Gene annotation
Transcriptome id Sobic.003G302600.1
Synonym ATCIPK6, CIPK6, Sb03g035160, CBL-interacting protein kinases, SbCIPK06, SNRK3.14, SIP3
Functional annotation Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7T2 , A0A1W0VZP2
Pfam PF03822 PF00069
Panther DB PTHR24347 PTHR24347:SF183
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K07198; PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
Gene Ontology GO:0007165; signal transduction GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G45820 : CBL-interacting protein kinase 20
RAP-DB (Rice) LOC_Os01g55440.1 : CAMK_KIN1/SNF1/Nim1_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a031165 , Zm00025a039984 , Zm00025a035878
Brachypodium KQK05416 , KQK09833
Barley HORVU4Hr1G021090.1 , HORVU4Hr1G021090.2 , HORVU3Hr1G073110.1 , HORVU3Hr1G073110.3 , HORVU3Hr1G073110.2 , HORVU6Hr1G054210.1 , HORVU6Hr1G054210.2 , HORVU6Hr1G054210.3 , HORVU1Hr1G076910.4 , HORVU1Hr1G076910.5 , HORVU1Hr1G076910.6 , HORVU1Hr1G076910.1 , HORVU1Hr1G076910.2 , HORVU1Hr1G076910.3 , HORVU5Hr1G065350.2 , HORVU5Hr1G065350.1
Wheat TraesCS3D02G295900 , TraesCS3A02G306000 , TraesCS3B02G330500
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G302600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G061600 RALFL11 - Rapid ALkalinization Factor RALF family protein precursor, putative -
2 Sobic.009G186900 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
3 Sobic.002G381800 - -
4 Sobic.003G216400 expressed protein -
5 Sobic.008G191900 CHX28, putative, expressed -
6 Sobic.010G279600 ZOS2-19 - C2H2 zinc finger protein, expressed -
7 Sobic.010G082300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
8 Sobic.004G008500 - -
9 Sobic.006G244100 OsFBDUF35 - F-box and DUF domain containing protein, expressed -
10 Sobic.010G126300 - -
11 Sobic.009G176200 expressed protein -
12 Sobic.010G016100 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
13 Sobic.003G287800 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
14 Sobic.010G063700 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
15 Sobic.005G001200 - -
16 Sobic.002G322500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.003G211000 - -
18 Sobic.004G031900 phosphatidylinositol transfer, putative, expressed -
19 Sobic.010G140700 peroxidase precursor, putative, expressed -
20 Sobic.001G152800 pollen preferential protein, putative, expressed -


Gene co-expression network
sample Sobic003G302600 Sobic003G302600 Sobic003G061600 Sobic003G061600 Sobic003G302600--Sobic003G061600 Sobic009G186900 Sobic009G186900 Sobic003G302600--Sobic009G186900 Sobic002G381800 Sobic002G381800 Sobic003G302600--Sobic002G381800 Sobic003G216400 Sobic003G216400 Sobic003G302600--Sobic003G216400 Sobic008G191900 Sobic008G191900 Sobic003G302600--Sobic008G191900 Sobic010G279600 Sobic010G279600 Sobic003G302600--Sobic010G279600 Sobic010G082300 Sobic010G082300 Sobic003G302600--Sobic010G082300 Sobic004G008500 Sobic004G008500 Sobic003G302600--Sobic004G008500 Sobic006G244100 Sobic006G244100 Sobic003G302600--Sobic006G244100 Sobic003G061600--Sobic008G191900 Sobic009G176200 Sobic009G176200 Sobic003G061600--Sobic009G176200 Sobic003G061600--Sobic006G244100 Sobic010G063700 Sobic010G063700 Sobic003G061600--Sobic010G063700 Sobic010G016100 Sobic010G016100 Sobic003G061600--Sobic010G016100 Sobic003G061600--Sobic004G008500 Sobic002G029000 Sobic002G029000 Sobic003G061600--Sobic002G029000 Sobic010G187800 Sobic010G187800 Sobic003G061600--Sobic010G187800 Sobic010G276200 Sobic010G276200 Sobic003G061600--Sobic010G276200 Sobic010G126300 Sobic010G126300 Sobic009G186900--Sobic010G126300 Sobic003G287800 Sobic003G287800 Sobic009G186900--Sobic003G287800 Sobic008G129800 Sobic008G129800 