Gene annotation
Transcriptome id Sobic.002G176900.1
Synonym Sb02g022570, PPI1
Functional annotation proton pump interactor, putative, expressed
UniProt C5XAJ8
Pfam -
Panther DB PTHR32219 PTHR32219:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0010155; regulation of proton transport GO:0005886plasma membrane GO:0005783endoplasmic reticulum


Orthologs (automatic annotation)
TAIR AT4G27500 : proton pump interactor 1
RAP-DB (Rice) LOC_Os09g17730.2 : proton pump interactor, putative, expressed
MaizeGDB (Corn) Zm00025a013791 , Zm00025a046612
Brachypodium -
Barley -
Wheat TraesCS5A02G186800 , TraesCS5A02G186800
Populus -


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cDNA sequences
Sobic.002G176900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G266100 endoglucanase, putative, expressed -
2 Sobic.001G251500 calmodulin-binding protein, putative, expressed -
3 Sobic.005G023100 OsFBX369 - F-box domain containing protein, expressed -
4 Sobic.003G374400 chloride channel protein, putative, expressed K05016: chloride channel 7
5 Sobic.006G218100 expressed protein -
6 Sobic.007G213200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.003G002900 - -
8 Sobic.005G138900 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
9 Sobic.001G536200 expressed protein -
10 Sobic.007G184300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aspartic proteinase-like protein 2 precursor, putative, expressed -
11 Sobic.009G236700 DUF1645 domain containing protein, putative, expressed -
12 Sobic.009G176900 ATCHX, putative, expressed -
13 Sobic.001G006500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsFBDUF19 - F-box and DUF domain containing protein, expressed -
14 Sobic.004G093000 protein kinase domain containing protein, putative, expressed -
15 Sobic.003G084800 expressed protein -
16 Sobic.004G352700 methionine adenosyltransferase regulatory beta subunit-related, putative, expressed -
17 Sobic.004G082000 expressed protein -
18 Sobic.004G188201 - -
19 Sobic.002G223000 emp24/gp25L/p24 family protein, putative, expressed -
20 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -


