Gene annotation
Transcriptome id Sobic.003G208900.1
Synonym Sb03g026980
Functional annotation Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
UniProt C5XQ75
Pfam PF07738
Panther DB PTHR12953
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G23950 : Galactose-binding protein
RAP-DB (Rice) LOC_Os01g41600.1 : Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a038449
Brachypodium PNT72318
Barley HORVU3Hr1G052360.4 , HORVU3Hr1G052360.3 , HORVU3Hr1G052360.2 , HORVU3Hr1G052360.1
Wheat TraesCS3D02G216900 , TraesCS3A02G214200 , TraesCS3B02G244900 , TraesCS3D02G216900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G305500 expressed protein -
2 Sobic.005G039000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
3 Sobic.003G343300 - -
4 Sobic.003G343000 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
5 Sobic.007G195000 cystathionin beta synthase protein, putative, expressed -
6 Sobic.007G185801 - -
7 Sobic.004G042800 protein kinase domain containing protein, expressed -
8 Sobic.007G139300 exostosin family domain containing protein, expressed -
9 Sobic.006G062100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
10 Sobic.006G059100 POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
11 Sobic.001G366700 villin protein, putative, expressed -
12 Sobic.009G249400 protein kinase family protein, putative, expressed -
13 Sobic.001G435300 C2 domain containing protein, expressed -
14 Sobic.003G317000 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
15 Sobic.001G392650 - -
16 Sobic.006G018701 - -
17 Sobic.002G049700 potassium channel AKT1, putative, expressed -
18 Sobic.006G176200 OsSub43 - Putative Subtilisin homologue, expressed -
19 Sobic.001G196400 transmembrane and coiled-coil domain-containing protein 4, putative, expressed -
20 Sobic.003G274100 THION44 - Plant thionin family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic003G208900 Sobic003G208900 Sobic003G305500 Sobic003G305500 Sobic003G208900--Sobic003G305500 Sobic005G039000 Sobic005G039000 Sobic003G208900--Sobic005G039000 Sobic003G343300 Sobic003G343300 Sobic003G208900--Sobic003G343300 Sobic003G343000 Sobic003G343000 Sobic003G208900--Sobic003G343000 Sobic007G195000 Sobic007G195000 Sobic003G208900--Sobic007G195000 Sobic007G185801 Sobic007G185801 Sobic003G208900--Sobic007G185801 Sobic004G042800 Sobic004G042800 Sobic003G208900--Sobic004G042800 Sobic007G139300 Sobic007G139300 Sobic003G208900--Sobic007G139300 Sobic006G062100 Sobic006G062100 Sobic003G208900--Sobic006G062100 Sobic003G305500--Sobic003G343000 Sobic003G305500--Sobic003G208900 Sobic003G305500--Sobic003G343300 Sobic006G059100 Sobic006G059100 Sobic003G305500--Sobic006G059100 Sobic008G134600 Sobic008G134600 Sobic003G305500--Sobic008G134600 Sobic009G062600 Sobic009G062600 Sobic003G305500--Sobic009G062600 Sobic008G124301 Sobic008G124301 Sobic003G305500--Sobic008G124301 Sobic003G445600 Sobic003G445600 Sobic003G305500--Sobic003G445600 Sobic003G305500--Sobic006G062100 Sobic005G039000--Sobic003G343300 Sobic005G039000--Sobic003G208900 Sobic005G039000--Sobic007G195000 Sobic005G039000--Sobic003G343000 Sobic005G039000--Sobic007G139300 Sobic005G039000--Sobic007G185801 Sobic005G039000--Sobic006G062100 Sobic006G018701 Sobic006G018701 Sobic005G039000--Sobic006G018701 Sobic004G327000 Sobic004G327000 Sobic005G039000--Sobic004G327000 Sobic003G343300--Sobic007G195000 Sobic003G343300--Sobic006G062100 Sobic003G343300--Sobic003G343000 Sobic003G343300--Sobic008G134600 Sobic003G343300--Sobic007G139300 Sobic003G343300--Sobic003G305500 Sobic003G343300--Sobic008G124301 Sobic001G392650 Sobic001G392650 Sobic003G343300--Sobic001G392650 Sobic003G160600 Sobic003G160600 Sobic003G343300--Sobic003G160600 Sobic003G343000--Sobic003G305500 Sobic003G343000--Sobic008G134600 Sobic003G343000--Sobic008G124301 Sobic003G343000--Sobic003G343300 Sobic003G343000--Sobic006G059100 Sobic003G343000--Sobic001G392650 Sobic003G343000--Sobic003G445600 Sobic003G343000--Sobic006G062100 Sobic003G343000--Sobic003G160600 Sobic007G195000--Sobic003G343300 Sobic007G195000--Sobic006G062100 Sobic007G195000--Sobic003G160600 Sobic007G195000--Sobic005G039000 Sobic007G195000--Sobic003G343000 Sobic007G195000--Sobic003G305500 Sobic007G195000--Sobic004G327000 Sobic007G195000--Sobic007G139300 Sobic007G195000--Sobic008G134600 Sobic007G185801--Sobic003G343000 Sobic007G185801--Sobic003G208900 Sobic007G185801--Sobic003G305500 Sobic007G185801--Sobic007G139300 Sobic007G185801--Sobic005G039000 Sobic006G176200 Sobic006G176200 Sobic007G185801--Sobic006G176200 Sobic007G185801--Sobic006G059100 Sobic009G259600 Sobic009G259600 Sobic007G185801--Sobic009G259600 Sobic001G473700 Sobic001G473700 Sobic007G185801--Sobic001G473700 Sobic004G042800--Sobic003G208900 Sobic004G042800--Sobic003G305500 Sobic001G435300 Sobic001G435300 Sobic004G042800--Sobic001G435300 Sobic001G188100 Sobic001G188100 Sobic004G042800--Sobic001G188100 Sobic002G049700 Sobic002G049700 Sobic004G042800--Sobic002G049700 Sobic004G042800--Sobic003G343000 Sobic004G160000 Sobic004G160000 Sobic004G042800--Sobic004G160000 Sobic004G042800--Sobic001G392650 Sobic004G042800--Sobic007G139300 Sobic003G405800 Sobic003G405800 Sobic007G139300--Sobic003G405800 Sobic007G139300--Sobic006G062100 Sobic007G139300--Sobic006G176200 Sobic001G366700 Sobic001G366700 Sobic007G139300--Sobic001G366700 Sobic001G529800 Sobic001G529800 Sobic007G139300--Sobic001G529800 Sobic009G087200 Sobic009G087200 Sobic007G139300--Sobic009G087200 Sobic001G220800 Sobic001G220800 Sobic007G139300--Sobic001G220800 Sobic003G313200 Sobic003G313200 Sobic007G139300--Sobic003G313200 Sobic009G158400 Sobic009G158400 Sobic007G139300--Sobic009G158400 Sobic001G037066 Sobic001G037066 Sobic006G062100--Sobic001G037066 Sobic009G260900 Sobic009G260900 Sobic006G062100--Sobic009G260900 Sobic006G062100--Sobic003G343300 Sobic006G062100--Sobic006G176200 Sobic006G062100--Sobic007G139300 Sobic009G216400 Sobic009G216400 Sobic006G062100--Sobic009G216400 Sobic003G127200 Sobic003G127200 Sobic006G062100--Sobic003G127200 Sobic007G100800 Sobic007G100800 Sobic006G062100--Sobic007G100800 Sobic002G351500 Sobic002G351500 Sobic006G062100--Sobic002G351500
Octagon: transcription factors


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