Gene annotation
Transcriptome id Sobic.004G234000.1
Synonym BST1, DER4, MRH3
Functional annotation endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt A0A194YR81
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF106
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65090 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os02g51600.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022119 , Zm00025a033174
Brachypodium KQK18912 , PNT69623 , PNT69622 , PNT77776 , PNT76182 , KQK22666
Barley HORVU6Hr1G075060.13 , HORVU6Hr1G075060.25 , HORVU6Hr1G075060.24 , HORVU6Hr1G075060.27 , HORVU6Hr1G075060.26 , HORVU6Hr1G075060.30
Wheat TraesCS6D02G281800 , TraesCS7D02G183100 , TraesCS7B02G086400 , TraesCS7B02G086400 , TraesCS7A02G181500 , TraesCS6A02G302300 , TraesCS6B02G331500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
2 Sobic.003G074300 expressed protein -
3 Sobic.004G327900 expressed protein -
4 Sobic.001G156200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G381800 - -
6 Sobic.001G123400 expressed protein -
7 Sobic.004G288000 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.003G394000 - -
9 Sobic.007G009900 - -
10 Sobic.004G060400 ANTH/ENTH domain containing protein, putative, expressed -
11 Sobic.003G302600 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
12 Sobic.001G005400 - -
13 Sobic.005G106700 roothairless 1, putative, expressed -
14 Sobic.010G082300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
15 Sobic.004G093000 protein kinase domain containing protein, putative, expressed -
16 Sobic.001G057900 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
17 Sobic.005G160801 - -
18 Sobic.009G203500 hexokinase, putative, expressed K00844: hexokinase
19 Sobic.009G170900 ATCHX15, putative, expressed -
20 Sobic.004G252850 - -


Gene co-expression network
sample Sobic004G234000 Sobic004G234000 Sobic004G200100 Sobic004G200100 Sobic004G234000--Sobic004G200100 Sobic003G074300 Sobic003G074300 Sobic004G234000--Sobic003G074300 Sobic004G327900 Sobic004G327900 Sobic004G234000--Sobic004G327900 Sobic001G156200 Sobic001G156200 Sobic004G234000--Sobic001G156200 Sobic002G381800 Sobic002G381800 Sobic004G234000--Sobic002G381800 Sobic001G123400 Sobic001G123400 Sobic004G234000--Sobic001G123400 Sobic004G288000 Sobic004G288000 Sobic004G234000--Sobic004G288000 Sobic003G394000 Sobic003G394000 Sobic004G234000--Sobic003G394000 Sobic007G009900 Sobic007G009900 Sobic004G234000--Sobic007G009900 Sobic004G200100--Sobic003G394000 Sobic009G170900 Sobic009G170900 Sobic004G200100--Sobic009G170900 Sobic007G136000 Sobic007G136000 Sobic004G200100--Sobic007G136000 Sobic004G200100--Sobic004G234000 Sobic004G200100--Sobic002G381800 Sobic005G160801 Sobic005G160801 Sobic004G200100--Sobic005G160801 Sobic010G082300 Sobic010G082300 Sobic004G200100--Sobic010G082300 Sobic004G060400 Sobic004G060400 Sobic004G200100--Sobic004G060400 Sobic004G348000 Sobic004G348000 Sobic004G200100--Sobic004G348000 Sobic001G057900 Sobic001G057900 Sobic003G074300--Sobic001G057900 Sobic003G074300--Sobic004G234000 Sobic003G074300--Sobic001G156200 Sobic003G074300--Sobic004G200100 Sobic005G067200 Sobic005G067200 Sobic003G074300--Sobic005G067200 Sobic010G039700 Sobic010G039700 Sobic003G074300--Sobic010G039700 Sobic003G370800 Sobic003G370800 Sobic003G074300--Sobic003G370800 Sobic001G407300 Sobic001G407300 Sobic003G074300--Sobic001G407300 