Gene annotation
Transcriptome id Sobic.004G348000.1
Synonym Sb04g037470
Functional annotation white-brown complex homolog protein, putative, expressed
UniProt A0A194YT77
Pfam PF00005
Panther DB PTHR19241 PTHR19241:SF254
NCBI CDD KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein)
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G60740 : ABC transporter family protein
RAP-DB (Rice) LOC_Os11g22350.1 : white-brown complex homolog protein, putative, expressed
MaizeGDB (Corn) Zm00025a050863 , Zm00025a022624
Brachypodium KQK01397
Barley HORVU6Hr1G091510.16 , HORVU6Hr1G091510.17 , HORVU6Hr1G091510.14 , HORVU6Hr1G091510.15 , HORVU6Hr1G091510.12 , HORVU6Hr1G091510.13 , HORVU6Hr1G091510.10 , HORVU6Hr1G091510.11 , HORVU6Hr1G091510.18 , HORVU6Hr1G091510.4 , HORVU6Hr1G091510.5 , HORVU6Hr1G091510.6 , HORVU6Hr1G091510.7 , HORVU6Hr1G091510.1 , HORVU6Hr1G091510.2 , HORVU6Hr1G091510.8 , HORVU6Hr1G091510.9 , HORVU6Hr1G091510.3
Wheat TraesCS6A02G395000 , TraesCSU02G106900 , TraesCS6D02G380300 , TraesCS6A02G395000 , TraesCS6B02G434900 , TraesCS7B02G488900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G059200 inactive receptor kinase At2g26730 precursor, putative, expressed -
2 Sobic.001G251000 - -
3 Sobic.009G125100 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
4 Sobic.004G060400 ANTH/ENTH domain containing protein, putative, expressed -
5 Sobic.007G161100 ENTH domain containing protein, expressed -
6 Sobic.009G176200 expressed protein -
7 Sobic.005G200100 - -
8 Sobic.005G039000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
9 Sobic.001G196400 transmembrane and coiled-coil domain-containing protein 4, putative, expressed -
10 Sobic.010G217700 clathrin assembly protein, putative, expressed -
11 Sobic.004G031900 phosphatidylinositol transfer, putative, expressed -
12 Sobic.010G082300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
13 Sobic.010G026200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
14 Sobic.003G066300 expressed protein -
15 Sobic.003G302532 - -
16 Sobic.003G208900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
17 Sobic.009G249400 protein kinase family protein, putative, expressed -
18 Sobic.009G042800 expressed protein -
19 Sobic.009G021000 exocyst complex component 6, putative, expressed -
20 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39


Gene co-expression network
sample Sobic004G348000 Sobic004G348000 Sobic004G059200 Sobic004G059200 Sobic004G348000--Sobic004G059200 Sobic001G251000 Sobic001G251000 Sobic004G348000--Sobic001G251000 Sobic009G125100 Sobic009G125100 Sobic004G348000--Sobic009G125100 Sobic004G060400 Sobic004G060400 Sobic004G348000--Sobic004G060400 Sobic007G161100 Sobic007G161100 Sobic004G348000--Sobic007G161100 Sobic009G176200 Sobic009G176200 Sobic004G348000--Sobic009G176200 Sobic005G200100 Sobic005G200100 Sobic004G348000--Sobic005G200100 Sobic005G039000 Sobic005G039000 Sobic004G348000--Sobic005G039000 Sobic001G196400 Sobic001G196400 Sobic004G348000--Sobic001G196400 Sobic004G059200--Sobic007G161100 Sobic010G026200 Sobic010G026200 Sobic004G059200--Sobic010G026200 Sobic004G327000 Sobic004G327000 Sobic004G059200--Sobic004G327000 Sobic004G160000 Sobic004G160000 Sobic004G059200--Sobic004G160000 Sobic006G018701 Sobic006G018701 Sobic004G059200--Sobic006G018701 Sobic002G406801 Sobic002G406801 Sobic004G059200--Sobic002G406801 Sobic006G066050 Sobic006G066050 Sobic004G059200--Sobic006G066050 Sobic009G103650 Sobic009G103650 Sobic004G059200--Sobic009G103650 Sobic009G021000 Sobic009G021000 Sobic004G059200--Sobic009G021000 