Gene annotation
Transcriptome id Sobic.004G288000.1
Synonym Sb04g032360
Functional annotation zinc finger, C3HC4 type domain containing protein, expressed
UniProt C5Y1D2
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF141
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT4G32600 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os02g44700.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021448
Brachypodium KQK00709
Barley HORVU6Hr1G064300.1 , HORVU6Hr1G064300.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G031900 phosphatidylinositol transfer, putative, expressed -
2 Sobic.004G060400 ANTH/ENTH domain containing protein, putative, expressed -
3 Sobic.009G249400 protein kinase family protein, putative, expressed -
4 Sobic.010G187800 expressed protein -
5 Sobic.008G191900 CHX28, putative, expressed -
6 Sobic.002G359100 expressed protein -
7 Sobic.009G176200 expressed protein -
8 Sobic.003G066300 expressed protein -
9 Sobic.010G074000 expressed protein -
10 Sobic.003G254200 ATROPGEF7/ROPGEF7, putative, expressed -
11 Sobic.007G161100 ENTH domain containing protein, expressed -
12 Sobic.004G348000 white-brown complex homolog protein, putative, expressed -
13 Sobic.004G014900 csAtPR5, putative, expressed -
14 Sobic.001G380000 THION28 - Plant thionin family protein precursor, expressed -
15 Sobic.004G255100 nitrate-induced NOI protein, putative, expressed -
16 Sobic.003G061600 RALFL11 - Rapid ALkalinization Factor RALF family protein precursor, putative -
17 Sobic.003G211000 - -
18 Sobic.004G048900 myosin heavy chain, putative, expressed -
19 Sobic.001G003400 heavy-metal-associated domain-containing protein, putative, expressed -
20 Sobic.003G208900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G288000 Sobic004G288000 Sobic004G031900 Sobic004G031900 Sobic004G288000--Sobic004G031900 Sobic004G060400 Sobic004G060400 Sobic004G288000--Sobic004G060400 Sobic009G249400 Sobic009G249400 Sobic004G288000--Sobic009G249400 Sobic010G187800 Sobic010G187800 Sobic004G288000--Sobic010G187800 Sobic008G191900 Sobic008G191900 Sobic004G288000--Sobic008G191900 Sobic002G359100 Sobic002G359100 Sobic004G288000--Sobic002G359100 Sobic009G176200 Sobic009G176200 Sobic004G288000--Sobic009G176200 Sobic003G066300 Sobic003G066300 Sobic004G288000--Sobic003G066300 Sobic010G074000 Sobic010G074000 Sobic004G288000--Sobic010G074000 Sobic004G031900--Sobic009G176200 Sobic004G031900--Sobic009G249400 Sobic004G031900--Sobic010G187800 Sobic004G031900--Sobic008G191900 Sobic004G031900--Sobic002G359100 Sobic001G380000 Sobic001G380000 Sobic004G031900--Sobic001G380000 Sobic003G208900 Sobic003G208900 Sobic004G031900--Sobic003G208900 Sobic005G039000 Sobic005G039000 Sobic004G031900--Sobic005G039000 Sobic004G031900--Sobic010G074000 Sobic004G348000 Sobic004G348000 Sobic004G060400--Sobic004G348000 Sobic004G060400--Sobic010G074000 Sobic004G060400--Sobic004G031900 Sobic004G060400--Sobic009G176200 Sobic004G060400--Sobic009G249400 Sobic003G254200 Sobic003G254200 Sobic004G060400--Sobic003G254200 Sobic007G161100 Sobic007G161100 Sobic004G060400--Sobic007G161100 Sobic004G060400--Sobic004G288000 Sobic001G196400 Sobic001G196400 Sobic004G060400--Sobic001G196400 Sobic009G249400--Sobic003G208900 Sobic009G249400--Sobic005G039000 Sobic007G185801 Sobic007G185801 Sobic009G249400--Sobic007G185801 Sobic009G249400--Sobic010G187800 Sobic009G249400--Sobic003G254200 Sobic008G052800 Sobic008G052800 Sobic009G249400--Sobic008G052800 Sobic009G249400--Sobic010G074000 Sobic003G305500 Sobic003G305500 Sobic009G249400--Sobic003G305500 Sobic002G405300 Sobic002G405300 Sobic009G249400--Sobic002G405300 Sobic004G185000 Sobic004G185000 Sobic010G187800--Sobic004G185000 Sobic001G513400 Sobic001G513400 Sobic010G187800--Sobic001G513400 Sobic010G187800--Sobic001G380000 Sobic010G187800--Sobic002G405300 Sobic010G187800--Sobic009G176200 Sobic004G123100 Sobic004G123100 Sobic010G187800--Sobic004G123100 Sobic003G233800 Sobic003G233800 Sobic010G187800--Sobic003G233800 Sobic010G187800--Sobic009G249400 Sobic001G036200 Sobic001G036200 Sobic010G187800--Sobic001G036200 Sobic008G191900--Sobic002G359100 Sobic003G061600 Sobic003G061600 Sobic008G191900--Sobic003G061600 Sobic008G191900--Sobic004G031900 Sobic008G191900--Sobic001G380000 Sobic008G191900--Sobic010G187800 Sobic008G191900--Sobic009G176200 Sobic008G191900--Sobic003G233800 Sobic008G191900--Sobic001G036200 Sobic010G140100 Sobic010G140100 Sobic008G191900--Sobic010G140100 Sobic002G359100--Sobic008G191900 Sobic002G359100--Sobic001G380000 Sobic002G359100--Sobic010G140100 Sobic002G359100--Sobic003G233800 Sobic008G019200 Sobic008G019200 Sobic002G359100--Sobic008G019200 Sobic007G220150 Sobic007G220150 Sobic002G359100--Sobic007G220150 Sobic004G080800 Sobic004G080800 Sobic002G359100--Sobic004G080800 Sobic002G359100--Sobic004G031900 Sobic003G054800 Sobic003G054800 Sobic002G359100--Sobic003G054800 Sobic003G211000 Sobic003G211000 Sobic009G176200--Sobic003G211000 Sobic009G176200--Sobic010G187800 Sobic009G176200--Sobic004G031900 Sobic009G176200--Sobic001G380000 Sobic009G176200--Sobic009G249400 Sobic009G176200--Sobic003G061600 Sobic009G176200--Sobic003G233800 Sobic009G176200--Sobic005G039000 Sobic009G176200--Sobic004G185000 Sobic003G064100 Sobic003G064100 Sobic003G066300--Sobic003G064100 Sobic007G209900 Sobic007G209900 Sobic003G066300--Sobic007G209900 Sobic001G435300 Sobic001G435300 Sobic003G066300--Sobic001G435300 Sobic003G066300--Sobic003G208900 Sobic007G112832 Sobic007G112832 Sobic003G066300--Sobic007G112832 Sobic004G042800 Sobic004G042800 Sobic003G066300--Sobic004G042800 Sobic003G066300--Sobic009G249400 Sobic003G066300--Sobic004G031900 Sobic003G066300--Sobic001G196400 Sobic010G074000--Sobic003G254200 Sobic010G074000--Sobic009G249400 Sobic010G074000--Sobic007G185801 Sobic010G074000--Sobic003G208900 Sobic006G232700 Sobic006G232700 Sobic010G074000--Sobic006G232700 Sobic010G074000--Sobic010G187800 Sobic005G147900 Sobic005G147900 Sobic010G074000--Sobic005G147900 Sobic010G074000--Sobic008G052800 Sobic010G030500 Sobic010G030500 Sobic010G074000--Sobic010G030500
Octagon: transcription factors


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