Gene annotation
Transcriptome id Sobic.010G026200.1,Sobic.010G026200.2,Sobic.010G026200.3
Synonym Sb10g002411, KEU
Functional annotation Sec1 family transport protein, putative, expressed
UniProt A0A1W0VR63 , A0A1W0VR65 , A0A194YH00
Pfam PF00995
Panther DB PTHR11679 PTHR11679:SF38
NCBI CDD -
KEGG Orthology K15292; STXBP1, syntaxin-binding protein 1
Gene Ontology GO:0016192; vesicle-mediated transport GO:0006904vesicle docking involved in exocytosis


Orthologs (automatic annotation)
TAIR AT1G12360 : Sec1/munc18-like (SM) proteins superfamily
RAP-DB (Rice) LOC_Os06g04450.2 : Sec1 family transport protein, putative, expressed
MaizeGDB (Corn) Zm00025a050117
Brachypodium PNT76684 , KQK19966
Barley HORVU3Hr1G117280.1 , HORVU3Hr1G117280.2 , HORVU3Hr1G117280.3 , HORVU3Hr1G117280.4 , HORVU3Hr1G117280.5 , HORVU3Hr1G117280.6
Wheat TraesCS3D02G542100 , TraesCS3A02G538700 , TraesCS3B02G607200 , TraesCS2A02G061000 , TraesCS2A02G061000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G160000 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.006G018701 - -
3 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
4 Sobic.004G059200 inactive receptor kinase At2g26730 precursor, putative, expressed -
5 Sobic.003G343300 - -
6 Sobic.003G343000 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
7 Sobic.002G406801 - -
8 Sobic.007G195000 cystathionin beta synthase protein, putative, expressed -
9 Sobic.001G392650 - -
10 Sobic.003G160600 uncharacterized protein At4g06744 precursor, putative, expressed -
11 Sobic.005G039000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
12 Sobic.003G305500 expressed protein -
13 Sobic.007G161100 ENTH domain containing protein, expressed -
14 Sobic.002G049700 potassium channel AKT1, putative, expressed -
15 Sobic.003G208900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
16 Sobic.002G021500 OsFBX209 - F-box domain containing protein, expressed -
17 Sobic.002G330200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
18 Sobic.009G158300 - -
19 Sobic.008G134600 - -
20 Sobic.004G042800 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic010G026200 Sobic010G026200 Sobic004G160000 Sobic004G160000 Sobic010G026200--Sobic004G160000 Sobic006G018701 Sobic006G018701 Sobic010G026200--Sobic006G018701 Sobic004G327000 Sobic004G327000 Sobic010G026200--Sobic004G327000 Sobic004G059200 Sobic004G059200 Sobic010G026200--Sobic004G059200 Sobic003G343300 Sobic003G343300 Sobic010G026200--Sobic003G343300 Sobic003G343000 Sobic003G343000 Sobic010G026200--Sobic003G343000 Sobic002G406801 Sobic002G406801 Sobic010G026200--Sobic002G406801 Sobic007G195000 Sobic007G195000 Sobic010G026200--Sobic007G195000 Sobic001G392650 Sobic001G392650 Sobic010G026200--Sobic001G392650 Sobic004G160000--Sobic004G327000 Sobic001G188100 Sobic001G188100 Sobic004G160000--Sobic001G188100 Sobic004G160000--Sobic010G026200 Sobic004G160000--Sobic006G018701 Sobic004G160000--Sobic003G343300 Sobic004G160000--Sobic007G195000 Sobic002G049700 Sobic002G049700 Sobic004G160000--Sobic002G049700 Sobic003G160600 Sobic003G160600 