Gene annotation
Transcriptome id Sobic.001G386900.1,Sobic.001G386900.2
Synonym Sb01g036690
Functional annotation pyruvate kinase, putative, expressed
UniProt A0A1B6QQ11 , C5X1R1
Pfam PF02887 PF00224
Panther DB PTHR11817 PTHR11817:SF30
NCBI CDD -
KEGG Orthology K00873; PK, pyruvate kinase
Gene Ontology GO:0006096; glycolytic process GO:0004743pyruvate kinase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G56350 : Pyruvate kinase family protein
RAP-DB (Rice) LOC_Os01g16960.1 : pyruvate kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK21884 , KQK03897
Barley -
Wheat TraesCS3D02G192800 , TraesCS3A02G189300 , TraesCS4B02G174700 , TraesCS4D02G176600 , TraesCS3B02G218500 , TraesCS3B02G218500 , TraesCS4A02G129900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G070100 OsFBX230 - F-box domain containing protein, expressed -
2 Sobic.001G435300 C2 domain containing protein, expressed -
3 Sobic.004G050900 OsFBX248 - F-box domain containing protein, expressed -
4 Sobic.009G182100 cysteine proteinase inhibitor precursor protein, putative, expressed -
5 Sobic.005G000900 OsFBX103 - F-box domain containing protein, expressed -
6 Sobic.007G031200 - -
7 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
8 Sobic.002G384900 expressed protein -
9 Sobic.006G017700 expressed protein -
10 Sobic.009G047100 GEX1, putative, expressed -
11 Sobic.009G110600 OsFBX422 - F-box domain containing protein, expressed -
12 Sobic.002G182701 - -
13 Sobic.008G138400 expressed protein -
14 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
15 Sobic.006G017900 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
16 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.004G100300 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.003G133201 - -
19 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
20 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11


Gene co-expression network
sample Sobic001G386900 Sobic001G386900 Sobic002G070100 Sobic002G070100 Sobic001G386900--Sobic002G070100 Sobic001G435300 Sobic001G435300 Sobic001G386900--Sobic001G435300 Sobic004G050900 Sobic004G050900 Sobic001G386900--Sobic004G050900 Sobic009G182100 Sobic009G182100 Sobic001G386900--Sobic009G182100 Sobic005G000900 Sobic005G000900 Sobic001G386900--Sobic005G000900 Sobic007G031200 Sobic007G031200 Sobic001G386900--Sobic007G031200 Sobic002G156400 Sobic002G156400 Sobic001G386900--Sobic002G156400 Sobic002G384900 Sobic002G384900 Sobic001G386900--Sobic002G384900 Sobic006G017700 Sobic006G017700 Sobic001G386900--Sobic006G017700 Sobic002G070100--Sobic006G017700 Sobic002G070100--Sobic002G384900 Sobic002G182701 Sobic002G182701 Sobic002G070100--Sobic002G182701 Sobic006G017900 Sobic006G017900 Sobic002G070100--Sobic006G017900 Sobic002G070100--Sobic005G000900 Sobic001G211700 Sobic001G211700 Sobic002G070100--Sobic001G211700 Sobic005G140900 Sobic005G140900 Sobic002G070100--Sobic005G140900 Sobic002G070100--Sobic002G156400 Sobic008G138400 Sobic008G138400 Sobic002G070100--Sobic008G138400 Sobic008G169101 Sobic008G169101 Sobic001G435300--Sobic008G169101 Sobic002G402900 Sobic002G402900 Sobic001G435300--Sobic002G402900 Sobic005G058600 Sobic005G058600 Sobic001G435300--Sobic005G058600 Sobic004G042800 Sobic004G042800 Sobic001G435300--Sobic004G042800 Sobic001G392650 Sobic001G392650 Sobic001G435300--Sobic001G392650 Sobic009G110700 Sobic009G110700 Sobic001G435300--Sobic009G110700 Sobic002G049700 Sobic002G049700 Sobic001G435300--Sobic002G049700 Sobic001G366700 Sobic001G366700 Sobic001G435300--Sobic001G366700 Sobic005G191300 Sobic005G191300 Sobic001G435300--Sobic005G191300 Sobic004G050900--Sobic005G000900 Sobic009G047100 Sobic009G047100 Sobic004G050900--Sobic009G047100 Sobic004G050900--Sobic005G140900 Sobic004G050900--Sobic002G156400 Sobic004G050900--Sobic009G182100 Sobic004G050900--Sobic006G017700 Sobic004G050900--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic004G050900--Sobic002G097300 Sobic008G024200 Sobic008G024200 Sobic004G050900--Sobic008G024200 Sobic009G182100--Sobic002G182701 Sobic009G182100--Sobic006G017700 Sobic009G182100--Sobic005G000900 Sobic009G182100--Sobic006G017900 Sobic009G182100--Sobic002G156400 Sobic009G182100--Sobic001G211700 Sobic009G182100--Sobic005G140900 Sobic009G182100--Sobic002G384900 Sobic009G182100--Sobic008G138400 Sobic005G000900--Sobic006G017700 Sobic005G000900--Sobic002G182701 Sobic005G000900--Sobic006G017900 Sobic005G000900--Sobic002G156400 Sobic005G000900--Sobic002G384900 Sobic005G000900--Sobic001G211700 Sobic005G000900--Sobic009G182100 Sobic005G000900--Sobic005G140900 Sobic004G100300 Sobic004G100300 Sobic005G000900--Sobic004G100300 Sobic003G191200 Sobic003G191200 Sobic007G031200--Sobic003G191200 Sobic007G031200--Sobic004G100300 Sobic007G031200--Sobic002G182701 Sobic007G031200--Sobic005G000900 Sobic007G082100 Sobic007G082100 Sobic007G031200--Sobic007G082100 Sobic007G031200--Sobic009G182100 Sobic007G031200--Sobic006G017900 Sobic007G031200--Sobic001G211700 Sobic007G031200--Sobic006G017700 Sobic002G156400--Sobic008G138400 Sobic002G156400--Sobic005G140900 Sobic002G156400--Sobic002G097300 Sobic005G189100 Sobic005G189100 Sobic002G156400--Sobic005G189100 Sobic001G089300 Sobic001G089300 Sobic002G156400--Sobic001G089300 Sobic009G234900 Sobic009G234900 Sobic002G156400--Sobic009G234900 Sobic002G006200 Sobic002G006200 Sobic002G156400--Sobic002G006200 Sobic010G121700 Sobic010G121700 Sobic002G156400--Sobic010G121700 Sobic008G036100 Sobic008G036100 Sobic002G156400--Sobic008G036100 Sobic002G384900--Sobic006G017900 Sobic002G384900--Sobic006G017700 Sobic002G384900--Sobic002G182701 Sobic002G384900--Sobic004G100300 Sobic002G384900--Sobic001G211700 Sobic005G221675 Sobic005G221675 Sobic002G384900--Sobic005G221675 Sobic002G384900--Sobic005G000900 Sobic002G384900--Sobic002G156400 Sobic002G384900--Sobic009G182100 Sobic006G017700--Sobic002G182701 Sobic006G017700--Sobic006G017900 Sobic006G017700--Sobic001G211700 Sobic006G017700--Sobic002G384900 Sobic006G017700--Sobic005G000900 Sobic006G017700--Sobic005G140900 Sobic006G017700--Sobic002G156400 Sobic006G017700--Sobic009G182100 Sobic006G017700--Sobic008G138400
Octagon: transcription factors


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