Gene annotation
Transcriptome id Sobic.003G061600.1
Synonym
Functional annotation RALFL11 - Rapid ALkalinization Factor RALF family protein precursor, putative
UniProt A0A1B6Q1K7
Pfam PF05498
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g13380.1 : RALFL11 - Rapid ALkalinization Factor RALF family protein precursor, putative
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G061600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G191900 CHX28, putative, expressed -
2 Sobic.009G176200 expressed protein -
3 Sobic.006G244100 OsFBDUF35 - F-box and DUF domain containing protein, expressed -
4 Sobic.010G063700 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
5 Sobic.010G016100 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
6 Sobic.004G008500 - -
7 Sobic.002G029000 protein kinase, putative, expressed -
8 Sobic.010G187800 expressed protein -
9 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.006G096700 extracellular ligand-gated ion channel, putative, expressed -
11 Sobic.003G211000 - -
12 Sobic.004G123100 ATROPGEF7/ROPGEF7, putative, expressed -
13 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
14 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
15 Sobic.006G105500 pectinesterase, putative, expressed -
16 Sobic.001G152800 pollen preferential protein, putative, expressed -
17 Sobic.007G146300 pectinesterase, putative, expressed -
18 Sobic.010G279600 ZOS2-19 - C2H2 zinc finger protein, expressed -
19 Sobic.004G334900 vesicle-associated membrane protein, putative, expressed K08515: vesicle-associated membrane protein 7
20 Sobic.001G445400 expressed protein -


Gene co-expression network
sample Sobic003G061600 Sobic003G061600 Sobic008G191900 Sobic008G191900 Sobic003G061600--Sobic008G191900 Sobic009G176200 Sobic009G176200 Sobic003G061600--Sobic009G176200 Sobic006G244100 Sobic006G244100 Sobic003G061600--Sobic006G244100 Sobic010G063700 Sobic010G063700 Sobic003G061600--Sobic010G063700 Sobic010G016100 Sobic010G016100 Sobic003G061600--Sobic010G016100 Sobic004G008500 Sobic004G008500 Sobic003G061600--Sobic004G008500 Sobic002G029000 Sobic002G029000 Sobic003G061600--Sobic002G029000 Sobic010G187800 Sobic010G187800 Sobic003G061600--Sobic010G187800 Sobic010G276200 Sobic010G276200 Sobic003G061600--Sobic010G276200 Sobic002G359100 Sobic002G359100 Sobic008G191900--Sobic002G359100 Sobic008G191900--Sobic003G061600 Sobic004G031900 Sobic004G031900 Sobic008G191900--Sobic004G031900 Sobic001G380000 Sobic001G380000 Sobic008G191900--Sobic001G380000 Sobic008G191900--Sobic010G187800 Sobic008G191900--Sobic009G176200 Sobic003G233800 Sobic003G233800 Sobic008G191900--Sobic003G233800 Sobic001G036200 Sobic001G036200 Sobic008G191900--Sobic001G036200 Sobic010G140100 Sobic010G140100 Sobic008G191900--Sobic010G140100 Sobic003G211000 Sobic003G211000 Sobic009G176200--Sobic003G211000 Sobic009G176200--Sobic010G187800 Sobic009G176200--Sobic004G031900 Sobic009G176200--Sobic001G380000 Sobic009G249400 Sobic009G249400 Sobic009G176200--Sobic009G249400 Sobic009G176200--Sobic003G061600 Sobic009G176200--Sobic003G233800 Sobic005G039000 Sobic005G039000 Sobic009G176200--Sobic005G039000 Sobic004G185000 Sobic004G185000 Sobic009G176200--Sobic004G185000 Sobic010G246132 Sobic010G246132 