Sobic004G160000--Sobic003G160600 Sobic009G158300 Sobic009G158300 Sobic004G160000--Sobic009G158300 Sobic006G018701--Sobic009G158300 Sobic006G018701--Sobic003G160600 Sobic006G018701--Sobic001G392650 Sobic006G018701--Sobic002G049700 Sobic006G018701--Sobic003G343000 Sobic006G018701--Sobic002G406801 Sobic006G018701--Sobic004G327000 Sobic009G060000 Sobic009G060000 Sobic006G018701--Sobic009G060000 Sobic006G018701--Sobic003G343300 Sobic004G327000--Sobic006G018701 Sobic007G161100 Sobic007G161100 Sobic004G327000--Sobic007G161100 Sobic004G327000--Sobic004G160000 Sobic004G327000--Sobic007G195000 Sobic004G327000--Sobic003G160600 Sobic004G327000--Sobic003G343300 Sobic004G327000--Sobic010G026200 Sobic004G327000--Sobic009G158300 Sobic004G327000--Sobic001G188100 Sobic004G059200--Sobic007G161100 Sobic004G059200--Sobic010G026200 Sobic004G059200--Sobic004G327000 Sobic004G059200--Sobic004G160000 Sobic004G059200--Sobic006G018701 Sobic004G059200--Sobic002G406801 Sobic006G066050 Sobic006G066050 Sobic004G059200--Sobic006G066050 Sobic009G103650 Sobic009G103650 Sobic004G059200--Sobic009G103650 Sobic009G021000 Sobic009G021000 Sobic004G059200--Sobic009G021000 Sobic003G343300--Sobic007G195000 Sobic006G062100 Sobic006G062100 Sobic003G343300--Sobic006G062100 Sobic003G343300--Sobic003G343000 Sobic008G134600 Sobic008G134600 Sobic003G343300--Sobic008G134600 Sobic007G139300 Sobic007G139300 Sobic003G343300--Sobic007G139300 Sobic003G305500 Sobic003G305500 Sobic003G343300--Sobic003G305500 Sobic008G124301 Sobic008G124301 Sobic003G343300--Sobic008G124301 Sobic003G343300--Sobic001G392650 Sobic003G343300--Sobic003G160600 Sobic003G343000--Sobic003G305500 Sobic003G343000--Sobic008G134600 Sobic003G343000--Sobic008G124301 Sobic003G343000--Sobic003G343300 Sobic006G059100 Sobic006G059100 Sobic003G343000--Sobic006G059100 Sobic003G343000--Sobic001G392650 Sobic003G445600 Sobic003G445600 Sobic003G343000--Sobic003G445600 Sobic003G343000--Sobic006G062100 Sobic003G343000--Sobic003G160600 Sobic002G406801--Sobic006G018701 Sobic002G406801--Sobic001G392650 Sobic002G330200 Sobic002G330200 Sobic002G406801--Sobic002G330200 Sobic002G021500 Sobic002G021500 Sobic002G406801--Sobic002G021500 Sobic002G406801--Sobic009G158300 Sobic002G406801--Sobic002G049700 Sobic002G406801--Sobic003G160600 Sobic002G406801--Sobic009G060000 Sobic002G406801--Sobic010G026200 Sobic007G195000--Sobic003G343300 Sobic007G195000--Sobic006G062100 Sobic007G195000--Sobic003G160600 Sobic005G039000 Sobic005G039000 Sobic007G195000--Sobic005G039000 Sobic007G195000--Sobic003G343000 Sobic007G195000--Sobic003G305500 Sobic007G195000--Sobic004G327000 Sobic007G195000--Sobic007G139300 Sobic007G195000--Sobic008G134600 Sobic001G392650--Sobic002G049700 Sobic001G392650--Sobic008G134600 Sobic001G392650--Sobic002G330200 Sobic001G392650--Sobic009G158300 Sobic001G392650--Sobic003G343000 Sobic001G392650--Sobic008G124301 Sobic001G109900 Sobic001G109900 Sobic001G392650--Sobic001G109900 Sobic001G392650--Sobic009G060000 Sobic001G392650--Sobic007G139300
Octagon: transcription factors


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