Gene annotation
Transcriptome id Sobic.001G156200.1
Synonym Sb01g013610
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WR75
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18395 : -
RAP-DB (Rice) LOC_Os12g42170.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK13995
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G234000 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
2 Sobic.001G057900 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
3 Sobic.003G074300 expressed protein -
4 Sobic.004G355900 oligopeptide transporter, putative, expressed -
5 Sobic.002G083100 cadmium/zinc-transporting ATPase, putative, expressed K01534: Zn2+/Cd2+-exporting ATPase
6 Sobic.004G014900 csAtPR5, putative, expressed -
7 Sobic.004G255100 nitrate-induced NOI protein, putative, expressed -
8 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
9 Sobic.001G003400 heavy-metal-associated domain-containing protein, putative, expressed -
10 Sobic.010G279600 ZOS2-19 - C2H2 zinc finger protein, expressed -
11 Sobic.009G186900 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
12 Sobic.004G136400 protein phosphatase 2C, putative, expressed -
13 Sobic.001G257400 mps one binder kinase activator-like 1A, putative, expressed K06685: MOB1, MOB kinase activator 1
14 Sobic.004G338900 P21-Rho-binding domain containing protein, putative, expressed -
15 Sobic.010G126300 - -
16 Sobic.003G302600 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
17 Sobic.005G001200 - -
18 Sobic.003G287800 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
19 Sobic.008G131300 pectinesterase, putative, expressed K01051: pectinesterase
20 Sobic.010G070100 serine threonine kinase, putative, expressed -


Gene co-expression network
sample Sobic001G156200 Sobic001G156200 Sobic004G234000 Sobic004G234000 Sobic001G156200--Sobic004G234000 Sobic001G057900 Sobic001G057900 Sobic001G156200--Sobic001G057900 Sobic003G074300 Sobic003G074300 Sobic001G156200--Sobic003G074300 Sobic004G355900 Sobic004G355900 Sobic001G156200--Sobic004G355900 Sobic002G083100 Sobic002G083100 Sobic001G156200--Sobic002G083100 Sobic004G014900 Sobic004G014900 Sobic001G156200--Sobic004G014900 Sobic004G255100 Sobic004G255100 Sobic001G156200--Sobic004G255100 Sobic004G200100 Sobic004G200100 Sobic001G156200--Sobic004G200100 Sobic001G003400 Sobic001G003400 Sobic001G156200--Sobic001G003400 Sobic004G234000--Sobic004G200100 Sobic004G234000--Sobic003G074300 Sobic004G327900 Sobic004G327900 Sobic004G234000--Sobic004G327900 Sobic004G234000--Sobic001G156200 Sobic002G381800 Sobic002G381800 Sobic004G234000--Sobic002G381800 Sobic001G123400 Sobic001G123400 Sobic004G234000--Sobic001G123400 Sobic004G288000 Sobic004G288000 Sobic004G234000--Sobic004G288000 Sobic003G394000 Sobic003G394000 Sobic004G234000--Sobic003G394000 Sobic007G009900 Sobic007G009900 Sobic004G234000--Sobic007G009900 Sobic001G057900--Sobic003G074300 Sobic001G057900--Sobic001G156200 Sobic005G067200 Sobic005G067200 Sobic001G057900--Sobic005G067200 Sobic001G057900--Sobic004G200100 Sobic003G403000 Sobic003G403000 Sobic001G057900--Sobic003G403000 Sobic001G057900--Sobic004G234000 Sobic001G407300 Sobic001G407300 Sobic001G057900--Sobic001G407300 Sobic004G218200 Sobic004G218200 Sobic001G057900--Sobic004G218200 Sobic010G279600 Sobic010G279600 Sobic001G057900--Sobic010G279600 