Gene annotation
Transcriptome id Sobic.004G093000.1
Synonym Sb04g007620
Functional annotation protein kinase domain containing protein, putative, expressed
UniProt A0A194YPQ3
Pfam PF00582 PF00069
Panther DB PTHR27003 PTHR27003:SF107
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G12000 : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
RAP-DB (Rice) LOC_Os02g12660.1 : protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a034564
Brachypodium KQJ94036
Barley HORVU3Hr1G050430.9 , HORVU3Hr1G050430.8 , HORVU3Hr1G050430.1 , HORVU3Hr1G050430.3 , HORVU3Hr1G050430.2 , HORVU3Hr1G050430.5 , HORVU3Hr1G050430.4 , HORVU3Hr1G050430.7 , HORVU3Hr1G050430.6
Wheat TraesCS3D02G211800 , TraesCS3D02G211800 , TraesCS6A02G182800 , TraesCS6D02G172000 , TraesCS3A02G208900 , TraesCS3A02G208900 , TraesCS6B02G213600 , TraesCS3B02G239200 , TraesCS3B02G239200 , TraesCS7A02G084400 , TraesCS7A02G084400 , TraesCS7A02G084400 , TraesCS7A02G084400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G124900 - -
2 Sobic.004G234000 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.009G203500 hexokinase, putative, expressed K00844: hexokinase
4 Sobic.003G074300 expressed protein -
5 Sobic.004G327900 expressed protein -
6 Sobic.002G381800 - -
7 Sobic.003G302600 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
8 Sobic.005G106700 roothairless 1, putative, expressed -
9 Sobic.005G014500 esterase, putative, expressed -
10 Sobic.003G106800 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
11 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
12 Sobic.005G160801 - -
13 Sobic.001G005400 - -
14 Sobic.004G240250 - -
15 Sobic.010G039700 pollen-specific protein, putative, expressed -
16 Sobic.007G136000 - -
17 Sobic.001G156200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G067200 expressed protein -
19 Sobic.003G418900 expressed protein -
20 Sobic.002G049500 LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic004G093000 Sobic004G093000 Sobic001G124900 Sobic001G124900 Sobic004G093000--Sobic001G124900 Sobic004G234000 Sobic004G234000 Sobic004G093000--Sobic004G234000 Sobic009G203500 Sobic009G203500 Sobic004G093000--Sobic009G203500 Sobic003G074300 Sobic003G074300 Sobic004G093000--Sobic003G074300 Sobic004G327900 Sobic004G327900 Sobic004G093000--Sobic004G327900 Sobic002G381800 Sobic002G381800 Sobic004G093000--Sobic002G381800 Sobic003G302600 Sobic003G302600 Sobic004G093000--Sobic003G302600 Sobic005G106700 Sobic005G106700 Sobic004G093000--Sobic005G106700 Sobic005G014500 Sobic005G014500 Sobic004G093000--Sobic005G014500 Sobic001G124900--Sobic004G093000 Sobic003G106800 Sobic003G106800 Sobic001G124900--Sobic003G106800 Sobic003G386350 Sobic003G386350 Sobic001G124900--Sobic003G386350 Sobic001G124900--Sobic004G234000 Sobic001G124900--Sobic005G106700 Sobic001G124900--Sobic004G327900 Sobic002G105501 Sobic002G105501 Sobic001G124900--Sobic002G105501 Sobic007G220066 Sobic007G220066 Sobic001G124900--Sobic007G220066 Sobic001G124900--Sobic005G014500 Sobic004G200100 Sobic004G200100 Sobic004G234000--Sobic004G200100 Sobic004G234000--Sobic003G074300 Sobic004G234000--Sobic004G327900 Sobic001G156200 Sobic001G156200 Sobic004G234000--Sobic001G156200 Sobic004G234000--Sobic002G381800 Sobic001G123400 Sobic001G123400 Sobic004G234000--Sobic001G123400 Sobic004G288000 Sobic004G288000 