Gene annotation
Transcriptome id Sobic.001G196400.1
Synonym Sb01g017280
Functional annotation transmembrane and coiled-coil domain-containing protein 4, putative, expressed
UniProt A0A1B6QJU1
Pfam PF05277
Panther DB PTHR17920 PTHR17920:SF7
NCBI CDD KOG2385; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36210 : Protein of unknown function (DUF726)
RAP-DB (Rice) LOC_Os10g36830.1 : transmembrane and coiled-coil domain-containing protein 4, putative, expressed
MaizeGDB (Corn) Zm00025a006336
Brachypodium KQK24037 , KQJ97406
Barley HORVU4Hr1G089280.13 , HORVU4Hr1G089280.12 , HORVU4Hr1G089280.11 , HORVU4Hr1G089280.10 , HORVU4Hr1G089280.15 , HORVU4Hr1G089280.14 , HORVU1Hr1G047260.18 , HORVU1Hr1G047260.14 , HORVU1Hr1G047260.15 , HORVU1Hr1G047260.16 , HORVU1Hr1G047260.17 , HORVU1Hr1G047260.10 , HORVU1Hr1G047260.11 , HORVU1Hr1G047260.12 , HORVU1Hr1G047260.13 , HORVU4Hr1G089280.7 , HORVU1Hr1G047260.19 , HORVU4Hr1G089280.5 , HORVU1Hr1G047260.20 , HORVU1Hr1G047260.8 , HORVU1Hr1G047260.9 , HORVU1Hr1G047260.6 , HORVU1Hr1G047260.7 , HORVU1Hr1G047260.4 , HORVU1Hr1G047260.5 , HORVU1Hr1G047260.2 , HORVU1Hr1G047260.3 , HORVU1Hr1G047260.1
Wheat TraesCS1B02G202300 , TraesCS1A02G178000 , TraesCS1D02G176500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G317000 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
2 Sobic.006G232700 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
3 Sobic.007G161100 ENTH domain containing protein, expressed -
4 Sobic.003G208900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
5 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
6 Sobic.004G042800 protein kinase domain containing protein, expressed -
7 Sobic.003G305500 expressed protein -
8 Sobic.010G026200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
9 Sobic.005G039000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
10 Sobic.001G435300 C2 domain containing protein, expressed -
11 Sobic.004G059200 inactive receptor kinase At2g26730 precursor, putative, expressed -
12 Sobic.003G343000 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
13 Sobic.007G185801 - -
14 Sobic.004G160000 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
15 Sobic.002G298201 - K11593: ELF2C, eukaryotic translation initiation factor 2C
16 Sobic.006G018701 - -
17 Sobic.010G030500 - -
18 Sobic.007G112832 - -
19 Sobic.002G406801 - -
20 Sobic.001G386900 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase


Gene co-expression network
sample Sobic001G196400 Sobic001G196400 Sobic003G317000 Sobic003G317000 Sobic001G196400--Sobic003G317000 Sobic006G232700 Sobic006G232700 Sobic001G196400--Sobic006G232700 Sobic007G161100 Sobic007G161100 Sobic001G196400--Sobic007G161100 Sobic003G208900 Sobic003G208900 Sobic001G196400--Sobic003G208900 Sobic004G327000 Sobic004G327000 Sobic001G196400--Sobic004G327000 Sobic004G042800 Sobic004G042800 Sobic001G196400--Sobic004G042800 Sobic003G305500 Sobic003G305500 Sobic001G196400--Sobic003G305500 Sobic010G026200 Sobic010G026200 Sobic001G196400--Sobic010G026200 Sobic005G039000 Sobic005G039000 Sobic001G196400--Sobic005G039000 Sobic003G317000--Sobic001G196400 Sobic003G317000--Sobic003G305500 Sobic009G062600 Sobic009G062600 Sobic003G317000--Sobic009G062600 Sobic003G317000--Sobic003G208900 Sobic001G002400 Sobic001G002400 Sobic003G317000--Sobic001G002400 Sobic003G343000 Sobic003G343000 