Sobic003G074300--Sobic001G057900 Sobic003G074300--Sobic004G234000 Sobic003G074300--Sobic001G156200 Sobic003G074300--Sobic004G200100 Sobic003G074300--Sobic005G067200 Sobic010G039700 Sobic010G039700 Sobic003G074300--Sobic010G039700 Sobic003G370800 Sobic003G370800 Sobic003G074300--Sobic003G370800 Sobic003G074300--Sobic001G407300 Sobic007G195900 Sobic007G195900 Sobic003G074300--Sobic007G195900 Sobic004G136400 Sobic004G136400 Sobic004G355900--Sobic004G136400 Sobic008G180600 Sobic008G180600 Sobic004G355900--Sobic008G180600 Sobic004G355900--Sobic004G014900 Sobic007G057201 Sobic007G057201 Sobic004G355900--Sobic007G057201 Sobic009G049701 Sobic009G049701 Sobic004G355900--Sobic009G049701 Sobic002G255800 Sobic002G255800 Sobic004G355900--Sobic002G255800 Sobic004G355900--Sobic004G255100 Sobic003G254200 Sobic003G254200 Sobic004G355900--Sobic003G254200 Sobic005G077600 Sobic005G077600 Sobic004G355900--Sobic005G077600 Sobic004G338900 Sobic004G338900 Sobic002G083100--Sobic004G338900 Sobic002G160200 Sobic002G160200 Sobic002G083100--Sobic002G160200 Sobic007G204800 Sobic007G204800 Sobic002G083100--Sobic007G204800 Sobic002G102600 Sobic002G102600 Sobic002G083100--Sobic002G102600 Sobic005G001200 Sobic005G001200 Sobic002G083100--Sobic005G001200 Sobic006G099200 Sobic006G099200 Sobic002G083100--Sobic006G099200 Sobic001G160900 Sobic001G160900 Sobic002G083100--Sobic001G160900 Sobic005G027250 Sobic005G027250 Sobic002G083100--Sobic005G027250 Sobic003G287800 Sobic003G287800 Sobic002G083100--Sobic003G287800 Sobic004G014900--Sobic001G003400 Sobic004G014900--Sobic003G254200 Sobic004G014900--Sobic004G136400 Sobic004G048900 Sobic004G048900 Sobic004G014900--Sobic004G048900 Sobic010G074000 Sobic010G074000 Sobic004G014900--Sobic010G074000 Sobic004G014900--Sobic004G288000 Sobic004G014900--Sobic004G255100 Sobic010G187800 Sobic010G187800 Sobic004G014900--Sobic010G187800 Sobic001G103500 Sobic001G103500 Sobic004G014900--Sobic001G103500 Sobic004G255100--Sobic003G254200 Sobic004G255100--Sobic001G003400 Sobic009G249400 Sobic009G249400 Sobic004G255100--Sobic009G249400 Sobic004G255100--Sobic010G074000 Sobic004G255100--Sobic004G048900 Sobic010G261900 Sobic010G261900 Sobic004G255100--Sobic010G261900 Sobic004G031900 Sobic004G031900 Sobic004G255100--Sobic004G031900 Sobic004G255100--Sobic010G187800 Sobic004G255100--Sobic004G136400 Sobic004G200100--Sobic003G394000 Sobic009G170900 Sobic009G170900 Sobic004G200100--Sobic009G170900 Sobic007G136000 Sobic007G136000 Sobic004G200100--Sobic007G136000 Sobic004G200100--Sobic004G234000 Sobic004G200100--Sobic002G381800 Sobic005G160801 Sobic005G160801 Sobic004G200100--Sobic005G160801 Sobic010G082300 Sobic010G082300 Sobic004G200100--Sobic010G082300 Sobic004G060400 Sobic004G060400 Sobic004G200100--Sobic004G060400 Sobic004G348000 Sobic004G348000 Sobic004G200100--Sobic004G348000 Sobic001G003400--Sobic004G255100 Sobic001G003400--Sobic004G014900 Sobic001G003400--Sobic010G261900 Sobic004G334900 Sobic004G334900 Sobic001G003400--Sobic004G334900 Sobic004G123100 Sobic004G123100 Sobic001G003400--Sobic004G123100 Sobic010G063700 Sobic010G063700 Sobic001G003400--Sobic010G063700 Sobic001G513400 Sobic001G513400 Sobic001G003400--Sobic001G513400 Sobic001G003400--Sobic004G031900 Sobic001G003400--Sobic010G187800
Octagon: transcription factors


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