Gene annotation
Transcriptome id Sobic.009G062600.1
Synonym Sb09g005220, PLD, PLDALPHA1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phospholipase D, putative, expressed
UniProt A0A1Z5R170
Pfam PF00168 PF00614 PF12357
Panther DB PTHR18896 PTHR18896:SF67
NCBI CDD -
KEGG Orthology K01115; phospholipase D1/2
Gene Ontology GO:0005515; protein binding GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G15730 : phospholipase D alpha 1
RAP-DB (Rice) LOC_Os05g07880.1 : phospholipase D, putative, expressed
MaizeGDB (Corn) Zm00025a051292 , Zm00025a043052 , Zm00025a013932 , Zm00025a052107 , Zm00025a002737
Brachypodium KQK21427 , KQK17763 , KQK07277 , KQK07276 , KQK21428
Barley HORVU7Hr1G089960.4 , HORVU7Hr1G089960.1 , HORVU7Hr1G089960.3 , HORVU1Hr1G025370.4 , HORVU1Hr1G025370.1 , HORVU1Hr1G025370.2 , HORVU1Hr1G025370.3 , HORVU0Hr1G009480.1 , HORVU0Hr1G009480.3 , HORVU0Hr1G009480.2 , HORVU0Hr1G009480.5 , HORVU0Hr1G009480.4 , HORVU0Hr1G009480.7 , HORVU0Hr1G009480.6 , HORVU0Hr1G009480.9 , HORVU0Hr1G009480.8 , HORVU1Hr1G082940.1 , HORVU1Hr1G082940.2 , HORVU1Hr1G082940.3 , HORVU1Hr1G082950.13 , HORVU1Hr1G082950.12 , HORVU1Hr1G082950.10 , HORVU1Hr1G082950.11 , HORVU5Hr1G064520.6 , HORVU5Hr1G064520.7 , HORVU5Hr1G064520.4 , HORVU5Hr1G064520.5 , HORVU5Hr1G064520.2 , HORVU5Hr1G064520.3 , HORVU5Hr1G064520.1 , HORVU5Hr1G064520.8 , HORVU7Hr1G089960.5 , HORVU1Hr1G082950.9 , HORVU1Hr1G082950.8 , HORVU1Hr1G082950.3 , HORVU1Hr1G082950.2 , HORVU1Hr1G082950.1 , HORVU1Hr1G082950.7 , HORVU1Hr1G082950.6 , HORVU1Hr1G082950.5 , HORVU1Hr1G082950.4 , HORVU1Hr1G082890.6 , HORVU1Hr1G082890.4 , HORVU1Hr1G082890.5 , HORVU1Hr1G082890.2 , HORVU1Hr1G082890.3
Wheat TraesCS4B02G352300 , TraesCS4B02G352300 , TraesCS7A02G545000 , TraesCS5A02G520900 , TraesCS1A02G373100 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS7D02G531300 , TraesCS5D02G231100 , TraesCS7B02G468200 , TraesCS4B02G377600 , TraesCS1B02G050400 , TraesCS1B02G135200 , TraesCS1B02G135200 , TraesCS4D02G346700 , TraesCSU02G145400 , TraesCSU02G145400 , TraesCS1D02G116700 , TraesCS7B02G468300 , TraesCS5B02G222500 , TraesCS1D02G035800 , TraesCS1D02G035800 , TraesCS1A02G115300 , TraesCS7D02G531200 , TraesCS1A02G373100 , TraesCS1A02G373100 , TraesCS1A02G373100 , TraesCS5A02G223500 , TraesCS1D02G379900 , TraesCS1D02G379900 , TraesCS1D02G379900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G066600 - -
2 Sobic.001G002400 OsSub55 - Putative Subtilisin homologue, expressed -
3 Sobic.004G049300 transporter family protein, putative, expressed -
4 Sobic.002G303500 actin-depolymerizing factor, putative, expressed K05765: cofilin
5 Sobic.006G164800 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
6 Sobic.003G305500 expressed protein -
7 Sobic.003G445600 KIP1, putative, expressed -
8 Sobic.004G062300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
9 Sobic.004G134600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
10 Sobic.001G037066 - -
11 Sobic.004G242600 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.006G282000 cytochrome c, putative, expressed K08738: cytochrome c
13 Sobic.007G112400 polygalacturonase, putative, expressed -
14 Sobic.009G091600 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
15 Sobic.002G066300 expressed protein -
16 Sobic.008G119501 - -
17 Sobic.008G027900 pollen allergen, putative, expressed -
18 Sobic.005G023700 pollen allergen Cyn d 23, putative, expressed -
19 Sobic.002G140500 POEI23 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
20 Sobic.001G097000 WD-40 repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic009G062600 Sobic009G062600 Sobic002G066600 Sobic002G066600 Sobic009G062600--Sobic002G066600 Sobic001G002400 Sobic001G002400 Sobic009G062600--Sobic001G002400 Sobic004G049300 Sobic004G049300 Sobic009G062600--Sobic004G049300 Sobic002G303500 Sobic002G303500 Sobic009G062600--Sobic002G303500 Sobic006G164800 Sobic006G164800 Sobic009G062600--Sobic006G164800 Sobic003G305500 Sobic003G305500 Sobic009G062600--Sobic003G305500 Sobic003G445600 Sobic003G445600 Sobic009G062600--Sobic003G445600 Sobic004G062300 Sobic004G062300 Sobic009G062600--Sobic004G062300 Sobic004G134600 Sobic004G134600 Sobic009G062600--Sobic004G134600 Sobic002G066600--Sobic004G049300 Sobic008G028000 Sobic008G028000 