Gene annotation
Transcriptome id Sobic.004G218200.3
Synonym Sb04g026330, SbSAUR37;small auxin up RNA, SbSAUR37, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database" (PubMedID : 20499123)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
CPuORF40 - conserved peptide uORF-containing transcript, expressed
UniProt C5XXR7
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF57
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT2G46690 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os10g36703.1 : CPuORF40 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a032002
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G200600 nitrate-induced NOI protein, expressed -
2 Sobic.005G067200 expressed protein -
3 Sobic.003G403000 "major aluminum tolerance, s a plasma membrane anion efflux transporter responsible for citrate release into the rhizosphere"(PubMedID : 17721535)@Aluminum tolerance(PubMedID : 17721535)@MATE efflux protein, putative, expressed -
4 Sobic.007G195900 expressed protein -
5 Sobic.005G152550 - -
6 Sobic.010G037701 - -
7 Sobic.003G154900 - -
8 Sobic.007G136000 - -
9 Sobic.002G084200 - -
10 Sobic.001G057900 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
11 Sobic.002G156800 expressed protein -
12 Sobic.001G407300 expressed protein -
13 Sobic.003G144100 - -
14 Sobic.010G039700 pollen-specific protein, putative, expressed -
15 Sobic.002G068701 - K00472: prolyl 4-hydroxylase
16 Sobic.003G074300 expressed protein -
17 Sobic.002G017100 OsFBL33 - F-box domain and LRR containing protein, expressed -
18 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
19 Sobic.008G181701 - -
20 Sobic.009G044200 C2 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G218200 Sobic004G218200 Sobic010G200600 Sobic010G200600 Sobic004G218200--Sobic010G200600 Sobic005G067200 Sobic005G067200 Sobic004G218200--Sobic005G067200 Sobic003G403000 Sobic003G403000 Sobic004G218200--Sobic003G403000 Sobic007G195900 Sobic007G195900 Sobic004G218200--Sobic007G195900 Sobic005G152550 Sobic005G152550 Sobic004G218200--Sobic005G152550 Sobic010G037701 Sobic010G037701 Sobic004G218200--Sobic010G037701 Sobic003G154900 Sobic003G154900 Sobic004G218200--Sobic003G154900 Sobic007G136000 Sobic007G136000 Sobic004G218200--Sobic007G136000 Sobic002G084200 Sobic002G084200 Sobic004G218200--Sobic002G084200 Sobic010G200600--Sobic002G084200 Sobic010G200600--Sobic003G154900 Sobic002G156800 Sobic002G156800 Sobic010G200600--Sobic002G156800 Sobic010G200600--Sobic004G218200 Sobic010G200600--Sobic003G403000 Sobic010G200600--Sobic005G067200 Sobic002G221500 Sobic002G221500 Sobic010G200600--Sobic002G221500 Sobic002G068701 Sobic002G068701 Sobic010G200600--Sobic002G068701 Sobic002G017100 Sobic002G017100 Sobic010G200600--Sobic002G017100 Sobic005G067200--Sobic003G403000 Sobic005G067200--Sobic007G136000 Sobic005G067200--Sobic002G068701 Sobic009G044200 Sobic009G044200 Sobic005G067200--Sobic009G044200 Sobic005G067200--Sobic004G218200 Sobic004G281500 Sobic004G281500 Sobic005G067200--Sobic004G281500 Sobic001G407300 Sobic001G407300 Sobic005G067200--Sobic001G407300 Sobic010G279600 Sobic010G279600 Sobic005G067200--Sobic010G279600 Sobic004G200100 Sobic004G200100 Sobic005G067200--Sobic004G200100 Sobic003G403000--Sobic005G067200 Sobic003G403000--Sobic009G044200 Sobic003G403000--Sobic002G068701 Sobic003G403000--Sobic010G200600 Sobic004G289100 Sobic004G289100 Sobic003G403000--Sobic004G289100 Sobic005G027250 Sobic005G027250 Sobic003G403000--Sobic005G027250 Sobic009G030001 Sobic009G030001 Sobic003G403000--Sobic009G030001 Sobic003G403000--Sobic004G218200 Sobic003G403000--Sobic004G281500 Sobic007G195900--Sobic010G037701 Sobic007G195900--Sobic004G218200 Sobic003G074300 Sobic003G074300 Sobic007G195900--Sobic003G074300 Sobic003G144100 Sobic003G144100 Sobic007G195900--Sobic003G144100 Sobic007G195900--Sobic001G407300 Sobic007G195900--Sobic005G067200 Sobic003G106800 Sobic003G106800 Sobic007G195900--Sobic003G106800 Sobic001G330775 Sobic001G330775 Sobic007G195900--Sobic001G330775 Sobic001G057900 Sobic001G057900 Sobic007G195900--Sobic001G057900 Sobic007G139850 Sobic007G139850 Sobic005G152550--Sobic007G139850 Sobic009G021050 Sobic009G021050 Sobic005G152550--Sobic009G021050 Sobic004G150901 Sobic004G150901 Sobic005G152550--Sobic004G150901 Sobic008G084000 Sobic008G084000 Sobic005G152550--Sobic008G084000 Sobic010G138600 Sobic010G138600 Sobic005G152550--Sobic010G138600 Sobic009G253600 Sobic009G253600 Sobic005G152550--Sobic009G253600 Sobic008G181701 Sobic008G181701 Sobic005G152550--Sobic008G181701 Sobic005G152550--Sobic003G403000 Sobic008G074200 Sobic008G074200 Sobic005G152550--Sobic008G074200 Sobic010G037701--Sobic007G195900 Sobic010G037701--Sobic004G218200 Sobic010G037701--Sobic007G136000 Sobic010G037701--Sobic007G139850 Sobic010G037701--Sobic009G021050 Sobic010G037701--Sobic004G150901 Sobic010G037701--Sobic005G152550 Sobic010G037701--Sobic010G138600 Sobic010G037701--Sobic009G253600 Sobic003G154900--Sobic002G156800 Sobic003G154900--Sobic002G084200 Sobic003G154900--Sobic010G200600 Sobic003G154900--Sobic002G017100 Sobic003G154900--Sobic002G221500 Sobic003G154900--Sobic004G218200 Sobic003G154900--Sobic003G403000 Sobic003G411500 Sobic003G411500 Sobic003G154900--Sobic003G411500 Sobic009G258700 Sobic009G258700 Sobic003G154900--Sobic009G258700 Sobic009G170900 Sobic009G170900 Sobic007G136000--Sobic009G170900 Sobic005G160801 Sobic005G160801 Sobic007G136000--Sobic005G160801 Sobic007G136000--Sobic004G200100 Sobic007G136000--Sobic005G067200 Sobic003G078000 Sobic003G078000 Sobic007G136000--Sobic003G078000 Sobic006G189600 Sobic006G189600 Sobic007G136000--Sobic006G189600 Sobic003G406060 Sobic003G406060 Sobic007G136000--Sobic003G406060 Sobic005G198600 Sobic005G198600 Sobic007G136000--Sobic005G198600 Sobic003G394000 Sobic003G394000 Sobic007G136000--Sobic003G394000 Sobic002G084200--Sobic002G156800 Sobic002G084200--Sobic003G154900 Sobic002G084200--Sobic010G200600 Sobic002G084200--Sobic002G221500 Sobic002G084200--Sobic009G258700 Sobic002G084200--Sobic002G017100 Sobic002G084200--Sobic004G218200 Sobic002G084200--Sobic003G411500 Sobic003G014832 Sobic003G014832 Sobic002G084200--Sobic003G014832
Octagon: transcription factors


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