Sobic001G251000--Sobic005G200100 Sobic001G251000--Sobic004G348000 Sobic003G302532 Sobic003G302532 Sobic001G251000--Sobic003G302532 Sobic001G252151 Sobic001G252151 Sobic001G251000--Sobic001G252151 Sobic001G251000--Sobic004G059200 Sobic001G251000--Sobic009G125100 Sobic004G252850 Sobic004G252850 Sobic001G251000--Sobic004G252850 Sobic001G251000--Sobic010G026200 Sobic003G406060 Sobic003G406060 Sobic001G251000--Sobic003G406060 Sobic009G042800 Sobic009G042800 Sobic009G125100--Sobic009G042800 Sobic009G125100--Sobic004G059200 Sobic009G125100--Sobic009G021000 Sobic009G125100--Sobic004G348000 Sobic009G125100--Sobic006G066050 Sobic002G087600 Sobic002G087600 Sobic009G125100--Sobic002G087600 Sobic009G125100--Sobic007G161100 Sobic001G272100 Sobic001G272100 Sobic009G125100--Sobic001G272100 Sobic002G015200 Sobic002G015200 Sobic009G125100--Sobic002G015200 Sobic004G060400--Sobic004G348000 Sobic010G074000 Sobic010G074000 Sobic004G060400--Sobic010G074000 Sobic004G031900 Sobic004G031900 Sobic004G060400--Sobic004G031900 Sobic004G060400--Sobic009G176200 Sobic009G249400 Sobic009G249400 Sobic004G060400--Sobic009G249400 Sobic003G254200 Sobic003G254200 Sobic004G060400--Sobic003G254200 Sobic004G060400--Sobic007G161100 Sobic004G288000 Sobic004G288000 Sobic004G060400--Sobic004G288000 Sobic004G060400--Sobic001G196400 Sobic007G161100--Sobic004G327000 Sobic007G161100--Sobic004G059200 Sobic007G161100--Sobic006G018701 Sobic007G161100--Sobic010G026200 Sobic007G161100--Sobic005G039000 Sobic007G161100--Sobic001G196400 Sobic007G161100--Sobic004G160000 Sobic003G208900 Sobic003G208900 Sobic007G161100--Sobic003G208900 Sobic007G161100--Sobic002G406801 Sobic003G211000 Sobic003G211000 Sobic009G176200--Sobic003G211000 Sobic010G187800 Sobic010G187800 Sobic009G176200--Sobic010G187800 Sobic009G176200--Sobic004G031900 Sobic001G380000 Sobic001G380000 Sobic009G176200--Sobic001G380000 Sobic009G176200--Sobic009G249400 Sobic003G061600 Sobic003G061600 Sobic009G176200--Sobic003G061600 Sobic003G233800 Sobic003G233800 Sobic009G176200--Sobic003G233800 Sobic009G176200--Sobic005G039000 Sobic004G185000 Sobic004G185000 Sobic009G176200--Sobic004G185000 Sobic005G200100--Sobic001G251000 Sobic005G200100--Sobic003G406060 Sobic005G200100--Sobic003G302532 Sobic005G200100--Sobic004G348000 Sobic005G200100--Sobic001G252151 Sobic010G014850 Sobic010G014850 Sobic005G200100--Sobic010G014850 Sobic005G191200 Sobic005G191200 Sobic005G200100--Sobic005G191200 Sobic010G158050 Sobic010G158050 Sobic005G200100--Sobic010G158050 Sobic005G200100--Sobic004G059200 Sobic003G343300 Sobic003G343300 Sobic005G039000--Sobic003G343300 Sobic005G039000--Sobic003G208900 Sobic007G195000 Sobic007G195000 Sobic005G039000--Sobic007G195000 Sobic003G343000 Sobic003G343000 Sobic005G039000--Sobic003G343000 Sobic007G139300 Sobic007G139300 Sobic005G039000--Sobic007G139300 Sobic007G185801 Sobic007G185801 Sobic005G039000--Sobic007G185801 Sobic006G062100 Sobic006G062100 Sobic005G039000--Sobic006G062100 Sobic005G039000--Sobic006G018701 Sobic005G039000--Sobic004G327000 Sobic003G317000 Sobic003G317000 Sobic001G196400--Sobic003G317000 Sobic006G232700 Sobic006G232700 Sobic001G196400--Sobic006G232700 Sobic001G196400--Sobic007G161100 Sobic001G196400--Sobic003G208900 Sobic001G196400--Sobic004G327000 Sobic004G042800 Sobic004G042800 Sobic001G196400--Sobic004G042800 Sobic003G305500 Sobic003G305500 Sobic001G196400--Sobic003G305500 Sobic001G196400--Sobic010G026200 Sobic001G196400--Sobic005G039000
Octagon: transcription factors


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