Gene annotation
Transcriptome id Sobic.001G057900.1
Synonym Sb01g005270
Functional annotation transmembrane BAX inhibitor motif-containing protein, putative, expressed
UniProt C5WX80
Pfam PF01027
Panther DB PTHR23291 PTHR23291:SF44
NCBI CDD KOG2322; N-methyl-D-aspartate receptor glutamate-binding subunit
KEGG Orthology K06890; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03070 : Bax inhibitor-1 family protein
RAP-DB (Rice) LOC_Os03g58140.1 : transmembrane BAX inhibitor motif-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a008117 , Zm00025a016822 , Zm00025a008555
Brachypodium KQK13246 , KQK12716
Barley HORVU5Hr1G105760.2 , HORVU5Hr1G105760.1 , HORVU3Hr1G104710.2 , HORVU3Hr1G104710.1 , HORVU3Hr1G104660.2 , HORVU5Hr1G044320.1 , HORVU3Hr1G104660.1 , HORVU5Hr1G037150.1 , HORVU5Hr1G094490.1 , HORVU5Hr1G094490.2
Wheat TraesCS5D02G393600 , TraesCS5D02G444900 , TraesCS5B02G388900 , TraesCS5A02G437700 , TraesCS5A02G384100 , TraesCS5B02G440500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G074300 expressed protein -
2 Sobic.001G156200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.005G067200 expressed protein -
4 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
5 Sobic.003G403000 "major aluminum tolerance, s a plasma membrane anion efflux transporter responsible for citrate release into the rhizosphere"(PubMedID : 17721535)@Aluminum tolerance(PubMedID : 17721535)@MATE efflux protein, putative, expressed -
6 Sobic.004G234000 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
7 Sobic.001G407300 expressed protein -
8 Sobic.004G218200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CPuORF40 - conserved peptide uORF-containing transcript, expressed -
9 Sobic.010G279600 ZOS2-19 - C2H2 zinc finger protein, expressed -
10 Sobic.010G039700 pollen-specific protein, putative, expressed -
11 Sobic.002G083100 cadmium/zinc-transporting ATPase, putative, expressed K01534: Zn2+/Cd2+-exporting ATPase
12 Sobic.002G408400 beta-amylase, putative, expressed -
13 Sobic.009G044200 C2 domain containing protein, putative, expressed -
14 Sobic.003G370800 aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
15 Sobic.007G009900 - -
16 Sobic.010G032200 expressed protein -
17 Sobic.005G027250 - -
18 Sobic.009G143600 clathrin assembly protein, putative, expressed -
19 Sobic.004G014900 csAtPR5, putative, expressed -
20 Sobic.006G099200 pollen allergen Cyn d 23, putative, expressed -


Gene co-expression network
sample Sobic001G057900 Sobic001G057900 Sobic003G074300 Sobic003G074300 Sobic001G057900--Sobic003G074300 Sobic001G156200 Sobic001G156200 Sobic001G057900--Sobic001G156200 Sobic005G067200 Sobic005G067200 Sobic001G057900--Sobic005G067200 Sobic004G200100 Sobic004G200100 Sobic001G057900--Sobic004G200100 Sobic003G403000 Sobic003G403000 Sobic001G057900--Sobic003G403000 Sobic004G234000 Sobic004G234000 Sobic001G057900--Sobic004G234000 Sobic001G407300 Sobic001G407300 Sobic001G057900--Sobic001G407300 Sobic004G218200 Sobic004G218200 Sobic001G057900--Sobic004G218200 Sobic010G279600 Sobic010G279600 Sobic001G057900--Sobic010G279600 Sobic003G074300--Sobic001G057900 Sobic003G074300--Sobic004G234000 Sobic003G074300--Sobic001G156200 Sobic003G074300--Sobic004G200100 Sobic003G074300--Sobic005G067200 Sobic010G039700 Sobic010G039700 Sobic003G074300--Sobic010G039700 Sobic003G370800 Sobic003G370800 Sobic003G074300--Sobic003G370800 Sobic003G074300--Sobic001G407300 Sobic007G195900 Sobic007G195900 Sobic003G074300--Sobic007G195900 Sobic001G156200--Sobic004G234000 Sobic001G156200--Sobic001G057900 Sobic001G156200--Sobic003G074300 