Gene annotation
Transcriptome id Sobic.005G106700.12,Sobic.005G106700.2,Sobic.005G106700.14,Sobic.005G106700.3,Sobic.005G106700.11,Sobic.005G106700.1,Sobic.005G106700.5,Sobic.005G106700.9,Sobic.005G106700.8,Sobic.005G106700.6,Sobic.005G106700.7,Sobic.005G106700.4,Sobic.005G106700.13,Sobic.005G106700.10
Synonym Sb05g010010, SEC3A
Functional annotation roothairless 1, putative, expressed
UniProt A0A1Z5RI18 , A0A1Z5RHU7 , A0A1Z5RHQ9 , A0A1Z5RHS5 , A0A1Z5RIQ7
Pfam PF09763 PF15277 PF09763
Panther DB PTHR16092 PTHR16092:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47550 : exocyst complex component sec3A
RAP-DB (Rice) LOC_Os11g17600.2,LOC_Os11g17600.3,LOC_Os11g17600.1 : roothairless 1, putative, expressed
MaizeGDB (Corn) Zm00025a029608
Brachypodium PNT63724 , PNT63722 , PNT63723 , KQJ88665
Barley HORVU4Hr1G014220.22 , HORVU4Hr1G014220.23 , HORVU4Hr1G014220.20 , HORVU4Hr1G014220.26 , HORVU4Hr1G014220.27 , HORVU4Hr1G014220.24 , HORVU4Hr1G014220.25 , HORVU4Hr1G014220.9 , HORVU4Hr1G014220.8 , HORVU4Hr1G014220.3 , HORVU4Hr1G014220.1 , HORVU4Hr1G014220.7 , HORVU4Hr1G014220.6 , HORVU4Hr1G014220.5 , HORVU4Hr1G014220.4 , HORVU4Hr1G014220.21 , HORVU4Hr1G014220.2 , HORVU4Hr1G014220.19 , HORVU4Hr1G014220.18 , HORVU4Hr1G014220.12 , HORVU4Hr1G014220.11 , HORVU4Hr1G014220.10 , HORVU4Hr1G014220.17 , HORVU4Hr1G014220.16 , HORVU4Hr1G014220.15 , HORVU4Hr1G014220.14
Wheat TraesCS4B02G082700 , TraesCS4D02G080800 , TraesCS4D02G080800 , TraesCS4A02G233400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G327900 expressed protein -
2 Sobic.010G093200 expressed protein -
3 Sobic.001G123400 expressed protein -
4 Sobic.005G014500 esterase, putative, expressed -
5 Sobic.003G106800 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
6 Sobic.009G212900 myosin head family protein, expressed K10357: myosin V
7 Sobic.004G234000 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
8 Sobic.001G303300 exostosin family domain containing protein, expressed -
9 Sobic.008G072400 protein kinase family protein, putative, expressed -
10 Sobic.003G386350 - -
11 Sobic.004G145550 - -
12 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
13 Sobic.006G244200 OsFBDUF42 - F-box and DUF domain containing protein, expressed -
14 Sobic.001G124900 - -
15 Sobic.007G009900 - -
16 Sobic.001G005400 - -
17 Sobic.001G520600 DNA topoisomerase 2, putative, expressed -
18 Sobic.004G093000 protein kinase domain containing protein, putative, expressed -
19 Sobic.003G384750 - -
20 Sobic.009G096566 - -


Gene co-expression network
sample Sobic005G106700 Sobic005G106700 Sobic004G327900 Sobic004G327900 Sobic005G106700--Sobic004G327900 Sobic010G093200 Sobic010G093200 Sobic005G106700--Sobic010G093200 Sobic001G123400 Sobic001G123400 Sobic005G106700--Sobic001G123400 Sobic005G014500 Sobic005G014500 Sobic005G106700--Sobic005G014500 Sobic003G106800 Sobic003G106800 Sobic005G106700--Sobic003G106800 Sobic009G212900 Sobic009G212900 Sobic005G106700--Sobic009G212900 Sobic004G234000 Sobic004G234000 Sobic005G106700--Sobic004G234000 Sobic001G303300 Sobic001G303300 Sobic005G106700--Sobic001G303300 Sobic008G072400 Sobic008G072400 Sobic005G106700--Sobic008G072400 Sobic004G327900--Sobic005G106700 Sobic004G327900--Sobic004G234000 Sobic004G327900--Sobic001G123400 Sobic004G200100 Sobic004G200100 Sobic004G327900--Sobic004G200100 Sobic004G327900--Sobic009G212900 Sobic004G327900--Sobic003G106800 