Sobic007G195900 Sobic007G195900 Sobic003G074300--Sobic007G195900 Sobic005G106700 Sobic005G106700 Sobic004G327900--Sobic005G106700 Sobic004G327900--Sobic004G234000 Sobic004G327900--Sobic001G123400 Sobic004G327900--Sobic004G200100 Sobic009G212900 Sobic009G212900 Sobic004G327900--Sobic009G212900 Sobic003G106800 Sobic003G106800 Sobic004G327900--Sobic003G106800 Sobic010G093200 Sobic010G093200 Sobic004G327900--Sobic010G093200 Sobic005G014500 Sobic005G014500 Sobic004G327900--Sobic005G014500 Sobic004G327900--Sobic007G009900 Sobic001G156200--Sobic004G234000 Sobic001G156200--Sobic001G057900 Sobic001G156200--Sobic003G074300 Sobic004G355900 Sobic004G355900 Sobic001G156200--Sobic004G355900 Sobic002G083100 Sobic002G083100 Sobic001G156200--Sobic002G083100 Sobic004G014900 Sobic004G014900 Sobic001G156200--Sobic004G014900 Sobic004G255100 Sobic004G255100 Sobic001G156200--Sobic004G255100 Sobic001G156200--Sobic004G200100 Sobic001G003400 Sobic001G003400 Sobic001G156200--Sobic001G003400 Sobic002G381800--Sobic010G082300 Sobic003G302600 Sobic003G302600 Sobic002G381800--Sobic003G302600 Sobic009G176200 Sobic009G176200 Sobic002G381800--Sobic009G176200 Sobic001G005400 Sobic001G005400 Sobic002G381800--Sobic001G005400 Sobic003G061600 Sobic003G061600 Sobic002G381800--Sobic003G061600 Sobic004G252850 Sobic004G252850 Sobic002G381800--Sobic004G252850 Sobic002G381800--Sobic004G348000 Sobic003G211000 Sobic003G211000 Sobic002G381800--Sobic003G211000 Sobic002G381800--Sobic009G170900 Sobic001G123400--Sobic010G093200 Sobic001G123400--Sobic007G009900 Sobic001G123400--Sobic004G327900 Sobic001G520600 Sobic001G520600 Sobic001G123400--Sobic001G520600 Sobic001G123400--Sobic009G212900 Sobic001G123400--Sobic005G106700 Sobic001G123400--Sobic004G234000 Sobic004G145550 Sobic004G145550 Sobic001G123400--Sobic004G145550 Sobic001G123400--Sobic004G200100 Sobic004G031900 Sobic004G031900 Sobic004G288000--Sobic004G031900 Sobic004G288000--Sobic004G060400 Sobic009G249400 Sobic009G249400 Sobic004G288000--Sobic009G249400 Sobic010G187800 Sobic010G187800 Sobic004G288000--Sobic010G187800 Sobic008G191900 Sobic008G191900 Sobic004G288000--Sobic008G191900 Sobic002G359100 Sobic002G359100 Sobic004G288000--Sobic002G359100 Sobic004G288000--Sobic009G176200 Sobic003G066300 Sobic003G066300 Sobic004G288000--Sobic003G066300 Sobic010G074000 Sobic010G074000 Sobic004G288000--Sobic010G074000 Sobic003G394000--Sobic004G200100 Sobic003G406060 Sobic003G406060 Sobic003G394000--Sobic003G406060 Sobic005G200100 Sobic005G200100 Sobic003G394000--Sobic005G200100 Sobic001G251000 Sobic001G251000 Sobic003G394000--Sobic001G251000 Sobic003G394000--Sobic010G074000 Sobic003G394000--Sobic004G060400 Sobic002G027901 Sobic002G027901 Sobic003G394000--Sobic002G027901 Sobic003G394000--Sobic004G348000 Sobic003G254200 Sobic003G254200 Sobic003G394000--Sobic003G254200 Sobic010G103400 Sobic010G103400 Sobic007G009900--Sobic010G103400 Sobic008G104900 Sobic008G104900 Sobic007G009900--Sobic008G104900 Sobic007G009900--Sobic001G123400 Sobic002G408400 Sobic002G408400 Sobic007G009900--Sobic002G408400 Sobic007G009900--Sobic003G370800 Sobic001G486800 Sobic001G486800 Sobic007G009900--Sobic001G486800 Sobic007G009900--Sobic009G212900 Sobic008G057200 Sobic008G057200 Sobic007G009900--Sobic008G057200 Sobic007G009900--Sobic004G200100
Octagon: transcription factors


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