Sobic004G355900 Sobic004G355900 Sobic001G156200--Sobic004G355900 Sobic002G083100 Sobic002G083100 Sobic001G156200--Sobic002G083100 Sobic004G014900 Sobic004G014900 Sobic001G156200--Sobic004G014900 Sobic004G255100 Sobic004G255100 Sobic001G156200--Sobic004G255100 Sobic001G156200--Sobic004G200100 Sobic001G003400 Sobic001G003400 Sobic001G156200--Sobic001G003400 Sobic005G067200--Sobic003G403000 Sobic007G136000 Sobic007G136000 Sobic005G067200--Sobic007G136000 Sobic002G068701 Sobic002G068701 Sobic005G067200--Sobic002G068701 Sobic009G044200 Sobic009G044200 Sobic005G067200--Sobic009G044200 Sobic005G067200--Sobic004G218200 Sobic004G281500 Sobic004G281500 Sobic005G067200--Sobic004G281500 Sobic005G067200--Sobic001G407300 Sobic005G067200--Sobic010G279600 Sobic005G067200--Sobic004G200100 Sobic003G394000 Sobic003G394000 Sobic004G200100--Sobic003G394000 Sobic009G170900 Sobic009G170900 Sobic004G200100--Sobic009G170900 Sobic004G200100--Sobic007G136000 Sobic004G200100--Sobic004G234000 Sobic002G381800 Sobic002G381800 Sobic004G200100--Sobic002G381800 Sobic005G160801 Sobic005G160801 Sobic004G200100--Sobic005G160801 Sobic010G082300 Sobic010G082300 Sobic004G200100--Sobic010G082300 Sobic004G060400 Sobic004G060400 Sobic004G200100--Sobic004G060400 Sobic004G348000 Sobic004G348000 Sobic004G200100--Sobic004G348000 Sobic003G403000--Sobic005G067200 Sobic003G403000--Sobic009G044200 Sobic003G403000--Sobic002G068701 Sobic010G200600 Sobic010G200600 Sobic003G403000--Sobic010G200600 Sobic004G289100 Sobic004G289100 Sobic003G403000--Sobic004G289100 Sobic005G027250 Sobic005G027250 Sobic003G403000--Sobic005G027250 Sobic009G030001 Sobic009G030001 Sobic003G403000--Sobic009G030001 Sobic003G403000--Sobic004G218200 Sobic003G403000--Sobic004G281500 Sobic004G234000--Sobic004G200100 Sobic004G234000--Sobic003G074300 Sobic004G327900 Sobic004G327900 Sobic004G234000--Sobic004G327900 Sobic004G234000--Sobic001G156200 Sobic004G234000--Sobic002G381800 Sobic001G123400 Sobic001G123400 Sobic004G234000--Sobic001G123400 Sobic004G288000 Sobic004G288000 Sobic004G234000--Sobic004G288000 Sobic004G234000--Sobic003G394000 Sobic007G009900 Sobic007G009900 Sobic004G234000--Sobic007G009900 Sobic010G261900 Sobic010G261900 Sobic001G407300--Sobic010G261900 Sobic001G407300--Sobic010G279600 Sobic001G407300--Sobic004G289100 Sobic001G407300--Sobic004G281500 Sobic001G407300--Sobic009G044200 Sobic001G152800 Sobic001G152800 Sobic001G407300--Sobic001G152800 Sobic004G008500 Sobic004G008500 Sobic001G407300--Sobic004G008500 Sobic001G407300--Sobic005G067200 Sobic003G211000 Sobic003G211000 Sobic001G407300--Sobic003G211000 Sobic004G218200--Sobic010G200600 Sobic004G218200--Sobic005G067200 Sobic004G218200--Sobic003G403000 Sobic004G218200--Sobic007G195900 Sobic005G152550 Sobic005G152550 Sobic004G218200--Sobic005G152550 Sobic010G037701 Sobic010G037701 Sobic004G218200--Sobic010G037701 Sobic003G154900 Sobic003G154900 Sobic004G218200--Sobic003G154900 Sobic004G218200--Sobic007G136000 Sobic002G084200 Sobic002G084200 Sobic004G218200--Sobic002G084200 Sobic010G279600--Sobic004G008500 Sobic010G063700 Sobic010G063700 Sobic010G279600--Sobic010G063700 Sobic010G279600--Sobic001G152800 Sobic010G279600--Sobic010G261900 Sobic007G166500 Sobic007G166500 Sobic010G279600--Sobic007G166500 Sobic010G016100 Sobic010G016100 Sobic010G279600--Sobic010G016100 Sobic001G445400 Sobic001G445400 Sobic010G279600--Sobic001G445400 Sobic002G029000 Sobic002G029000 Sobic010G279600--Sobic002G029000 Sobic010G279600--Sobic004G289100
Octagon: transcription factors


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