Gene annotation
Transcriptome id Sobic.003G233800.1
Synonym AtPERK12, IGI1, Sb03g029150
Functional annotation serine/threonine-protein kinase, putative, expressed
UniProt A0A1B6Q4X1
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF36
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G23540 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g37120.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a038660 , Zm00025a003642 , Zm00025a042833
Brachypodium PNT72459 , KQK08907 , PNT72865 , KQK09745
Barley HORVU3Hr1G071830.20 , HORVU7Hr1G072620.23 , HORVU7Hr1G072620.21 , HORVU7Hr1G072620.20 , HORVU7Hr1G072620.26 , HORVU7Hr1G072620.25 , HORVU7Hr1G072620.2 , HORVU7Hr1G072620.3 , HORVU7Hr1G072620.8 , HORVU7Hr1G072620.4 , HORVU7Hr1G072620.9 , HORVU7Hr1G072620.7 , HORVU7Hr1G118610.6 , HORVU7Hr1G118610.7 , HORVU7Hr1G118610.5 , HORVU7Hr1G118610.2 , HORVU7Hr1G118610.3 , HORVU7Hr1G118610.8 , HORVU7Hr1G118610.9 , HORVU3Hr1G071830.18 , HORVU3Hr1G071830.19 , HORVU3Hr1G071830.16 , HORVU3Hr1G071830.17 , HORVU3Hr1G071830.12 , HORVU3Hr1G071830.13 , HORVU3Hr1G071830.10 , HORVU7Hr1G072620.18 , HORVU7Hr1G072620.19 , HORVU7Hr1G072620.12 , HORVU7Hr1G072620.13 , HORVU7Hr1G072620.10 , HORVU7Hr1G072620.11 , HORVU7Hr1G072620.16 , HORVU7Hr1G072620.17 , HORVU7Hr1G072620.14 , HORVU7Hr1G072620.15 , HORVU7Hr1G072620.22 , HORVU7Hr1G072620.24 , HORVU3Hr1G057190.3 , HORVU3Hr1G057190.2 , HORVU3Hr1G057190.1 , HORVU3Hr1G057190.6 , HORVU3Hr1G057190.5 , HORVU3Hr1G057190.4 , HORVU3Hr1G071830.8 , HORVU3Hr1G071830.9 , HORVU3Hr1G071830.4 , HORVU3Hr1G071830.5 , HORVU3Hr1G071830.6 , HORVU3Hr1G071830.7 , HORVU3Hr1G071830.1 , HORVU7Hr1G047570.1 , HORVU7Hr1G047570.2 , HORVU7Hr1G047570.3 , HORVU7Hr1G047570.4 , HORVU3Hr1G071830.14 , HORVU3Hr1G071830.15 , HORVU7Hr1G118610.18 , HORVU7Hr1G118610.19 , HORVU7Hr1G118610.14 , HORVU7Hr1G118610.15 , HORVU7Hr1G118610.16 , HORVU7Hr1G118610.17 , HORVU7Hr1G118610.10 , HORVU7Hr1G118610.11 , HORVU7Hr1G118610.12 , HORVU7Hr1G118610.13
Wheat TraesCS3B02G259100 , TraesCS7A02G231900 , TraesCS3A02G290300 , TraesCS3A02G290300 , TraesCS3A02G290300 , TraesCS3A02G229800 , TraesCS7A02G231900 , TraesCS3B02G325100 , TraesCS3B02G325100 , TraesCS3D02G290100 , TraesCS3D02G290100
Populus -


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cDNA sequences
Sobic.003G233800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G380000 THION28 - Plant thionin family protein precursor, expressed -
2 Sobic.006G176200 OsSub43 - Putative Subtilisin homologue, expressed -
3 Sobic.007G222700 - -
4 Sobic.007G061800 transporter family protein, putative, expressed -
5 Sobic.009G227500 aspartyl protease family protein, putative, expressed -
6 Sobic.004G091000 pectate lyase precursor, putative, expressed K01728: pectate lyase
7 Sobic.006G173400 actin-depolymerizing factor, putative, expressed K05765: cofilin
8 Sobic.006G234400 DUF617 domain containing protein, expressed -
9 Sobic.010G177600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
10 Sobic.010G118800 - -
11 Sobic.003G405800 CBS domain containing membrane protein, putative, expressed -
12 Sobic.005G000200 lipase, putative, expressed -
13 Sobic.002G128700 expressed protein -
14 Sobic.001G364700 glycosyl transferase 8 domain containing protein, putative, expressed -
15 Sobic.002G405300 START domain containing protein, expressed -
16 Sobic.008G075800 - -
17 Sobic.001G036200 - -
18 Sobic.003G114800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.001G222800 expressed protein -
20 Sobic.005G009700 expressed protein -


