Gene annotation
Transcriptome id Sobic.003G317000.1
Synonym Sb03g036420
Functional annotation BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
UniProt C5XLP7
Pfam PF00651 PF03000
Panther DB PTHR32370 PTHR32370:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G03250 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os01g57230.1 : BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
MaizeGDB (Corn) Zm00025a008065 , Zm00025a009620 , Zm00025a016705 , Zm00025a027282 , Zm00025a020770
Brachypodium KQK13013 , PNT76347 , KQK10073 , KQK19264 , PNT61555 , KQK13304 , KQK21702 , PNT61948 , PNT61949 , PNT61947
Barley HORVU7Hr1G030460.4 , HORVU7Hr1G030460.5 , HORVU7Hr1G030460.6 , HORVU7Hr1G030460.7 , HORVU7Hr1G030460.1 , HORVU7Hr1G030460.2 , HORVU7Hr1G030460.3 , HORVU7Hr1G030460.8 , HORVU7Hr1G030460.9 , HORVU7Hr1G030460.12 , HORVU7Hr1G030460.13 , HORVU7Hr1G030460.10 , HORVU7Hr1G030460.11 , HORVU6Hr1G015480.2 , HORVU6Hr1G015480.3 , HORVU6Hr1G015480.1 , HORVU5Hr1G093880.2 , HORVU5Hr1G093880.1 , HORVU5Hr1G093850.4 , HORVU5Hr1G093850.5 , HORVU5Hr1G093850.6 , HORVU5Hr1G093850.7 , HORVU5Hr1G093850.1 , HORVU5Hr1G093850.2 , HORVU5Hr1G093850.3 , HORVU5Hr1G093850.8 , HORVU5Hr1G093850.9 , HORVU3Hr1G076740.2 , HORVU3Hr1G076740.1 , HORVU5Hr1G093850.16 , HORVU5Hr1G093850.14 , HORVU5Hr1G093850.15 , HORVU5Hr1G093850.12 , HORVU5Hr1G093850.13 , HORVU5Hr1G093850.10 , HORVU5Hr1G093850.11 , HORVU5Hr1G093850.19 , HORVU5Hr1G098170.6 , HORVU5Hr1G098170.4 , HORVU5Hr1G098170.5 , HORVU5Hr1G098170.2 , HORVU5Hr1G098170.1 , HORVU5Hr1G098170.9
Wheat TraesCS5A02G403400 , TraesCS1B02G298700 , TraesCS7D02G150700 , TraesCS2B02G557300 , TraesCS2B02G557300 , TraesCS7D02G150700 , TraesCS5D02G389200 , TraesCS5D02G389200 , TraesCS7A02G149100 , TraesCS2A02G526900 , TraesCS6B02G117400 , TraesCS5B02G383100 , TraesCS3A02G317300 , TraesCSU02G114000 , TraesCS2D02G529600 , TraesCS5D02G413400 , TraesCS2D02G507400 , TraesCS3D02G314000 , TraesCS6A02G085100 , TraesCS7A02G149100 , TraesCS7A02G149100 , TraesCS3B02G349200 , TraesCS5B02G408200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G196400 transmembrane and coiled-coil domain-containing protein 4, putative, expressed -
2 Sobic.003G305500 expressed protein -
3 Sobic.009G062600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase D, putative, expressed K01115: phospholipase D1/2
4 Sobic.003G208900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
5 Sobic.001G002400 OsSub55 - Putative Subtilisin homologue, expressed -
6 Sobic.003G343000 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
7 Sobic.006G164800 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
8 Sobic.006G232700 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
9 Sobic.004G042800 protein kinase domain containing protein, expressed -
10 Sobic.004G062300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
11 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
12 Sobic.002G049700 potassium channel AKT1, putative, expressed -
13 Sobic.002G034200 - -
14 Sobic.003G445600 KIP1, putative, expressed -
15 Sobic.007G102900 - -
16 Sobic.007G161100 ENTH domain containing protein, expressed -
17 Sobic.001G188100 expressed protein K15191: La-related protein 7
18 Sobic.007G185801 - -
19 Sobic.001G435300 C2 domain containing protein, expressed -
20 Sobic.001G409000 - -


Gene co-expression network
sample Sobic003G317000 Sobic003G317000 Sobic001G196400 Sobic001G196400 Sobic003G317000--Sobic001G196400 Sobic003G305500 Sobic003G305500 Sobic003G317000--Sobic003G305500 Sobic009G062600 Sobic009G062600 Sobic003G317000--Sobic009G062600 Sobic003G208900 Sobic003G208900 Sobic003G317000--Sobic003G208900 Sobic001G002400 Sobic001G002400 Sobic003G317000--Sobic001G002400 Sobic003G343000 Sobic003G343000 Sobic003G317000--Sobic003G343000 Sobic006G164800 Sobic006G164800 Sobic003G317000--Sobic006G164800 Sobic006G232700 Sobic006G232700 Sobic003G317000--Sobic006G232700 Sobic004G042800 Sobic004G042800 Sobic003G317000--Sobic004G042800 