Sobic002G066600--Sobic008G028000 Sobic008G027900 Sobic008G027900 Sobic002G066600--Sobic008G027900 Sobic010G006900 Sobic010G006900 Sobic002G066600--Sobic010G006900 Sobic005G023700 Sobic005G023700 Sobic002G066600--Sobic005G023700 Sobic006G263500 Sobic006G263500 Sobic002G066600--Sobic006G263500 Sobic006G159000 Sobic006G159000 Sobic002G066600--Sobic006G159000 Sobic009G091600 Sobic009G091600 Sobic002G066600--Sobic009G091600 Sobic005G025600 Sobic005G025600 Sobic002G066600--Sobic005G025600 Sobic001G002400--Sobic009G062600 Sobic001G002400--Sobic004G062300 Sobic001G002400--Sobic006G164800 Sobic001G002400--Sobic002G066600 Sobic001G002400--Sobic004G049300 Sobic007G167000 Sobic007G167000 Sobic001G002400--Sobic007G167000 Sobic005G204500 Sobic005G204500 Sobic001G002400--Sobic005G204500 Sobic005G006300 Sobic005G006300 Sobic001G002400--Sobic005G006300 Sobic002G414150 Sobic002G414150 Sobic001G002400--Sobic002G414150 Sobic004G217200 Sobic004G217200 Sobic004G049300--Sobic004G217200 Sobic004G049300--Sobic005G204500 Sobic006G195000 Sobic006G195000 Sobic004G049300--Sobic006G195000 Sobic004G049300--Sobic005G006300 Sobic006G142200 Sobic006G142200 Sobic004G049300--Sobic006G142200 Sobic003G394801 Sobic003G394801 Sobic004G049300--Sobic003G394801 Sobic009G016900 Sobic009G016900 Sobic004G049300--Sobic009G016900 Sobic005G110120 Sobic005G110120 Sobic004G049300--Sobic005G110120 Sobic004G049300--Sobic002G303500 Sobic006G282000 Sobic006G282000 Sobic002G303500--Sobic006G282000 Sobic008G119501 Sobic008G119501 Sobic002G303500--Sobic008G119501 Sobic001G097000 Sobic001G097000 Sobic002G303500--Sobic001G097000 Sobic002G066300 Sobic002G066300 Sobic002G303500--Sobic002G066300 Sobic004G242600 Sobic004G242600 Sobic002G303500--Sobic004G242600 Sobic001G024800 Sobic001G024800 Sobic002G303500--Sobic001G024800 Sobic002G303500--Sobic005G023700 Sobic003G400000 Sobic003G400000 Sobic002G303500--Sobic003G400000 Sobic002G303500--Sobic009G091600 Sobic006G164800--Sobic004G062300 Sobic007G001800 Sobic007G001800 Sobic006G164800--Sobic007G001800 Sobic006G164800--Sobic004G217200 Sobic004G293300 Sobic004G293300 Sobic006G164800--Sobic004G293300 Sobic001G409000 Sobic001G409000 Sobic006G164800--Sobic001G409000 Sobic006G164800--Sobic003G394801 Sobic006G164800--Sobic007G167000 Sobic003G175600 Sobic003G175600 Sobic006G164800--Sobic003G175600 Sobic002G053800 Sobic002G053800 Sobic006G164800--Sobic002G053800 Sobic003G343000 Sobic003G343000 Sobic003G305500--Sobic003G343000 Sobic003G208900 Sobic003G208900 Sobic003G305500--Sobic003G208900 Sobic003G343300 Sobic003G343300 Sobic003G305500--Sobic003G343300 Sobic006G059100 Sobic006G059100 Sobic003G305500--Sobic006G059100 Sobic008G134600 Sobic008G134600 Sobic003G305500--Sobic008G134600 Sobic003G305500--Sobic009G062600 Sobic008G124301 Sobic008G124301 Sobic003G305500--Sobic008G124301 Sobic003G305500--Sobic003G445600 Sobic006G062100 Sobic006G062100 Sobic003G305500--Sobic006G062100 Sobic003G445600--Sobic002G303500 Sobic003G445600--Sobic009G016900 Sobic003G445600--Sobic006G282000 Sobic003G445600--Sobic001G097000 Sobic010G229801 Sobic010G229801 Sobic003G445600--Sobic010G229801 Sobic003G317600 Sobic003G317600 Sobic003G445600--Sobic003G317600 Sobic003G445600--Sobic004G242600 Sobic007G175800 Sobic007G175800 Sobic003G445600--Sobic007G175800 Sobic003G445600--Sobic004G134600 Sobic004G062300--Sobic006G164800 Sobic004G062300--Sobic007G167000 Sobic004G062300--Sobic007G001800 Sobic001G269600 Sobic001G269600 Sobic004G062300--Sobic001G269600 Sobic004G062300--Sobic004G217200 Sobic001G269700 Sobic001G269700 Sobic004G062300--Sobic001G269700 Sobic001G269200 Sobic001G269200 Sobic004G062300--Sobic001G269200 Sobic002G414300 Sobic002G414300 Sobic004G062300--Sobic002G414300 Sobic010G107800 Sobic010G107800 Sobic004G062300--Sobic010G107800 Sobic004G029032 Sobic004G029032 Sobic004G134600--Sobic004G029032 Sobic004G134600--Sobic001G024800 Sobic004G134600--Sobic003G400000 Sobic002G150400 Sobic002G150400 Sobic004G134600--Sobic002G150400 Sobic006G171500 Sobic006G171500 Sobic004G134600--Sobic006G171500 Sobic004G134600--Sobic009G091600 Sobic004G134600--Sobic008G027900 Sobic004G134600--Sobic006G263500 Sobic002G140500 Sobic002G140500 Sobic004G134600--Sobic002G140500
Octagon: transcription factors


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