Gene annotation
Transcriptome id Sobic.008G191900.1
Synonym chx28, Sb08g023210
Functional annotation CHX28, putative, expressed
UniProt C5YT38
Pfam PF00999
Panther DB PTHR32468 PTHR32468:SF18
NCBI CDD KOG1650; Predicted K+/H+-antiporter
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT3G52080 : cation/hydrogen exchanger 28
RAP-DB (Rice) LOC_Os12g44300.1 : CHX28, putative, expressed
MaizeGDB (Corn) Zm00025a025062
Brachypodium KQJ85581
Barley HORVU5Hr1G000570.2 , HORVU5Hr1G000570.1
Wheat TraesCS5D02G002400 , TraesCS5A02G002800 , TraesCS5B02G003000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G359100 expressed protein -
2 Sobic.003G061600 RALFL11 - Rapid ALkalinization Factor RALF family protein precursor, putative -
3 Sobic.004G031900 phosphatidylinositol transfer, putative, expressed -
4 Sobic.001G380000 THION28 - Plant thionin family protein precursor, expressed -
5 Sobic.010G187800 expressed protein -
6 Sobic.009G176200 expressed protein -
7 Sobic.003G233800 serine/threonine-protein kinase, putative, expressed -
8 Sobic.001G036200 - -
9 Sobic.010G140100 - -
10 Sobic.001G351600 hydrolase protein, putative, expressed -
11 Sobic.004G185000 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
12 Sobic.001G513400 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
13 Sobic.004G123100 ATROPGEF7/ROPGEF7, putative, expressed -
14 Sobic.002G405300 START domain containing protein, expressed -
15 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
16 Sobic.004G041800 expressed protein -
17 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
18 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
19 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
20 Sobic.007G222700 - -


Gene co-expression network
sample Sobic008G191900 Sobic008G191900 Sobic002G359100 Sobic002G359100 Sobic008G191900--Sobic002G359100 Sobic003G061600 Sobic003G061600 Sobic008G191900--Sobic003G061600 Sobic004G031900 Sobic004G031900 Sobic008G191900--Sobic004G031900 Sobic001G380000 Sobic001G380000 Sobic008G191900--Sobic001G380000 Sobic010G187800 Sobic010G187800 Sobic008G191900--Sobic010G187800 Sobic009G176200 Sobic009G176200 Sobic008G191900--Sobic009G176200 Sobic003G233800 Sobic003G233800 Sobic008G191900--Sobic003G233800 Sobic001G036200 Sobic001G036200 Sobic008G191900--Sobic001G036200 Sobic010G140100 Sobic010G140100 Sobic008G191900--Sobic010G140100 Sobic002G359100--Sobic008G191900 Sobic002G359100--Sobic001G380000 Sobic002G359100--Sobic010G140100 Sobic002G359100--Sobic003G233800 Sobic008G019200 Sobic008G019200 Sobic002G359100--Sobic008G019200 Sobic007G220150 Sobic007G220150 Sobic002G359100--Sobic007G220150 Sobic004G080800 Sobic004G080800 Sobic002G359100--Sobic004G080800 Sobic002G359100--Sobic004G031900 Sobic003G054800 Sobic003G054800 Sobic002G359100--Sobic003G054800 Sobic003G061600--Sobic008G191900 Sobic003G061600--Sobic009G176200 Sobic006G244100 Sobic006G244100 Sobic003G061600--Sobic006G244100 Sobic010G063700 Sobic010G063700 Sobic003G061600--Sobic010G063700 Sobic010G016100 Sobic010G016100 Sobic003G061600--Sobic010G016100 Sobic004G008500 Sobic004G008500 Sobic003G061600--Sobic004G008500 Sobic002G029000 Sobic002G029000 Sobic003G061600--Sobic002G029000 Sobic003G061600--Sobic010G187800 Sobic010G276200 Sobic010G276200 Sobic003G061600--Sobic010G276200 