Gene co-expression network
sample Sobic002G176900 Sobic002G176900 Sobic010G266100 Sobic010G266100 Sobic002G176900--Sobic010G266100 Sobic001G251500 Sobic001G251500 Sobic002G176900--Sobic001G251500 Sobic005G023100 Sobic005G023100 Sobic002G176900--Sobic005G023100 Sobic003G374400 Sobic003G374400 Sobic002G176900--Sobic003G374400 Sobic006G218100 Sobic006G218100 Sobic002G176900--Sobic006G218100 Sobic007G213200 Sobic007G213200 Sobic002G176900--Sobic007G213200 Sobic003G002900 Sobic003G002900 Sobic002G176900--Sobic003G002900 Sobic005G138900 Sobic005G138900 Sobic002G176900--Sobic005G138900 Sobic001G536200 Sobic001G536200 Sobic002G176900--Sobic001G536200 Sobic010G266100--Sobic007G213200 Sobic010G266100--Sobic002G176900 Sobic004G082000 Sobic004G082000 Sobic010G266100--Sobic004G082000 Sobic010G266100--Sobic006G218100 Sobic003G270700 Sobic003G270700 Sobic010G266100--Sobic003G270700 Sobic009G236700 Sobic009G236700 Sobic010G266100--Sobic009G236700 Sobic002G241900 Sobic002G241900 Sobic010G266100--Sobic002G241900 Sobic010G096500 Sobic010G096500 Sobic010G266100--Sobic010G096500 Sobic007G184300 Sobic007G184300 Sobic010G266100--Sobic007G184300 Sobic004G352700 Sobic004G352700 Sobic001G251500--Sobic004G352700 Sobic001G251500--Sobic002G176900 Sobic010G217001 Sobic010G217001 Sobic001G251500--Sobic010G217001 Sobic009G027550 Sobic009G027550 Sobic001G251500--Sobic009G027550 Sobic001G492900 Sobic001G492900 Sobic001G251500--Sobic001G492900 Sobic002G231400 Sobic002G231400 Sobic001G251500--Sobic002G231400 Sobic004G306700 Sobic004G306700 Sobic001G251500--Sobic004G306700 Sobic001G316500 Sobic001G316500 Sobic001G251500--Sobic001G316500 Sobic002G208900 Sobic002G208900 Sobic001G251500--Sobic002G208900 Sobic005G023100--Sobic002G176900 Sobic003G074300 Sobic003G074300 Sobic005G023100--Sobic003G074300 Sobic001G057900 Sobic001G057900 Sobic005G023100--Sobic001G057900 Sobic001G156200 Sobic001G156200 Sobic005G023100--Sobic001G156200 Sobic004G093000 Sobic004G093000 Sobic005G023100--Sobic004G093000 Sobic004G234000 Sobic004G234000 Sobic005G023100--Sobic004G234000 Sobic010G039700 Sobic010G039700 Sobic005G023100--Sobic010G039700 Sobic005G023100--Sobic003G374400 Sobic004G218800 Sobic004G218800 Sobic005G023100--Sobic004G218800 Sobic002G174100 Sobic002G174100 Sobic003G374400--Sobic002G174100 Sobic007G090439 Sobic007G090439 Sobic003G374400--Sobic007G090439 Sobic002G303900 Sobic002G303900 Sobic003G374400--Sobic002G303900 Sobic003G374400--Sobic002G176900 Sobic003G374400--Sobic001G536200 Sobic003G374400--Sobic006G218100 Sobic001G003400 Sobic001G003400 Sobic003G374400--Sobic001G003400 Sobic001G332400 Sobic001G332400 Sobic003G374400--Sobic001G332400 Sobic004G323500 Sobic004G323500 Sobic003G374400--Sobic004G323500 Sobic006G218100--Sobic007G213200 Sobic005G160900 Sobic005G160900 Sobic006G218100--Sobic005G160900 Sobic006G218100--Sobic007G184300 Sobic006G218100--Sobic002G241900 Sobic006G218100--Sobic003G270700 Sobic006G218100--Sobic010G096500 Sobic006G218100--Sobic005G138900 Sobic006G218100--Sobic010G266100 Sobic006G218100--Sobic001G536200 Sobic007G213200--Sobic002G241900 Sobic007G213200--Sobic004G082000 Sobic007G213200--Sobic005G160900 Sobic007G213200--Sobic010G266100 Sobic007G213200--Sobic006G218100 Sobic007G213200--Sobic005G138900 Sobic007G213200--Sobic003G270700 Sobic007G213200--Sobic009G236700 Sobic007G213200--Sobic010G096500 Sobic001G510500 Sobic001G510500 Sobic003G002900--Sobic001G510500 Sobic008G142301 Sobic008G142301 Sobic003G002900--Sobic008G142301 Sobic003G233300 Sobic003G233300 Sobic003G002900--Sobic003G233300 Sobic003G002900--Sobic002G176900 Sobic005G083866 Sobic005G083866 Sobic003G002900--Sobic005G083866 Sobic001G311700 Sobic001G311700 Sobic003G002900--Sobic001G311700 Sobic002G331200 Sobic002G331200 Sobic003G002900--Sobic002G331200 Sobic009G031700 Sobic009G031700 Sobic003G002900--Sobic009G031700 Sobic001G345366 Sobic001G345366 Sobic003G002900--Sobic001G345366 Sobic005G138900--Sobic004G082000 Sobic005G138900--Sobic002G241900 Sobic005G138900--Sobic007G213200 Sobic005G138900--Sobic009G236700 Sobic005G138900--Sobic006G218100 Sobic005G138900--Sobic005G160900 Sobic005G017400 Sobic005G017400 Sobic005G138900--Sobic005G017400 Sobic003G122900 Sobic003G122900 Sobic005G138900--Sobic003G122900 Sobic005G138900--Sobic007G184300 Sobic001G536200--Sobic006G218100 Sobic004G188201 Sobic004G188201 Sobic001G536200--Sobic004G188201 Sobic001G536200--Sobic003G374400 Sobic002G252700 Sobic002G252700 Sobic001G536200--Sobic002G252700 Sobic001G536200--Sobic002G303900 Sobic001G536200--Sobic002G176900 Sobic009G054200 Sobic009G054200 Sobic001G536200--Sobic009G054200 Sobic001G536200--Sobic009G031700 Sobic005G204900 Sobic005G204900 Sobic001G536200--Sobic005G204900
Octagon: transcription factors


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