Sobic006G244100--Sobic010G246132 Sobic004G334900 Sobic004G334900 Sobic006G244100--Sobic004G334900 Sobic006G105500 Sobic006G105500 Sobic006G244100--Sobic006G105500 Sobic010G257700 Sobic010G257700 Sobic006G244100--Sobic010G257700 Sobic004G359900 Sobic004G359900 Sobic006G244100--Sobic004G359900 Sobic010G151575 Sobic010G151575 Sobic006G244100--Sobic010G151575 Sobic002G224000 Sobic002G224000 Sobic006G244100--Sobic002G224000 Sobic004G197200 Sobic004G197200 Sobic006G244100--Sobic004G197200 Sobic002G121800 Sobic002G121800 Sobic006G244100--Sobic002G121800 Sobic010G063700--Sobic010G016100 Sobic001G445400 Sobic001G445400 Sobic010G063700--Sobic001G445400 Sobic008G138100 Sobic008G138100 Sobic010G063700--Sobic008G138100 Sobic010G140700 Sobic010G140700 Sobic010G063700--Sobic010G140700 Sobic002G237100 Sobic002G237100 Sobic010G063700--Sobic002G237100 Sobic006G193700 Sobic006G193700 Sobic010G063700--Sobic006G193700 Sobic005G212900 Sobic005G212900 Sobic010G063700--Sobic005G212900 Sobic005G023600 Sobic005G023600 Sobic010G063700--Sobic005G023600 Sobic001G152800 Sobic001G152800 Sobic010G063700--Sobic001G152800 Sobic010G016100--Sobic008G138100 Sobic010G016100--Sobic010G063700 Sobic010G016100--Sobic001G445400 Sobic010G016100--Sobic010G140700 Sobic010G016100--Sobic002G237100 Sobic010G016100--Sobic001G152800 Sobic010G016100--Sobic005G212900 Sobic004G180200 Sobic004G180200 Sobic010G016100--Sobic004G180200 Sobic003G322000 Sobic003G322000 Sobic010G016100--Sobic003G322000 Sobic004G008500--Sobic010G063700 Sobic004G008500--Sobic001G152800 Sobic004G008500--Sobic001G445400 Sobic004G008500--Sobic010G016100 Sobic004G008500--Sobic008G138100 Sobic007G166500 Sobic007G166500 Sobic004G008500--Sobic007G166500 Sobic010G279600 Sobic010G279600 Sobic004G008500--Sobic010G279600 Sobic004G008500--Sobic010G140700 Sobic004G008500--Sobic002G029000 Sobic002G029000--Sobic007G166500 Sobic003G434100 Sobic003G434100 Sobic002G029000--Sobic003G434100 Sobic002G323200 Sobic002G323200 Sobic002G029000--Sobic002G323200 Sobic007G146300 Sobic007G146300 Sobic002G029000--Sobic007G146300 Sobic001G024250 Sobic001G024250 Sobic002G029000--Sobic001G024250 Sobic005G209300 Sobic005G209300 Sobic002G029000--Sobic005G209300 Sobic004G080000 Sobic004G080000 Sobic002G029000--Sobic004G080000 Sobic004G041800 Sobic004G041800 Sobic002G029000--Sobic004G041800 Sobic009G072600 Sobic009G072600 Sobic002G029000--Sobic009G072600 Sobic010G187800--Sobic004G185000 Sobic001G513400 Sobic001G513400 Sobic010G187800--Sobic001G513400 Sobic010G187800--Sobic001G380000 Sobic002G405300 Sobic002G405300 Sobic010G187800--Sobic002G405300 Sobic010G187800--Sobic009G176200 Sobic004G123100 Sobic004G123100 Sobic010G187800--Sobic004G123100 Sobic010G187800--Sobic003G233800 Sobic010G187800--Sobic009G249400 Sobic010G187800--Sobic001G036200 Sobic010G276200--Sobic004G080000 Sobic010G276200--Sobic004G041800 Sobic010G276200--Sobic007G146300 Sobic010G276200--Sobic005G023600 Sobic001G466100 Sobic001G466100 Sobic010G276200--Sobic001G466100 Sobic010G176400 Sobic010G176400 Sobic010G276200--Sobic010G176400 Sobic010G276200--Sobic006G105500 Sobic010G276200--Sobic001G024250 Sobic010G089900 Sobic010G089900 Sobic010G276200--Sobic010G089900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.