Sobic004G234000--Sobic004G288000 Sobic003G394000 Sobic003G394000 Sobic004G234000--Sobic003G394000 Sobic007G009900 Sobic007G009900 Sobic004G234000--Sobic007G009900 Sobic009G203500--Sobic003G302600 Sobic001G041300 Sobic001G041300 Sobic009G203500--Sobic001G041300 Sobic009G203500--Sobic002G381800 Sobic009G186900 Sobic009G186900 Sobic009G203500--Sobic009G186900 Sobic009G203500--Sobic004G234000 Sobic001G122766 Sobic001G122766 Sobic009G203500--Sobic001G122766 Sobic003G216400 Sobic003G216400 Sobic009G203500--Sobic003G216400 Sobic010G126300 Sobic010G126300 Sobic009G203500--Sobic010G126300 Sobic005G001200 Sobic005G001200 Sobic009G203500--Sobic005G001200 Sobic001G057900 Sobic001G057900 Sobic003G074300--Sobic001G057900 Sobic003G074300--Sobic004G234000 Sobic003G074300--Sobic001G156200 Sobic003G074300--Sobic004G200100 Sobic005G067200 Sobic005G067200 Sobic003G074300--Sobic005G067200 Sobic010G039700 Sobic010G039700 Sobic003G074300--Sobic010G039700 Sobic003G370800 Sobic003G370800 Sobic003G074300--Sobic003G370800 Sobic001G407300 Sobic001G407300 Sobic003G074300--Sobic001G407300 Sobic007G195900 Sobic007G195900 Sobic003G074300--Sobic007G195900 Sobic004G327900--Sobic005G106700 Sobic004G327900--Sobic004G234000 Sobic004G327900--Sobic001G123400 Sobic004G327900--Sobic004G200100 Sobic009G212900 Sobic009G212900 Sobic004G327900--Sobic009G212900 Sobic004G327900--Sobic003G106800 Sobic010G093200 Sobic010G093200 Sobic004G327900--Sobic010G093200 Sobic004G327900--Sobic005G014500 Sobic004G327900--Sobic007G009900 Sobic010G082300 Sobic010G082300 Sobic002G381800--Sobic010G082300 Sobic002G381800--Sobic003G302600 Sobic009G176200 Sobic009G176200 Sobic002G381800--Sobic009G176200 Sobic001G005400 Sobic001G005400 Sobic002G381800--Sobic001G005400 Sobic003G061600 Sobic003G061600 Sobic002G381800--Sobic003G061600 Sobic004G252850 Sobic004G252850 Sobic002G381800--Sobic004G252850 Sobic004G348000 Sobic004G348000 Sobic002G381800--Sobic004G348000 Sobic003G211000 Sobic003G211000 Sobic002G381800--Sobic003G211000 Sobic009G170900 Sobic009G170900 Sobic002G381800--Sobic009G170900 Sobic003G302600--Sobic003G061600 Sobic003G302600--Sobic009G186900 Sobic003G302600--Sobic002G381800 Sobic003G302600--Sobic003G216400 Sobic008G191900 Sobic008G191900 Sobic003G302600--Sobic008G191900 Sobic010G279600 Sobic010G279600 Sobic003G302600--Sobic010G279600 Sobic003G302600--Sobic010G082300 Sobic004G008500 Sobic004G008500 Sobic003G302600--Sobic004G008500 Sobic006G244100 Sobic006G244100 Sobic003G302600--Sobic006G244100 Sobic005G106700--Sobic004G327900 Sobic005G106700--Sobic010G093200 Sobic005G106700--Sobic001G123400 Sobic005G106700--Sobic005G014500 Sobic005G106700--Sobic003G106800 Sobic005G106700--Sobic009G212900 Sobic005G106700--Sobic004G234000 Sobic001G303300 Sobic001G303300 Sobic005G106700--Sobic001G303300 Sobic008G072400 Sobic008G072400 Sobic005G106700--Sobic008G072400 Sobic005G014500--Sobic005G106700 Sobic005G014500--Sobic004G327900 Sobic005G014500--Sobic010G093200 Sobic001G072400 Sobic001G072400 Sobic005G014500--Sobic001G072400 Sobic005G014500--Sobic001G303300 Sobic005G014500--Sobic004G093000 Sobic009G030501 Sobic009G030501 Sobic005G014500--Sobic009G030501 Sobic005G014500--Sobic001G124900 Sobic005G014500--Sobic004G234000
Octagon: transcription factors


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