Gene co-expression network
sample Sobic003G233800 Sobic003G233800 Sobic001G380000 Sobic001G380000 Sobic003G233800--Sobic001G380000 Sobic006G176200 Sobic006G176200 Sobic003G233800--Sobic006G176200 Sobic007G222700 Sobic007G222700 Sobic003G233800--Sobic007G222700 Sobic007G061800 Sobic007G061800 Sobic003G233800--Sobic007G061800 Sobic009G227500 Sobic009G227500 Sobic003G233800--Sobic009G227500 Sobic004G091000 Sobic004G091000 Sobic003G233800--Sobic004G091000 Sobic006G173400 Sobic006G173400 Sobic003G233800--Sobic006G173400 Sobic006G234400 Sobic006G234400 Sobic003G233800--Sobic006G234400 Sobic010G177600 Sobic010G177600 Sobic003G233800--Sobic010G177600 Sobic001G380000--Sobic003G233800 Sobic001G513400 Sobic001G513400 Sobic001G380000--Sobic001G513400 Sobic010G187800 Sobic010G187800 Sobic001G380000--Sobic010G187800 Sobic003G054800 Sobic003G054800 Sobic001G380000--Sobic003G054800 Sobic004G289900 Sobic004G289900 Sobic001G380000--Sobic004G289900 Sobic001G036200 Sobic001G036200 Sobic001G380000--Sobic001G036200 Sobic002G405300 Sobic002G405300 Sobic001G380000--Sobic002G405300 Sobic001G380000--Sobic006G176200 Sobic007G080100 Sobic007G080100 Sobic001G380000--Sobic007G080100 Sobic003G405800 Sobic003G405800 Sobic006G176200--Sobic003G405800 Sobic009G087200 Sobic009G087200 Sobic006G176200--Sobic009G087200 Sobic001G511100 Sobic001G511100 Sobic006G176200--Sobic001G511100 Sobic004G318300 Sobic004G318300 Sobic006G176200--Sobic004G318300 Sobic003G027300 Sobic003G027300 Sobic006G176200--Sobic003G027300 Sobic010G230200 Sobic010G230200 Sobic006G176200--Sobic010G230200 Sobic008G043400 Sobic008G043400 Sobic006G176200--Sobic008G043400 Sobic005G031700 Sobic005G031700 Sobic006G176200--Sobic005G031700 Sobic001G473700 Sobic001G473700 Sobic006G176200--Sobic001G473700 Sobic010G118800 Sobic010G118800 Sobic007G222700--Sobic010G118800 Sobic001G364700 Sobic001G364700 Sobic007G222700--Sobic001G364700 Sobic002G225800 Sobic002G225800 Sobic007G222700--Sobic002G225800 Sobic005G000200 Sobic005G000200 Sobic007G222700--Sobic005G000200 Sobic007G148233 Sobic007G148233 Sobic007G222700--Sobic007G148233 Sobic005G009700 Sobic005G009700 Sobic007G222700--Sobic005G009700 Sobic001G222800 Sobic001G222800 Sobic007G222700--Sobic001G222800 Sobic007G222700--Sobic007G061800 Sobic001G539820 Sobic001G539820 Sobic007G222700--Sobic001G539820 Sobic008G075800 Sobic008G075800 Sobic007G061800--Sobic008G075800 Sobic007G061800--Sobic010G118800 Sobic007G061800--Sobic001G222800 Sobic007G061800--Sobic010G177600 Sobic007G061800--Sobic001G364700 Sobic007G061800--Sobic007G222700 Sobic007G061800--Sobic006G234400 Sobic007G061800--Sobic009G227500 Sobic010G034200 Sobic010G034200 Sobic007G061800--Sobic010G034200 Sobic001G400400 Sobic001G400400 Sobic009G227500--Sobic001G400400 Sobic009G227500--Sobic010G034200 Sobic009G227500--Sobic007G061800 Sobic002G395100 Sobic002G395100 Sobic009G227500--Sobic002G395100 Sobic009G227500--Sobic008G075800 Sobic009G227500--Sobic001G222800 Sobic009G227500--Sobic006G234400 Sobic009G227500--Sobic010G177600 Sobic006G219700 Sobic006G219700 Sobic009G227500--Sobic006G219700 Sobic003G114800 Sobic003G114800 Sobic004G091000--Sobic003G114800 Sobic007G134260 Sobic007G134260 Sobic004G091000--Sobic007G134260 Sobic007G103000 Sobic007G103000 Sobic004G091000--Sobic007G103000 Sobic003G232100 Sobic003G232100 Sobic004G091000--Sobic003G232100 Sobic003G147700 Sobic003G147700 Sobic004G091000--Sobic003G147700 Sobic004G091000--Sobic005G000200 Sobic006G270800 Sobic006G270800 Sobic004G091000--Sobic006G270800 Sobic005G122100 Sobic005G122100 Sobic004G091000--Sobic005G122100 Sobic004G091000--Sobic005G009700 Sobic006G173400--Sobic003G114800 Sobic006G173400--Sobic004G091000 Sobic006G173400--Sobic005G000200 Sobic002G128700 Sobic002G128700 Sobic006G173400--Sobic002G128700 Sobic008G102850 Sobic008G102850 Sobic006G173400--Sobic008G102850 Sobic008G079200 Sobic008G079200 Sobic006G173400--Sobic008G079200 Sobic006G173400--Sobic003G147700 Sobic006G173400--Sobic007G103000 Sobic005G065300 Sobic005G065300 Sobic006G173400--Sobic005G065300 Sobic006G234400--Sobic007G061800 Sobic006G234400--Sobic001G400400 Sobic006G234400--Sobic001G222800 Sobic006G234400--Sobic010G034200 Sobic003G197500 Sobic003G197500 Sobic006G234400--Sobic003G197500 Sobic009G253700 Sobic009G253700 Sobic006G234400--Sobic009G253700 Sobic006G234400--Sobic009G227500 Sobic006G234400--Sobic006G173400 Sobic006G234400--Sobic010G177600 Sobic010G177600--Sobic007G061800 Sobic010G177600--Sobic008G075800 Sobic010G177600--Sobic001G222800 Sobic010G177600--Sobic010G118800 Sobic009G166000 Sobic009G166000 Sobic010G177600--Sobic009G166000 Sobic004G331500 Sobic004G331500 Sobic010G177600--Sobic004G331500 Sobic010G177600--Sobic006G234400 Sobic010G177600--Sobic009G227500 Sobic010G177600--Sobic007G222700
Octagon: transcription factors


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