Sobic003G317000--Sobic003G343000 Sobic006G164800 Sobic006G164800 Sobic003G317000--Sobic006G164800 Sobic003G317000--Sobic006G232700 Sobic003G317000--Sobic004G042800 Sobic006G232700--Sobic001G196400 Sobic006G232700--Sobic003G317000 Sobic010G030500 Sobic010G030500 Sobic006G232700--Sobic010G030500 Sobic006G232700--Sobic003G208900 Sobic006G232700--Sobic004G042800 Sobic006G232700--Sobic003G305500 Sobic001G435300 Sobic001G435300 Sobic006G232700--Sobic001G435300 Sobic010G074000 Sobic010G074000 Sobic006G232700--Sobic010G074000 Sobic002G298201 Sobic002G298201 Sobic006G232700--Sobic002G298201 Sobic007G161100--Sobic004G327000 Sobic004G059200 Sobic004G059200 Sobic007G161100--Sobic004G059200 Sobic006G018701 Sobic006G018701 Sobic007G161100--Sobic006G018701 Sobic007G161100--Sobic010G026200 Sobic007G161100--Sobic005G039000 Sobic007G161100--Sobic001G196400 Sobic004G160000 Sobic004G160000 Sobic007G161100--Sobic004G160000 Sobic007G161100--Sobic003G208900 Sobic002G406801 Sobic002G406801 Sobic007G161100--Sobic002G406801 Sobic003G208900--Sobic003G305500 Sobic003G208900--Sobic005G039000 Sobic003G343300 Sobic003G343300 Sobic003G208900--Sobic003G343300 Sobic003G208900--Sobic003G343000 Sobic007G195000 Sobic007G195000 Sobic003G208900--Sobic007G195000 Sobic007G185801 Sobic007G185801 Sobic003G208900--Sobic007G185801 Sobic003G208900--Sobic004G042800 Sobic007G139300 Sobic007G139300 Sobic003G208900--Sobic007G139300 Sobic006G062100 Sobic006G062100 Sobic003G208900--Sobic006G062100 Sobic004G327000--Sobic006G018701 Sobic004G327000--Sobic007G161100 Sobic004G327000--Sobic004G160000 Sobic004G327000--Sobic007G195000 Sobic003G160600 Sobic003G160600 Sobic004G327000--Sobic003G160600 Sobic004G327000--Sobic003G343300 Sobic004G327000--Sobic010G026200 Sobic009G158300 Sobic009G158300 Sobic004G327000--Sobic009G158300 Sobic001G188100 Sobic001G188100 Sobic004G327000--Sobic001G188100 Sobic004G042800--Sobic003G208900 Sobic004G042800--Sobic003G305500 Sobic004G042800--Sobic001G435300 Sobic004G042800--Sobic001G188100 Sobic002G049700 Sobic002G049700 Sobic004G042800--Sobic002G049700 Sobic004G042800--Sobic003G343000 Sobic004G042800--Sobic004G160000 Sobic001G392650 Sobic001G392650 Sobic004G042800--Sobic001G392650 Sobic004G042800--Sobic007G139300 Sobic003G305500--Sobic003G343000 Sobic003G305500--Sobic003G208900 Sobic003G305500--Sobic003G343300 Sobic006G059100 Sobic006G059100 Sobic003G305500--Sobic006G059100 Sobic008G134600 Sobic008G134600 Sobic003G305500--Sobic008G134600 Sobic003G305500--Sobic009G062600 Sobic008G124301 Sobic008G124301 Sobic003G305500--Sobic008G124301 Sobic003G445600 Sobic003G445600 Sobic003G305500--Sobic003G445600 Sobic003G305500--Sobic006G062100 Sobic010G026200--Sobic004G160000 Sobic010G026200--Sobic006G018701 Sobic010G026200--Sobic004G327000 Sobic010G026200--Sobic004G059200 Sobic010G026200--Sobic003G343300 Sobic010G026200--Sobic003G343000 Sobic010G026200--Sobic002G406801 Sobic010G026200--Sobic007G195000 Sobic010G026200--Sobic001G392650 Sobic005G039000--Sobic003G343300 Sobic005G039000--Sobic003G208900 Sobic005G039000--Sobic007G195000 Sobic005G039000--Sobic003G343000 Sobic005G039000--Sobic007G139300 Sobic005G039000--Sobic007G185801 Sobic005G039000--Sobic006G062100 Sobic005G039000--Sobic006G018701 Sobic005G039000--Sobic004G327000
Octagon: transcription factors


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