Gene annotation
Transcriptome id Sobic.003G154900.1
Synonym
Functional annotation -
UniProt A0A1B6Q3D9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G156800 expressed protein -
2 Sobic.002G084200 - -
3 Sobic.010G200600 nitrate-induced NOI protein, expressed -
4 Sobic.002G017100 OsFBL33 - F-box domain and LRR containing protein, expressed -
5 Sobic.002G221500 ANTH domain containing protein, expressed -
6 Sobic.004G218200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CPuORF40 - conserved peptide uORF-containing transcript, expressed -
7 Sobic.003G403000 "major aluminum tolerance, s a plasma membrane anion efflux transporter responsible for citrate release into the rhizosphere"(PubMedID : 17721535)@Aluminum tolerance(PubMedID : 17721535)@MATE efflux protein, putative, expressed -
8 Sobic.003G411500 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
9 Sobic.009G258700 SCP-like extracellular protein, expressed -
10 Sobic.003G014832 - -
11 Sobic.005G152550 - -
12 Sobic.005G098501 - -
13 Sobic.005G214900 cytochrome P450, putative, expressed -
14 Sobic.005G067200 expressed protein -
15 Sobic.003G144100 - -
16 Sobic.002G068701 - K00472: prolyl 4-hydroxylase
17 Sobic.010G032200 expressed protein -
18 Sobic.006G138700 - -
19 Sobic.004G087750 - -
20 Sobic.009G174200 S-domain receptor-like protein kinase, putative, expressed -


Gene co-expression network
sample Sobic003G154900 Sobic003G154900 Sobic002G156800 Sobic002G156800 Sobic003G154900--Sobic002G156800 Sobic002G084200 Sobic002G084200 Sobic003G154900--Sobic002G084200 Sobic010G200600 Sobic010G200600 Sobic003G154900--Sobic010G200600 Sobic002G017100 Sobic002G017100 Sobic003G154900--Sobic002G017100 Sobic002G221500 Sobic002G221500 Sobic003G154900--Sobic002G221500 Sobic004G218200 Sobic004G218200 Sobic003G154900--Sobic004G218200 Sobic003G403000 Sobic003G403000 Sobic003G154900--Sobic003G403000 Sobic003G411500 Sobic003G411500 Sobic003G154900--Sobic003G411500 Sobic009G258700 Sobic009G258700 Sobic003G154900--Sobic009G258700 Sobic002G156800--Sobic002G084200 Sobic002G156800--Sobic002G221500 Sobic002G156800--Sobic003G154900 Sobic002G156800--Sobic010G200600 Sobic002G156800--Sobic009G258700 Sobic002G156800--Sobic003G411500 Sobic003G014832 Sobic003G014832 Sobic002G156800--Sobic003G014832 Sobic006G138700 Sobic006G138700 Sobic002G156800--Sobic006G138700 Sobic002G156800--Sobic002G017100 Sobic002G084200--Sobic002G156800 Sobic002G084200--Sobic003G154900 Sobic002G084200--Sobic010G200600 Sobic002G084200--Sobic002G221500 Sobic002G084200--Sobic009G258700 Sobic002G084200--Sobic002G017100 Sobic002G084200--Sobic004G218200 Sobic002G084200--Sobic003G411500 Sobic002G084200--Sobic003G014832 Sobic010G200600--Sobic002G084200 Sobic010G200600--Sobic003G154900 Sobic010G200600--Sobic002G156800 Sobic010G200600--Sobic004G218200 Sobic010G200600--Sobic003G403000 Sobic005G067200 Sobic005G067200 Sobic010G200600--Sobic005G067200 Sobic010G200600--Sobic002G221500 Sobic002G068701 Sobic002G068701 Sobic010G200600--Sobic002G068701 Sobic010G200600--Sobic002G017100 Sobic001G165401 Sobic001G165401 Sobic002G017100--Sobic001G165401 Sobic002G017100--Sobic003G154900 Sobic002G017100--Sobic010G200600 Sobic002G017100--Sobic002G156800 Sobic002G017100--Sobic003G411500 Sobic002G017100--Sobic002G084200 Sobic002G017100--Sobic002G221500 Sobic002G017100--Sobic003G403000 Sobic002G017100--Sobic009G258700 Sobic002G221500--Sobic002G156800 Sobic002G221500--Sobic009G258700 Sobic006G077100 Sobic006G077100 Sobic002G221500--Sobic006G077100 Sobic002G221500--Sobic006G138700 Sobic002G221500--Sobic002G084200 Sobic002G221500--Sobic003G411500 Sobic002G069232 Sobic002G069232 Sobic002G221500--Sobic002G069232 Sobic009G237900 Sobic009G237900 Sobic002G221500--Sobic009G237900 Sobic008G116900 Sobic008G116900 Sobic002G221500--Sobic008G116900 Sobic004G218200--Sobic010G200600 Sobic004G218200--Sobic005G067200 Sobic004G218200--Sobic003G403000 Sobic007G195900 Sobic007G195900 Sobic004G218200--Sobic007G195900 Sobic005G152550 Sobic005G152550 Sobic004G218200--Sobic005G152550 Sobic010G037701 Sobic010G037701 Sobic004G218200--Sobic010G037701 Sobic004G218200--Sobic003G154900 Sobic007G136000 Sobic007G136000 Sobic004G218200--Sobic007G136000 Sobic004G218200--Sobic002G084200 Sobic003G403000--Sobic005G067200 Sobic009G044200 Sobic009G044200 Sobic003G403000--Sobic009G044200 Sobic003G403000--Sobic002G068701 Sobic003G403000--Sobic010G200600 Sobic004G289100 Sobic004G289100 Sobic003G403000--Sobic004G289100 Sobic005G027250 Sobic005G027250 Sobic003G403000--Sobic005G027250 Sobic009G030001 Sobic009G030001 Sobic003G403000--Sobic009G030001 Sobic003G403000--Sobic004G218200 Sobic004G281500 Sobic004G281500 Sobic003G403000--Sobic004G281500 Sobic003G411500--Sobic002G221500 Sobic003G411500--Sobic006G077100 Sobic003G411500--Sobic002G156800 Sobic003G411500--Sobic009G258700 Sobic003G411500--Sobic006G138700 Sobic003G323750 Sobic003G323750 Sobic003G411500--Sobic003G323750 Sobic006G102600 Sobic006G102600 Sobic003G411500--Sobic006G102600 Sobic006G077900 Sobic006G077900 Sobic003G411500--Sobic006G077900 Sobic002G277366 Sobic002G277366 Sobic003G411500--Sobic002G277366 Sobic009G258700--Sobic006G138700 Sobic009G258700--Sobic002G221500 Sobic009G258700--Sobic002G069232 Sobic009G258700--Sobic006G077100 Sobic009G258700--Sobic009G237900 Sobic004G133800 Sobic004G133800 Sobic009G258700--Sobic004G133800 Sobic009G258700--Sobic008G116900 Sobic009G239000 Sobic009G239000 Sobic009G258700--Sobic009G239000 Sobic002G349800 Sobic002G349800 Sobic009G258700--Sobic002G349800
Octagon: transcription factors


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