed -
4 Sobic.002G241900 GPI-anchored protein, putative, expressed -
5 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
6 Sobic.010G096500 expressed protein -
7 Sobic.005G138900 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
8 Sobic.010G266100 endoglucanase, putative, expressed -
9 Sobic.001G536200 expressed protein -
10 Sobic.004G082000 expressed protein -
11 Sobic.004G188201 - -
12 Sobic.006G115800 fasciclin domain containing protein, expressed -
13 Sobic.009G236700 DUF1645 domain containing protein, putative, expressed -
14 Sobic.002G176900 proton pump interactor, putative, expressed -
15 Sobic.001G332400 DUF1336 domain containing protein, expressed -
16 Sobic.003G122900 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
17 Sobic.003G374400 chloride channel protein, putative, expressed K05016: chloride channel 7
18 Sobic.005G017400 ATCHX, putative, expressed -
19 Sobic.009G176900 ATCHX, putative, expressed -
20 Sobic.006G264700 - -


Gene co-expression network
sample Sobic006G218100 Sobic006G218100 Sobic007G213200 Sobic007G213200 Sobic006G218100--Sobic007G213200 Sobic005G160900 Sobic005G160900 Sobic006G218100--Sobic005G160900 Sobic007G184300 Sobic007G184300 Sobic006G218100--Sobic007G184300 Sobic002G241900 Sobic002G241900 Sobic006G218100--Sobic002G241900 Sobic003G270700 Sobic003G270700 Sobic006G218100--Sobic003G270700 Sobic010G096500 Sobic010G096500 Sobic006G218100--Sobic010G096500 Sobic005G138900 Sobic005G138900 Sobic006G218100--Sobic005G138900 Sobic010G266100 Sobic010G266100 Sobic006G218100--Sobic010G266100 Sobic001G536200 Sobic001G536200 Sobic006G218100--Sobic001G536200 Sobic007G213200--Sobic002G241900 Sobic004G082000 Sobic004G082000 Sobic007G213200--Sobic004G082000 Sobic007G213200--Sobic005G160900 Sobic007G213200--Sobic010G266100 Sobic007G213200--Sobic006G218100 Sobic007G213200--Sobic005G138900 Sobic007G213200--Sobic003G270700 Sobic009G236700 Sobic009G236700 Sobic007G213200--Sobic009G236700 Sobic007G213200--Sobic010G096500 Sobic005G160900--Sobic007G213200 Sobic005G160900--Sobic002G241900 Sobic005G160900--Sobic006G218100 Sobic005G160900--Sobic010G096500 Sobic005G160900--Sobic004G082000 Sobic005G160900--Sobic003G270700 Sobic003G122900 Sobic003G122900 Sobic005G160900--Sobic003G122900 Sobic005G160900--Sobic005G138900 Sobic005G160900--Sobic007G184300 Sobic007G184300--Sobic003G270700 Sobic007G184300--Sobic010G096500 Sobic007G184300--Sobic006G218100 Sobic007G184300--Sobic002G241900 Sobic004G323500 Sobic004G323500 Sobic007G184300--Sobic004G323500 Sobic006G115800 Sobic006G115800 Sobic007G184300--Sobic006G115800 Sobic006G264700 Sobic006G264700 Sobic007G184300--Sobic006G264700 Sobic007G184300--Sobic007G213200 Sobic007G184300--Sobic005G160900 Sobic002G241900--Sobic007G213200 Sobic002G241900--Sobic005G160900 Sobic002G241900--Sobic003G122900 Sobic002G241900--Sobic005G138900 Sobic002G241900--Sobic004G082000 Sobic002G241900--Sobic003G270700 Sobic002G241900--Sobic010G096500 Sobic006G208300 Sobic006G208300 Sobic002G241900--Sobic006G208300 Sobic002G241900--Sobic007G184300 Sobic003G270700--Sobic010G096500 Sobic003G270700--Sobic007G184300 Sobic003G270700--Sobic002G241900 Sobic003G270700--Sobic007G213200 Sobic003G270700--Sobic006G218100 Sobic001G541601 Sobic001G541601 Sobic003G270700--Sobic001G541601 Sobic003G270700--Sobic005G160900 Sobic003G270700--Sobic006G115800 Sobic003G270700--Sobic006G264700 Sobic010G096500--Sobic003G270700 Sobic010G096500--Sobic007G184300 Sobic010G096500--Sobic002G241900 Sobic010G096500--Sobic007G213200 Sobic010G096500--Sobic005G160900 Sobic010G096500--Sobic001G541601 Sobic010G096500--Sobic006G218100 Sobic010G096500--Sobic006G115800 Sobic010G096500--Sobic006G264700 Sobic005G138900--Sobic004G082000 Sobic005G138900--Sobic002G241900 Sobic005G138900--Sobic007G213200 Sobic005G138900--Sobic009G236700 Sobic005G138900--Sobic006G218100 Sobic005G138900--Sobic005G160900 Sobic005G017400 Sobic005G017400 Sobic005G138900--Sobic005G017400 Sobic005G138900--Sobic003G122900 Sobic005G138900--Sobic007G184300 Sobic010G266100--Sobic007G213200 Sobic002G176900 Sobic002G176900 Sobic010G266100--Sobic002G176900 Sobic010G266100--Sobic004G082000 Sobic010G266100--Sobic006G218100 Sobic010G266100--Sobic003G270700 Sobic010G266100--Sobic009G236700 Sobic010G266100--Sobic002G241900 Sobic010G266100--Sobic010G096500 Sobic010G266100--Sobic007G184300 Sobic001G536200--Sobic006G218100 Sobic004G188201 Sobic004G188201 Sobic001G536200--Sobic004G188201 Sobic003G374400 Sobic003G374400 Sobic001G536200--Sobic003G374400 Sobic002G252700 Sobic002G252700 Sobic001G536200--Sobic002G252700 Sobic002G303900 Sobic002G303900 Sobic001G536200--Sobic002G303900 Sobic001G536200--Sobic002G176900 Sobic009G054200 Sobic009G054200 Sobic001G536200--Sobic009G054200 Sobic009G031700 Sobic009G031700 Sobic001G536200--Sobic009G031700 Sobic005G204900 Sobic005G204900 Sobic001G536200--Sobic005G204900
Octagon: transcription factors


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