Sobic004G031900--Sobic009G176200 Sobic009G249400 Sobic009G249400 Sobic004G031900--Sobic009G249400 Sobic004G031900--Sobic010G187800 Sobic004G031900--Sobic008G191900 Sobic004G031900--Sobic002G359100 Sobic004G031900--Sobic001G380000 Sobic003G208900 Sobic003G208900 Sobic004G031900--Sobic003G208900 Sobic005G039000 Sobic005G039000 Sobic004G031900--Sobic005G039000 Sobic010G074000 Sobic010G074000 Sobic004G031900--Sobic010G074000 Sobic001G380000--Sobic003G233800 Sobic001G513400 Sobic001G513400 Sobic001G380000--Sobic001G513400 Sobic001G380000--Sobic010G187800 Sobic001G380000--Sobic003G054800 Sobic004G289900 Sobic004G289900 Sobic001G380000--Sobic004G289900 Sobic001G380000--Sobic001G036200 Sobic002G405300 Sobic002G405300 Sobic001G380000--Sobic002G405300 Sobic006G176200 Sobic006G176200 Sobic001G380000--Sobic006G176200 Sobic007G080100 Sobic007G080100 Sobic001G380000--Sobic007G080100 Sobic004G185000 Sobic004G185000 Sobic010G187800--Sobic004G185000 Sobic010G187800--Sobic001G513400 Sobic010G187800--Sobic001G380000 Sobic010G187800--Sobic002G405300 Sobic010G187800--Sobic009G176200 Sobic004G123100 Sobic004G123100 Sobic010G187800--Sobic004G123100 Sobic010G187800--Sobic003G233800 Sobic010G187800--Sobic009G249400 Sobic010G187800--Sobic001G036200 Sobic003G211000 Sobic003G211000 Sobic009G176200--Sobic003G211000 Sobic009G176200--Sobic010G187800 Sobic009G176200--Sobic004G031900 Sobic009G176200--Sobic001G380000 Sobic009G176200--Sobic009G249400 Sobic009G176200--Sobic003G061600 Sobic009G176200--Sobic003G233800 Sobic009G176200--Sobic005G039000 Sobic009G176200--Sobic004G185000 Sobic003G233800--Sobic001G380000 Sobic003G233800--Sobic006G176200 Sobic007G222700 Sobic007G222700 Sobic003G233800--Sobic007G222700 Sobic007G061800 Sobic007G061800 Sobic003G233800--Sobic007G061800 Sobic009G227500 Sobic009G227500 Sobic003G233800--Sobic009G227500 Sobic004G091000 Sobic004G091000 Sobic003G233800--Sobic004G091000 Sobic006G173400 Sobic006G173400 Sobic003G233800--Sobic006G173400 Sobic006G234400 Sobic006G234400 Sobic003G233800--Sobic006G234400 Sobic010G177600 Sobic010G177600 Sobic003G233800--Sobic010G177600 Sobic010G254100 Sobic010G254100 Sobic001G036200--Sobic010G254100 Sobic009G091000 Sobic009G091000 Sobic001G036200--Sobic009G091000 Sobic009G252000 Sobic009G252000 Sobic001G036200--Sobic009G252000 Sobic007G221932 Sobic007G221932 Sobic001G036200--Sobic007G221932 Sobic010G034300 Sobic010G034300 Sobic001G036200--Sobic010G034300 Sobic008G097800 Sobic008G097800 Sobic001G036200--Sobic008G097800 Sobic001G466100 Sobic001G466100 Sobic001G036200--Sobic001G466100 Sobic001G351600 Sobic001G351600 Sobic001G036200--Sobic001G351600 Sobic004G336401 Sobic004G336401 Sobic001G036200--Sobic004G336401 Sobic001G278100 Sobic001G278100 Sobic010G140100--Sobic001G278100 Sobic001G479700 Sobic001G479700 Sobic010G140100--Sobic001G479700 Sobic006G127800 Sobic006G127800 Sobic010G140100--Sobic006G127800 Sobic003G114900 Sobic003G114900 Sobic010G140100--Sobic003G114900 Sobic010G140100--Sobic006G234400 Sobic010G140100--Sobic004G080800 Sobic010G140100--Sobic006G173400 Sobic006G270800 Sobic006G270800 Sobic010G140100--Sobic006G270800 Sobic003G114800 Sobic003G114800 Sobic010G140100--Sobic003G114800
Octagon: transcription factors


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