Gene annotation
Transcriptome id Sobic.010G030500.1
Synonym
Functional annotation -
UniProt A0A194YH08
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.010G030500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G232700 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
2 Sobic.003G208900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
3 Sobic.005G039000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
4 Sobic.001G196400 transmembrane and coiled-coil domain-containing protein 4, putative, expressed -
5 Sobic.003G305500 expressed protein -
6 Sobic.003G317000 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
7 Sobic.001G155100 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.004G168150 - -
9 Sobic.007G185801 - -
10 Sobic.007G195000 cystathionin beta synthase protein, putative, expressed -
11 Sobic.005G147900 - -
12 Sobic.003G343300 - -
13 Sobic.004G042800 protein kinase domain containing protein, expressed -
14 Sobic.005G220680 - -
15 Sobic.003G343000 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
16 Sobic.009G249400 protein kinase family protein, putative, expressed -
17 Sobic.006G062100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
18 Sobic.010G074000 expressed protein -
19 Sobic.008G052800 - -
20 Sobic.006G059100 POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic010G030500 Sobic010G030500 Sobic006G232700 Sobic006G232700 Sobic010G030500--Sobic006G232700 Sobic003G208900 Sobic003G208900 Sobic010G030500--Sobic003G208900 Sobic005G039000 Sobic005G039000 Sobic010G030500--Sobic005G039000 Sobic001G196400 Sobic001G196400 Sobic010G030500--Sobic001G196400 Sobic003G305500 Sobic003G305500 Sobic010G030500--Sobic003G305500 Sobic003G317000 Sobic003G317000 Sobic010G030500--Sobic003G317000 Sobic001G155100 Sobic001G155100 Sobic010G030500--Sobic001G155100 Sobic004G168150 Sobic004G168150 Sobic010G030500--Sobic004G168150 Sobic007G185801 Sobic007G185801 Sobic010G030500--Sobic007G185801 Sobic006G232700--Sobic001G196400 Sobic006G232700--Sobic003G317000 Sobic006G232700--Sobic010G030500 Sobic006G232700--Sobic003G208900 Sobic004G042800 Sobic004G042800 Sobic006G232700--Sobic004G042800 Sobic006G232700--Sobic003G305500 Sobic001G435300 Sobic001G435300 Sobic006G232700--Sobic001G435300 Sobic010G074000 Sobic010G074000 Sobic006G232700--Sobic010G074000 Sobic002G298201 Sobic002G298201 Sobic006G232700--Sobic002G298201 Sobic003G208900--Sobic003G305500 Sobic003G208900--Sobic005G039000 Sobic003G343300 Sobic003G343300 Sobic003G208900--Sobic003G343300 Sobic003G343000 Sobic003G343000 Sobic003G208900--Sobic003G343000 Sobic007G195000 Sobic007G195000 Sobic003G208900--Sobic007G195000 Sobic003G208900--Sobic007G185801 Sobic003G208900--Sobic004G042800 Sobic007G139300 Sobic007G139300 Sobic003G208900--Sobic007G139300 Sobic006G062100 Sobic006G062100 Sobic003G208900--Sobic006G062100 Sobic005G039000--Sobic003G343300 Sobic005G039000--Sobic003G208900 Sobic005G039000--Sobic007G195000 Sobic005G039000--Sobic003G343000 Sobic005G039000--Sobic007G139300 Sobic005G039000--Sobic007G185801 Sobic005G039000--Sobic006G062100 Sobic006G018701 Sobic006G018701 Sobic005G039000--Sobic006G018701 Sobic004G327000 Sobic004G327000 Sobic005G039000--Sobic004G327000 Sobic001G196400--Sobic003G317000 Sobic001G196400--Sobic006G232700 Sobic007G161100 Sobic007G161100 Sobic001G196400--Sobic007G161100 Sobic001G196400--Sobic003G208900 Sobic001G196400--Sobic004G327000 Sobic001G196400--Sobic004G042800 Sobic001G196400--Sobic003G305500 Sobic010G026200 Sobic010G026200 Sobic001G196400--Sobic010G026200 Sobic001G196400--Sobic005G039000 Sobic003G305500--Sobic003G343000 Sobic003G305500--Sobic003G208900 Sobic003G305500--Sobic003G343300 Sobic006G059100 Sobic006G059100 Sobic003G305500--Sobic006G059100 Sobic008G134600 Sobic008G134600 Sobic003G305500--Sobic008G134600 Sobic009G062600 Sobic009G062600 Sobic003G305500--Sobic009G062600 Sobic008G124301 Sobic008G124301 Sobic003G305500--Sobic008G124301 Sobic003G445600 Sobic003G445600 Sobic003G305500--Sobic003G445600 Sobic003G305500--Sobic006G062100 Sobic003G317000--Sobic001G196400 Sobic003G317000--Sobic003G305500 Sobic003G317000--Sobic009G062600 Sobic003G317000--Sobic003G208900 Sobic001G002400 Sobic001G002400 Sobic003G317000--Sobic001G002400 Sobic003G317000--Sobic003G343000 Sobic006G164800 Sobic006G164800 Sobic003G317000--Sobic006G164800 Sobic003G317000--Sobic006G232700 Sobic003G317000--Sobic004G042800 Sobic005G220680 Sobic005G220680 Sobic001G155100--Sobic005G220680 Sobic001G155100--Sobic007G195000 Sobic001G155100--Sobic003G343300 Sobic001G155100--Sobic004G168150 Sobic001G155100--Sobic006G062100 Sobic001G188100 Sobic001G188100 Sobic001G155100--Sobic001G188100 Sobic003G243300 Sobic003G243300 Sobic001G155100--Sobic003G243300 Sobic001G155100--Sobic003G208900 Sobic004G160000 Sobic004G160000 Sobic001G155100--Sobic004G160000 Sobic010G157900 Sobic010G157900 Sobic004G168150--Sobic010G157900 Sobic004G168150--Sobic003G208900 Sobic004G168150--Sobic001G155100 Sobic004G168150--Sobic007G195000 Sobic004G168150--Sobic003G343300 Sobic002G223650 Sobic002G223650 Sobic004G168150--Sobic002G223650 Sobic003G274100 Sobic003G274100 Sobic004G168150--Sobic003G274100 Sobic004G168150--Sobic005G039000 Sobic004G168150--Sobic003G305500 Sobic007G185801--Sobic003G343000 Sobic007G185801--Sobic003G208900 Sobic007G185801--Sobic003G305500 Sobic007G185801--Sobic007G139300 Sobic007G185801--Sobic005G039000 Sobic006G176200 Sobic006G176200 Sobic007G185801--Sobic006G176200 Sobic007G185801--Sobic006G059100 Sobic009G259600 Sobic009G259600 Sobic007G185801--Sobic009G259600 Sobic001G473700 Sobic001G473700 Sobic007G185801--Sobic001G473700
Octagon: transcription factors


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