Sobic001G196400--Sobic003G317000 Sobic001G196400--Sobic006G232700 Sobic007G161100 Sobic007G161100 Sobic001G196400--Sobic007G161100 Sobic001G196400--Sobic003G208900 Sobic004G327000 Sobic004G327000 Sobic001G196400--Sobic004G327000 Sobic001G196400--Sobic004G042800 Sobic001G196400--Sobic003G305500 Sobic010G026200 Sobic010G026200 Sobic001G196400--Sobic010G026200 Sobic005G039000 Sobic005G039000 Sobic001G196400--Sobic005G039000 Sobic003G305500--Sobic003G343000 Sobic003G305500--Sobic003G208900 Sobic003G343300 Sobic003G343300 Sobic003G305500--Sobic003G343300 Sobic006G059100 Sobic006G059100 Sobic003G305500--Sobic006G059100 Sobic008G134600 Sobic008G134600 Sobic003G305500--Sobic008G134600 Sobic003G305500--Sobic009G062600 Sobic008G124301 Sobic008G124301 Sobic003G305500--Sobic008G124301 Sobic003G445600 Sobic003G445600 Sobic003G305500--Sobic003G445600 Sobic006G062100 Sobic006G062100 Sobic003G305500--Sobic006G062100 Sobic002G066600 Sobic002G066600 Sobic009G062600--Sobic002G066600 Sobic009G062600--Sobic001G002400 Sobic004G049300 Sobic004G049300 Sobic009G062600--Sobic004G049300 Sobic002G303500 Sobic002G303500 Sobic009G062600--Sobic002G303500 Sobic009G062600--Sobic006G164800 Sobic009G062600--Sobic003G305500 Sobic009G062600--Sobic003G445600 Sobic004G062300 Sobic004G062300 Sobic009G062600--Sobic004G062300 Sobic004G134600 Sobic004G134600 Sobic009G062600--Sobic004G134600 Sobic003G208900--Sobic003G305500 Sobic003G208900--Sobic005G039000 Sobic003G208900--Sobic003G343300 Sobic003G208900--Sobic003G343000 Sobic007G195000 Sobic007G195000 Sobic003G208900--Sobic007G195000 Sobic007G185801 Sobic007G185801 Sobic003G208900--Sobic007G185801 Sobic003G208900--Sobic004G042800 Sobic007G139300 Sobic007G139300 Sobic003G208900--Sobic007G139300 Sobic003G208900--Sobic006G062100 Sobic001G002400--Sobic009G062600 Sobic001G002400--Sobic004G062300 Sobic001G002400--Sobic006G164800 Sobic001G002400--Sobic002G066600 Sobic001G002400--Sobic004G049300 Sobic007G167000 Sobic007G167000 Sobic001G002400--Sobic007G167000 Sobic005G204500 Sobic005G204500 Sobic001G002400--Sobic005G204500 Sobic005G006300 Sobic005G006300 Sobic001G002400--Sobic005G006300 Sobic002G414150 Sobic002G414150 Sobic001G002400--Sobic002G414150 Sobic003G343000--Sobic003G305500 Sobic003G343000--Sobic008G134600 Sobic003G343000--Sobic008G124301 Sobic003G343000--Sobic003G343300 Sobic003G343000--Sobic006G059100 Sobic001G392650 Sobic001G392650 Sobic003G343000--Sobic001G392650 Sobic003G343000--Sobic003G445600 Sobic003G343000--Sobic006G062100 Sobic003G160600 Sobic003G160600 Sobic003G343000--Sobic003G160600 Sobic006G164800--Sobic004G062300 Sobic007G001800 Sobic007G001800 Sobic006G164800--Sobic007G001800 Sobic004G217200 Sobic004G217200 Sobic006G164800--Sobic004G217200 Sobic004G293300 Sobic004G293300 Sobic006G164800--Sobic004G293300 Sobic001G409000 Sobic001G409000 Sobic006G164800--Sobic001G409000 Sobic003G394801 Sobic003G394801 Sobic006G164800--Sobic003G394801 Sobic006G164800--Sobic007G167000 Sobic003G175600 Sobic003G175600 Sobic006G164800--Sobic003G175600 Sobic002G053800 Sobic002G053800 Sobic006G164800--Sobic002G053800 Sobic006G232700--Sobic001G196400 Sobic006G232700--Sobic003G317000 Sobic010G030500 Sobic010G030500 Sobic006G232700--Sobic010G030500 Sobic006G232700--Sobic003G208900 Sobic006G232700--Sobic004G042800 Sobic006G232700--Sobic003G305500 Sobic001G435300 Sobic001G435300 Sobic006G232700--Sobic001G435300 Sobic010G074000 Sobic010G074000 Sobic006G232700--Sobic010G074000 Sobic002G298201 Sobic002G298201 Sobic006G232700--Sobic002G298201 Sobic004G042800--Sobic003G208900 Sobic004G042800--Sobic003G305500 Sobic004G042800--Sobic001G435300 Sobic001G188100 Sobic001G188100 Sobic004G042800--Sobic001G188100 Sobic002G049700 Sobic002G049700 Sobic004G042800--Sobic002G049700 Sobic004G042800--Sobic003G343000 Sobic004G160000 Sobic004G160000 Sobic004G042800--Sobic004G160000 Sobic004G042800--Sobic001G392650 Sobic004G042800--Sobic007G139300
Octagon: transcription factors


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