Sobic009G186900--Sobic008G129800 Sobic009G186900--Sobic003G216400 Sobic005G001200 Sobic005G001200 Sobic009G186900--Sobic005G001200 Sobic002G322500 Sobic002G322500 Sobic009G186900--Sobic002G322500 Sobic003G322000 Sobic003G322000 Sobic009G186900--Sobic003G322000 Sobic004G163900 Sobic004G163900 Sobic009G186900--Sobic004G163900 Sobic002G122500 Sobic002G122500 Sobic009G186900--Sobic002G122500 Sobic002G381800--Sobic010G082300 Sobic002G381800--Sobic003G302600 Sobic002G381800--Sobic009G176200 Sobic001G005400 Sobic001G005400 Sobic002G381800--Sobic001G005400 Sobic002G381800--Sobic003G061600 Sobic004G252850 Sobic004G252850 Sobic002G381800--Sobic004G252850 Sobic004G348000 Sobic004G348000 Sobic002G381800--Sobic004G348000 Sobic003G211000 Sobic003G211000 Sobic002G381800--Sobic003G211000 Sobic009G170900 Sobic009G170900 Sobic002G381800--Sobic009G170900 Sobic003G216400--Sobic009G186900 Sobic002G236800 Sobic002G236800 Sobic003G216400--Sobic002G236800 Sobic003G193600 Sobic003G193600 Sobic003G216400--Sobic003G193600 Sobic007G051200 Sobic007G051200 Sobic003G216400--Sobic007G051200 Sobic003G216400--Sobic006G244100 Sobic005G054501 Sobic005G054501 Sobic003G216400--Sobic005G054501 Sobic002G165900 Sobic002G165900 Sobic003G216400--Sobic002G165900 Sobic002G305800 Sobic002G305800 Sobic003G216400--Sobic002G305800 Sobic003G216400--Sobic003G287800 Sobic002G359100 Sobic002G359100 Sobic008G191900--Sobic002G359100 Sobic008G191900--Sobic003G061600 Sobic004G031900 Sobic004G031900 Sobic008G191900--Sobic004G031900 Sobic001G380000 Sobic001G380000 Sobic008G191900--Sobic001G380000 Sobic008G191900--Sobic010G187800 Sobic008G191900--Sobic009G176200 Sobic003G233800 Sobic003G233800 Sobic008G191900--Sobic003G233800 Sobic001G036200 Sobic001G036200 Sobic008G191900--Sobic001G036200 Sobic010G140100 Sobic010G140100 Sobic008G191900--Sobic010G140100 Sobic010G279600--Sobic004G008500 Sobic010G279600--Sobic010G063700 Sobic001G152800 Sobic001G152800 Sobic010G279600--Sobic001G152800 Sobic010G261900 Sobic010G261900 Sobic010G279600--Sobic010G261900 Sobic007G166500 Sobic007G166500 Sobic010G279600--Sobic007G166500 Sobic010G279600--Sobic010G016100 Sobic001G445400 Sobic001G445400 Sobic010G279600--Sobic001G445400 Sobic010G279600--Sobic002G029000 Sobic004G289100 Sobic004G289100 Sobic010G279600--Sobic004G289100 Sobic010G082300--Sobic002G381800 Sobic010G082300--Sobic004G348000 Sobic010G082300--Sobic004G252850 Sobic010G082300--Sobic009G176200 Sobic003G307500 Sobic003G307500 Sobic010G082300--Sobic003G307500 Sobic009G125100 Sobic009G125100 Sobic010G082300--Sobic009G125100 Sobic001G251000 Sobic001G251000 Sobic010G082300--Sobic001G251000 Sobic010G082300--Sobic004G031900 Sobic003G054800 Sobic003G054800 Sobic010G082300--Sobic003G054800 Sobic004G008500--Sobic010G063700 Sobic004G008500--Sobic001G152800 Sobic004G008500--Sobic001G445400 Sobic004G008500--Sobic010G016100 Sobic008G138100 Sobic008G138100 Sobic004G008500--Sobic008G138100 Sobic004G008500--Sobic007G166500 Sobic004G008500--Sobic010G279600 Sobic010G140700 Sobic010G140700 Sobic004G008500--Sobic010G140700 Sobic004G008500--Sobic002G029000 Sobic010G246132 Sobic010G246132 Sobic006G244100--Sobic010G246132 Sobic004G334900 Sobic004G334900 Sobic006G244100--Sobic004G334900 Sobic006G105500 Sobic006G105500 Sobic006G244100--Sobic006G105500 Sobic010G257700 Sobic010G257700 Sobic006G244100--Sobic010G257700 Sobic004G359900 Sobic004G359900 Sobic006G244100--Sobic004G359900 Sobic010G151575 Sobic010G151575 Sobic006G244100--Sobic010G151575 Sobic002G224000 Sobic002G224000 Sobic006G244100--Sobic002G224000 Sobic004G197200 Sobic004G197200 Sobic006G244100--Sobic004G197200 Sobic002G121800 Sobic002G121800 Sobic006G244100--Sobic002G121800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.