Sobic004G327900--Sobic010G093200 Sobic004G327900--Sobic005G014500 Sobic007G009900 Sobic007G009900 Sobic004G327900--Sobic007G009900 Sobic010G093200--Sobic001G123400 Sobic010G093200--Sobic001G303300 Sobic010G093200--Sobic005G106700 Sobic004G145550 Sobic004G145550 Sobic010G093200--Sobic004G145550 Sobic001G520600 Sobic001G520600 Sobic010G093200--Sobic001G520600 Sobic006G244200 Sobic006G244200 Sobic010G093200--Sobic006G244200 Sobic010G093200--Sobic004G327900 Sobic010G093200--Sobic003G106800 Sobic010G093200--Sobic008G072400 Sobic001G123400--Sobic010G093200 Sobic001G123400--Sobic007G009900 Sobic001G123400--Sobic004G327900 Sobic001G123400--Sobic001G520600 Sobic001G123400--Sobic009G212900 Sobic001G123400--Sobic005G106700 Sobic001G123400--Sobic004G234000 Sobic001G123400--Sobic004G145550 Sobic001G123400--Sobic004G200100 Sobic005G014500--Sobic005G106700 Sobic005G014500--Sobic004G327900 Sobic005G014500--Sobic010G093200 Sobic001G072400 Sobic001G072400 Sobic005G014500--Sobic001G072400 Sobic005G014500--Sobic001G303300 Sobic004G093000 Sobic004G093000 Sobic005G014500--Sobic004G093000 Sobic009G030501 Sobic009G030501 Sobic005G014500--Sobic009G030501 Sobic001G124900 Sobic001G124900 Sobic005G014500--Sobic001G124900 Sobic005G014500--Sobic004G234000 Sobic003G106800--Sobic005G106700 Sobic003G106800--Sobic009G212900 Sobic003G106800--Sobic004G327900 Sobic003G106800--Sobic001G123400 Sobic003G106800--Sobic010G093200 Sobic003G106800--Sobic004G200100 Sobic009G143600 Sobic009G143600 Sobic003G106800--Sobic009G143600 Sobic007G136000 Sobic007G136000 Sobic003G106800--Sobic007G136000 Sobic003G106800--Sobic001G124900 Sobic003G370800 Sobic003G370800 Sobic009G212900--Sobic003G370800 Sobic009G212900--Sobic007G009900 Sobic009G212900--Sobic009G143600 Sobic009G212900--Sobic001G123400 Sobic009G212900--Sobic004G200100 Sobic009G212900--Sobic003G106800 Sobic009G212900--Sobic004G327900 Sobic002G408400 Sobic002G408400 Sobic009G212900--Sobic002G408400 Sobic009G212900--Sobic005G106700 Sobic004G234000--Sobic004G200100 Sobic003G074300 Sobic003G074300 Sobic004G234000--Sobic003G074300 Sobic004G234000--Sobic004G327900 Sobic001G156200 Sobic001G156200 Sobic004G234000--Sobic001G156200 Sobic002G381800 Sobic002G381800 Sobic004G234000--Sobic002G381800 Sobic004G234000--Sobic001G123400 Sobic004G288000 Sobic004G288000 Sobic004G234000--Sobic004G288000 Sobic003G394000 Sobic003G394000 Sobic004G234000--Sobic003G394000 Sobic004G234000--Sobic007G009900 Sobic001G303300--Sobic010G093200 Sobic001G303300--Sobic005G106700 Sobic006G128233 Sobic006G128233 Sobic001G303300--Sobic006G128233 Sobic004G023800 Sobic004G023800 Sobic001G303300--Sobic004G023800 Sobic004G143550 Sobic004G143550 Sobic001G303300--Sobic004G143550 Sobic001G137050 Sobic001G137050 Sobic001G303300--Sobic001G137050 Sobic003G024450 Sobic003G024450 Sobic001G303300--Sobic003G024450 Sobic001G504300 Sobic001G504300 Sobic001G303300--Sobic001G504300 Sobic010G244800 Sobic010G244800 Sobic001G303300--Sobic010G244800 Sobic008G072400--Sobic005G106700 Sobic008G072400--Sobic010G093200 Sobic008G072400--Sobic003G106800 Sobic008G072400--Sobic004G327900 Sobic004G166600 Sobic004G166600 Sobic008G072400--Sobic004G166600 Sobic008G072400--Sobic009G212900 Sobic008G072400--Sobic006G244200 Sobic008G072400--Sobic004G145550 Sobic008G072400--Sobic001G123400
Octagon: transcription factors


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